RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 IBA57-AS1B1ANH7 110 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 HSBP1O75506 76 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 PDZD11Q5EBL8 140 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 Q6ZR54 194 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 ERASQ7Z444 233 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 FAM104AQ969W3 186 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 TMEM101Q96IK0 257 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 SACSQ9NZJ4 4579 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 IGLV4-60A0A075B6I1 120 aa8.09□□□□□ -1.11
PDLIM5-220ENST00000514830 Q8N3U1 123 aa8.09□□□□□ -1.11
PDLIM5-220ENST00000514830 Q8N976 141 aa8.09□□□□□ -1.11
PDLIM5-220ENST00000514830 OR5A1Q8NGJ0 315 aa8.09□□□□□ -1.11
PDLIM5-220ENST00000514830 TMEM141Q96I45 108 aa8.09□□□□□ -1.11
PDLIM5-220ENST00000514830 NUPR1O60356 82 aa8.08□□□□□ -1.12
PDLIM5-220ENST00000514830 IGHV3-30P01768 117 aa8.08□□□□□ -1.12
PDLIM5-220ENST00000514830 IGHV3-33P01772 117 aa8.08□□□□□ -1.12
PDLIM5-220ENST00000514830 IGHV3-30-3P0DP02 117 aa8.08□□□□□ -1.12
PDLIM5-220ENST00000514830 IGHV3-30-5P0DP03 117 aa8.08□□□□□ -1.12
PDLIM5-220ENST00000514830 PAPPA-AS1Q5QFB9 102 aa8.08□□□□□ -1.12
PDLIM5-220ENST00000514830 DGAT2L7PQ6IED9 249 aa8.08□□□□□ -1.12
PDLIM5-220ENST00000514830 ZNF664Q8N3J9 261 aa8.08□□□□□ -1.12
PDLIM5-220ENST00000514830 PACRGQ96M98 296 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-220ENST00000514830 IGLV4-3A0A075B6K6 122 aa8.07□□□□□ -1.12
PDLIM5-220ENST00000514830 CCL25O15444 150 aa8.07□□□□□ -1.12
PDLIM5-220ENST00000514830 SCGB3A1Q96QR1 104 aa8.07□□□□□ -1.12
PDLIM5-220ENST00000514830 KRTAP1-5Q9BYS1 174 aa8.07□□□□□ -1.12
PDLIM5-220ENST00000514830 TRAV8-3A0A0A6YYJ7 113 aa8.06□□□□□ -1.12
PDLIM5-220ENST00000514830 ATP5LO75964 103 aa8.06□□□□□ -1.12
PDLIM5-220ENST00000514830 ANGP03950 147 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-220ENST00000514830 NDUFA6P56556 154 aa8.06□□□□□ -1.12
PDLIM5-220ENST00000514830 MIAQ16674 131 aa8.06□□□□□ -1.12
PDLIM5-220ENST00000514830 AMELXQ99217 191 aa8.06□□□□□ -1.12
PDLIM5-220ENST00000514830 KLK12Q9UKR0 248 aa8.06□□□□□ -1.12
PDLIM5-220ENST00000514830 TRAV8-4A0A0B4J246 113 aa8.05□□□□□ -1.12
PDLIM5-220ENST00000514830 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-220ENST00000514830 REG3AQ06141 175 aa8.05□□□□□ -1.12
PDLIM5-220ENST00000514830 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
PDLIM5-220ENST00000514830 ENHOQ6UWT2 76 aa8.05□□□□□ -1.12
PDLIM5-220ENST00000514830 Q6ZUT4 128 aa8.05□□□□□ -1.12
PDLIM5-220ENST00000514830 LINC00269Q8N2A0 174 aa8.05□□□□□ -1.12
PDLIM5-220ENST00000514830 FAM19A2Q8N3H0 131 aa8.05□□□□□ -1.12
PDLIM5-220ENST00000514830 KMT2AQ03164 3969 aa8.04□□□□□ -1.12
PDLIM5-220ENST00000514830 S100A6P06703 90 aa8.04□□□□□ -1.12
PDLIM5-220ENST00000514830 Q6ZN92 141 aa8.04□□□□□ -1.12
PDLIM5-220ENST00000514830 LINC00173Q6ZV60 143 aa8.04□□□□□ -1.12
PDLIM5-220ENST00000514830 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
PDLIM5-220ENST00000514830 NFE4Q86UQ8 179 aa8.04□□□□□ -1.12
PDLIM5-220ENST00000514830 LEPROTL1O95214 131 aa8.03□□□□□ -1.12
PDLIM5-220ENST00000514830 CRPP02741 224 aa8.03□□□□□ -1.12
PDLIM5-220ENST00000514830 TEX43Q6ZNM6 134 aa8.03□□□□□ -1.12
PDLIM5-220ENST00000514830 OPRPNQ99935 248 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-220ENST00000514830 KRTAP17-1Q9BYP8 105 aa8.03□□□□□ -1.12
PDLIM5-220ENST00000514830 VCX2Q9H322 139 aa8.03□□□□□ -1.12
PDLIM5-220ENST00000514830 HSPB8Q9UJY1 196 aa8.03□□□□□ -1.12
PDLIM5-220ENST00000514830 COX11Q9Y6N1 276 aa8.03□□□□□ -1.12
PDLIM5-220ENST00000514830 LINC00959A0A1B0GUT2 108 aa8.02□□□□□ -1.13
PDLIM5-220ENST00000514830 C5orf52A6NGY3 159 aa8.02□□□□□ -1.13
PDLIM5-220ENST00000514830 BAALCQ8WXS3 180 aa8.02□□□□□ -1.13
PDLIM5-220ENST00000514830 UBE2WQ96B02 151 aa8.02□□□□□ -1.13
PDLIM5-220ENST00000514830 IFI27L1Q96BM0 104 aa8.02□□□□□ -1.13
PDLIM5-220ENST00000514830 RMI2Q96E14 147 aa8.02□□□□□ -1.13
PDLIM5-220ENST00000514830 TRAV12-1A0A0B4J245 112 aa8.01□□□□□ -1.13
PDLIM5-220ENST00000514830 PMVKQ15126 192 aa8.01□□□□□ -1.13
PDLIM5-220ENST00000514830 KRTAP26-1Q6PEX3 210 aa8.01□□□□□ -1.13
PDLIM5-220ENST00000514830 Q6ZRN7 208 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-220ENST00000514830 HIST3H2BBQ8N257 126 aa8.01□□□□□ -1.13
PDLIM5-220ENST00000514830 C6orf223Q8N319 242 aa8.01□□□□□ -1.13
PDLIM5-220ENST00000514830 C2orf88Q9BSF0 95 aa8.01□□□□□ -1.13
PDLIM5-220ENST00000514830 IFITM10A6NMD0 228 aa8□□□□□ -1.13
PDLIM5-220ENST00000514830 UBE2D1P51668 147 aa8□□□□□ -1.13
PDLIM5-220ENST00000514830 SS18Q15532 418 aa8□□□□□ -1.13
PDLIM5-220ENST00000514830 C1orf43Q9BWL3 253 aa8□□□□□ -1.13
PDLIM5-220ENST00000514830 TM2D2Q9BX73 214 aa8□□□□□ -1.13
PDLIM5-220ENST00000514830 CST9LQ9H4G1 147 aa8□□□□□ -1.13
PDLIM5-220ENST00000514830 HYDINQ4G0P3 5121 aa7.99□□□□□ -1.13
PDLIM5-220ENST00000514830 M0R2N4 97 aa7.99□□□□□ -1.13
PDLIM5-220ENST00000514830 SNRPEP62304 92 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-220ENST00000514830 SEC11AP67812 179 aa7.99□□□□□ -1.13
PDLIM5-220ENST00000514830 RNASE13Q5GAN3 156 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-220ENST00000514830 C1orf134Q5TEV5 83 aa7.99□□□□□ -1.13
PDLIM5-220ENST00000514830 SPATA12Q7Z6I5 190 aa7.99□□□□□ -1.13
PDLIM5-220ENST00000514830 PRSS29PA6NIE9 313 aa7.98□□□□□ -1.13
PDLIM5-220ENST00000514830 CLPSL2Q6UWE3 100 aa7.98□□□□□ -1.13
PDLIM5-220ENST00000514830 CD164L2Q6UWJ8 174 aa7.98□□□□□ -1.13
PDLIM5-220ENST00000514830 CHCHD10Q8WYQ3 142 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-220ENST00000514830 TRAV13-1A0A0B4J241 112 aa7.97□□□□□ -1.13
PDLIM5-220ENST00000514830 PRSS1P07477 247 aa7.97□□□□□ -1.13
PDLIM5-220ENST00000514830 FABP4P15090 132 aa7.97□□□□□ -1.13
PDLIM5-220ENST00000514830 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
PDLIM5-220ENST00000514830 HIST1H2BLQ99880 126 aa7.97□□□□□ -1.13
PDLIM5-220ENST00000514830 MAP1LC3CQ9BXW4 147 aa7.97□□□□□ -1.13
PDLIM5-220ENST00000514830 Q9HAA7 133 aa7.97□□□□□ -1.13
PDLIM5-220ENST00000514830 IGKV2D-24A0A075B6R9 120 aa7.96□□□□□ -1.14
PDLIM5-220ENST00000514830 IGLV5-45A0A087WSX0 123 aa7.96□□□□□ -1.14
PDLIM5-220ENST00000514830 IGHV3OR16-9A0A0B4J2B5 98 aa7.96□□□□□ -1.14
PDLIM5-220ENST00000514830 TINCRA0A1B0GVN0 87 aa7.96□□□□□ -1.14
PDLIM5-220ENST00000514830 LCE2BO14633 110 aa7.96□□□□□ -1.14
PDLIM5-220ENST00000514830 IGLC3P0DOY3 106 aa7.96□□□□□ -1.14
PDLIM5-220ENST00000514830 S100A2P29034 98 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms