RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 UBE2DNLQ8IWF7 75 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 HIST3H2BBQ8N257 126 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 EXOC3-AS1Q8N2X6 119 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 SMIM20Q8N5G0 67 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 VSTM2AQ8TAG5 236 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 DCANP1Q8TF63 244 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 SH3BGRL3Q9H299 93 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 BANF2Q9H503 90 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 DNAH5Q8TE73 4624 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 HSPG2P98160 4391 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 DEFB131BA0A096LNP1 70 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 TCRBV3S1A0A5B6 114 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 J3QRK9 145 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 PRH1P02810 166 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 METTL15P1P0C7V9 234 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 TRGC1P0CF51 173 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 EIF2B2P49770 351 aaKnown RBP2.18□□□□□ -2.06
RFC1-216ENST00000514572 GNG5P63218 68 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 SLC38A11Q08AI6 406 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 IDO2Q6ZQW0 420 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 OR10J5Q8NHC4 309 aa2.18□□□□□ -2.06
RFC1-216ENST00000514572 RNASE11Q8TAA1 199 aaKnown RBP2.18□□□□□ -2.06
RFC1-216ENST00000514572 NDUFA4O00483 81 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 DEFB4AO15263 64 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 S100A4P26447 101 aaKnown RBP2.17□□□□□ -2.06
RFC1-216ENST00000514572 GTF2A1P52655 376 aaPredicted RBP2.17□□□□□ -2.06
RFC1-216ENST00000514572 YPEL3P61236 119 aaPredicted RBP2.17□□□□□ -2.06
RFC1-216ENST00000514572 ZNF345Q14585 488 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 RRN3P1Q2M238 152 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 KLK9Q2XQG4 91 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 Q6ZQT0 140 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 C6orf201Q7Z4U5 140 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 GINS4Q9BRT9 223 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 IMUPQ9GZP8 106 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 OSTCQ9NRP0 149 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 TMEM14BQ9NUH8 114 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 SS18L2Q9UHA2 77 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 SMPXQ9UHP9 88 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 KLK9Q9UKQ9 250 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 AP4S1Q9Y587 144 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 DYNC1H1Q14204 4646 aaKnown RBP2.17□□□□□ -2.06
RFC1-216ENST00000514572 LRP1BQ9NZR2 4599 aa2.17□□□□□ -2.06
RFC1-216ENST00000514572 TRBV6-7A0A0A0MS04 114 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 TRAV2A0A0B4J234 112 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 A0A0D9SG52 128 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 TMEM189A5PLL7 270 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 OR2T8A6NH00 312 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 TCL1BO95988 128 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 CTSDP07339 412 aaPredicted RBP2.16□□□□□ -2.06
RFC1-216ENST00000514572 SPART-AS1P0CW21 52 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 SAA1P0DJI8 122 aaPredicted RBP2.16□□□□□ -2.06
RFC1-216ENST00000514572 RNASE4P34096 147 aaKnown RBP2.16□□□□□ -2.06
RFC1-216ENST00000514572 NDUFA5Q16718 116 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 Q6ZRN7 208 aaPredicted RBP2.16□□□□□ -2.06
RFC1-216ENST00000514572 OR13C6PQ8NH95 151 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 TMEM167AQ8TBQ9 72 aa2.16□□□□□ -2.06
RFC1-216ENST00000514572 LYRM2Q9NU23 88 aaPredicted RBP2.16□□□□□ -2.06
RFC1-216ENST00000514572 UBR4Q5T4S7 5183 aa2.15□□□□□ -2.06
RFC1-216ENST00000514572 IGKV3-7A0A075B6H7 116 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 TRAV14DV4A0A0A6YYC5 116 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 A0A1B0GW64 132 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 IFNA7P01567 189 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 ARPC4P59998 168 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 RHOBP62745 196 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 C10orf55Q5SWW7 151 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 AKR1C8PQ5T2L2 129 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 LYRM7Q5U5X0 104 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 XAF1Q6GPH4 301 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 C15orf53Q8NAA6 179 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 OR5A1Q8NGJ0 315 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 ARHGAP5-AS1Q96IT6 56 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 RHPN1-AS1Q9BWJ2 59 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 MIXL1Q9H2W2 232 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 C8orf4Q9NR00 106 aa2.15□□□□□ -2.07
RFC1-216ENST00000514572 NBDYA0A0U1RRE5 68 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 IGLC7A0M8Q6 106 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 TMEM14DPA8MWL7 114 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 NDUFC2O95298 119 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 TRAPPC2P0DI81 140 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 TRAPPC2BP0DI82 140 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 CRYGAP11844 174 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 CCL18P55774 89 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 DEFB131AP59861 70 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 SNRPD3P62318 126 aaKnown RBP2.14□□□□□ -2.07
RFC1-216ENST00000514572 Q56UQ5 140 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 TRIQKQ629K1 86 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 BORCS5Q969J3 196 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 LPAR5Q9H1C0 372 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 BET1LQ9NYM9 111 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 RABAC1Q9UI14 185 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 EPDR1Q9UM22 224 aa2.14□□□□□ -2.07
RFC1-216ENST00000514572 PNMA8CA0A1B0GUJ8 204 aa2.13□□□□□ -2.07
RFC1-216ENST00000514572 LOC100130705A0A1B0GUX0 176 aa2.13□□□□□ -2.07
RFC1-216ENST00000514572 EFCAB10A6NFE3 127 aa2.13□□□□□ -2.07
RFC1-216ENST00000514572 E7EUB6 86 aa2.13□□□□□ -2.07
RFC1-216ENST00000514572 GNG7O60262 68 aa2.13□□□□□ -2.07
RFC1-216ENST00000514572 SNAPC5O75971 98 aa2.13□□□□□ -2.07
RFC1-216ENST00000514572 PMP2P02689 132 aa2.13□□□□□ -2.07
RFC1-216ENST00000514572 HTN3P15516 51 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms