RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 BRWD1-AS2P59051 145 aa10.71□□□□□ -0.7
TRIO-222ENST00000515144 NEXN-AS1Q8NBZ9 246 aa10.7□□□□□ -0.7
TRIO-222ENST00000515144 Q6ZVH6 145 aa10.7□□□□□ -0.7
TRIO-222ENST00000515144 IGKV3D-7A0A0C4DH55 119 aa10.7□□□□□ -0.7
TRIO-222ENST00000515144 CRYGBP07316 175 aa10.7□□□□□ -0.7
TRIO-222ENST00000515144 IGKV2D-26A0A0A0MRZ7 120 aa10.69□□□□□ -0.7
TRIO-222ENST00000515144 PPDPFQ9H3Y8 114 aa10.69□□□□□ -0.7
TRIO-222ENST00000515144 NFE4Q86UQ8 179 aa10.69□□□□□ -0.7
TRIO-222ENST00000515144 DLEU1O43261 78 aa10.69□□□□□ -0.7
TRIO-222ENST00000515144 LYPD6Q86Y78 171 aa10.69□□□□□ -0.7
TRIO-222ENST00000515144 C9orf85Q96MD7 179 aa10.69□□□□□ -0.7
TRIO-222ENST00000515144 NPSP0C0P6 89 aa10.69□□□□□ -0.7
TRIO-222ENST00000515144 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
TRIO-222ENST00000515144 ANKRD29Q8N6D5 301 aa10.69□□□□□ -0.7
TRIO-222ENST00000515144 NTN5Q8WTR8 489 aaPredicted RBP10.69□□□□□ -0.7
TRIO-222ENST00000515144 NREPQ16612 68 aa10.68□□□□□ -0.7
TRIO-222ENST00000515144 CDPF1Q6NVV7 123 aa10.68□□□□□ -0.7
TRIO-222ENST00000515144 RPL37AP8A6NKH3 93 aa10.68□□□□□ -0.7
TRIO-222ENST00000515144 TDRG1Q3Y452 100 aa10.68□□□□□ -0.7
TRIO-222ENST00000515144 A0A0C4DFX4 3053 aa10.68□□□□□ -0.7
TRIO-222ENST00000515144 TRBV6-8A0A0A6YYG3 113 aa10.67□□□□□ -0.7
TRIO-222ENST00000515144 CITED1Q99966 193 aa10.67□□□□□ -0.7
TRIO-222ENST00000515144 ANKRD39Q53RE8 183 aa10.67□□□□□ -0.7
TRIO-222ENST00000515144 C10orf91Q5T1B1 145 aa10.67□□□□□ -0.7
TRIO-222ENST00000515144 UBE2D4Q9Y2X8 147 aa10.67□□□□□ -0.7
TRIO-222ENST00000515144 G3V4G9 280 aa10.67□□□□□ -0.7
TRIO-222ENST00000515144 FASNP49327 2511 aaKnown RBP10.66□□□□□ -0.7
TRIO-222ENST00000515144 CXCL5P42830 114 aa10.66□□□□□ -0.7
TRIO-222ENST00000515144 LINC00574Q9H8X3 128 aa10.66□□□□□ -0.7
TRIO-222ENST00000515144 NDUFS6O75380 124 aaKnown RBP10.66□□□□□ -0.7
TRIO-222ENST00000515144 IGLV2-8P01709 118 aa10.66□□□□□ -0.7
TRIO-222ENST00000515144 A0A1W2PPR1 153 aa10.66□□□□□ -0.7
TRIO-222ENST00000515144 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.7
TRIO-222ENST00000515144 MED14OSP0DP75 135 aa10.65□□□□□ -0.7
TRIO-222ENST00000515144 PPDPFLQ8WWR9 84 aa10.65□□□□□ -0.7
TRIO-222ENST00000515144 F8W1H4 67 aa10.65□□□□□ -0.7
TRIO-222ENST00000515144 SPINK6Q6UWN8 80 aa10.65□□□□□ -0.7
TRIO-222ENST00000515144 POLQO75417 2590 aa10.65□□□□□ -0.7
TRIO-222ENST00000515144 IGKV4-1P06312 121 aa10.64□□□□□ -0.71
TRIO-222ENST00000515144 COX7BP24311 80 aa10.64□□□□□ -0.71
TRIO-222ENST00000515144 CRIP3Q6Q6R5 217 aa10.64□□□□□ -0.71
TRIO-222ENST00000515144 UNC80Q8N2C7 3258 aa10.64□□□□□ -0.71
TRIO-222ENST00000515144 ZNF295-AS1Q8N0V1 137 aa10.63□□□□□ -0.71
TRIO-222ENST00000515144 IGLV9-49A0A0B4J1Y8 123 aa10.63□□□□□ -0.71
TRIO-222ENST00000515144 C5orf47Q569G3 176 aa10.63□□□□□ -0.71
TRIO-222ENST00000515144 CRIP1P50238 77 aa10.63□□□□□ -0.71
TRIO-222ENST00000515144 C20orf203Q8NBC4 194 aa10.62□□□□□ -0.71
TRIO-222ENST00000515144 PIK3CD-AS1Q5SR53 167 aa10.62□□□□□ -0.71
TRIO-222ENST00000515144 CHD7Q9P2D1 2997 aa10.62□□□□□ -0.71
TRIO-222ENST00000515144 UBE2D3P61077 147 aa10.61□□□□□ -0.71
TRIO-222ENST00000515144 EBI3Q14213 229 aa10.61□□□□□ -0.71
TRIO-222ENST00000515144 K7EP34 96 aa10.61□□□□□ -0.71
TRIO-222ENST00000515144 SLPIP03973 132 aa10.61□□□□□ -0.71
TRIO-222ENST00000515144 K7EP13 123 aa10.61□□□□□ -0.71
TRIO-222ENST00000515144 MBD6Q96DN6 1003 aa10.61□□□□□ -0.71
TRIO-222ENST00000515144 ACANP16112 2415 aa10.6□□□□□ -0.71
TRIO-222ENST00000515144 C19orf71A6NCJ1 209 aa10.6□□□□□ -0.71
TRIO-222ENST00000515144 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
TRIO-222ENST00000515144 USP9XQ93008 2570 aaPredicted RBP10.6□□□□□ -0.71
TRIO-222ENST00000515144 RBM3P98179 157 aaKnown RBP10.6□□□□□ -0.71
TRIO-222ENST00000515144 ODF1Q14990 250 aa10.6□□□□□ -0.71
TRIO-222ENST00000515144 IGLV2-11P01706 119 aa10.6□□□□□ -0.71
TRIO-222ENST00000515144 IFITM1P13164 125 aa10.6□□□□□ -0.71
TRIO-222ENST00000515144 UFSP1Q6NVU6 142 aa10.6□□□□□ -0.71
TRIO-222ENST00000515144 CDKN2A-AS1Q9UH64 79 aa10.6□□□□□ -0.71
TRIO-222ENST00000515144 EIF4EBP1Q13541 118 aaPredicted RBP10.59□□□□□ -0.71
TRIO-222ENST00000515144 NUPR2A6NF83 97 aa10.59□□□□□ -0.71
TRIO-222ENST00000515144 FXYD2P54710 66 aa10.59□□□□□ -0.71
TRIO-222ENST00000515144 E9PLD3 99 aa10.59□□□□□ -0.71
TRIO-222ENST00000515144 U3KQK5 164 aa10.59□□□□□ -0.71
TRIO-222ENST00000515144 A8MZ25 164 aa10.59□□□□□ -0.71
TRIO-222ENST00000515144 WFDC9Q8NEX5 89 aa10.59□□□□□ -0.71
TRIO-222ENST00000515144 FSTL3O95633 263 aa10.58□□□□□ -0.72
TRIO-222ENST00000515144 H0YGX0 51 aa10.58□□□□□ -0.72
TRIO-222ENST00000515144 PRR9Q5T870 116 aa10.58□□□□□ -0.72
TRIO-222ENST00000515144 COL4A2P08572 1712 aa10.58□□□□□ -0.72
TRIO-222ENST00000515144 P0C879 139 aa10.57□□□□□ -0.72
TRIO-222ENST00000515144 Q6ZTC4 211 aa10.57□□□□□ -0.72
TRIO-222ENST00000515144 IGLV1-40P01703 118 aa10.57□□□□□ -0.72
TRIO-222ENST00000515144 TMEM256-PLSCR3K7ERE1 68 aa10.57□□□□□ -0.72
TRIO-222ENST00000515144 IGLV5-52A0A0A0MRZ9 124 aa10.57□□□□□ -0.72
TRIO-222ENST00000515144 SYCNQ0VAF6 134 aa10.57□□□□□ -0.72
TRIO-222ENST00000515144 LINC01545Q5VT33 79 aa10.56□□□□□ -0.72
TRIO-222ENST00000515144 A0A1B0GX51 115 aa10.56□□□□□ -0.72
TRIO-222ENST00000515144 F8P00451 2351 aa10.56□□□□□ -0.72
TRIO-222ENST00000515144 TRBV10-2A0A0K0K1G8 114 aa10.56□□□□□ -0.72
TRIO-222ENST00000515144 M0QY20 66 aa10.56□□□□□ -0.72
TRIO-222ENST00000515144 TRIOO75962 3097 aa10.55□□□□□ -0.72
TRIO-222ENST00000515144 SCXQ7RTU7 201 aa10.55□□□□□ -0.72
TRIO-222ENST00000515144 CEP295Q9C0D2 2601 aa10.55□□□□□ -0.72
TRIO-222ENST00000515144 Q8N6K4 173 aa10.55□□□□□ -0.72
TRIO-222ENST00000515144 RBX1P62877 108 aa10.55□□□□□ -0.72
TRIO-222ENST00000515144 MIAQ16674 131 aa10.55□□□□□ -0.72
TRIO-222ENST00000515144 IGLV4-3A0A075B6K6 122 aa10.54□□□□□ -0.72
TRIO-222ENST00000515144 NDUFA7O95182 113 aa10.54□□□□□ -0.72
TRIO-222ENST00000515144 WFDC10BQ8IUB3 73 aa10.54□□□□□ -0.72
TRIO-222ENST00000515144 KIR2DL5BA0A0G2JN68 375 aa10.54□□□□□ -0.72
TRIO-222ENST00000515144 KIR2DL5BA0A0G2JPC4 375 aa10.54□□□□□ -0.72
TRIO-222ENST00000515144 TRBV6-4A0A1B0GX49 114 aa10.54□□□□□ -0.72
TRIO-222ENST00000515144 KIR2DL5AQ8N109 375 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms