RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 A0A0A0MQY5 61 aa5.4□□□□□ -1.55
CLIP1-205ENST00000514271 C9JAW5 83 aa5.4□□□□□ -1.55
CLIP1-205ENST00000514271 GHRHP01286 108 aa5.4□□□□□ -1.55
CLIP1-205ENST00000514271 SUMO2P61956 95 aaKnown RBP5.4□□□□□ -1.55
CLIP1-205ENST00000514271 Q9UF83 564 aa5.4□□□□□ -1.55
CLIP1-205ENST00000514271 X6R8D5 127 aa5.4□□□□□ -1.55
CLIP1-205ENST00000514271 ANK2Q01484 3957 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 CSPG4Q6UVK1 2322 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 IGHV3-21A0A0B4J1V1 117 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 G3V318 75 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 NDUFA4O00483 81 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 LINC00482Q8N8I6 264 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 C21orf62Q9NYP8 219 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 TRAV2A0A0B4J234 112 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 TRAV4A0A0B4J268 109 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 TMEM262E9PQX1 116 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 LINC00694P0DN24 101 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 KRTAP10-3P60369 221 aa5.39□□□□□ -1.55
CLIP1-205ENST00000514271 KPRPQ5T749 579 aaPredicted RBP5.39□□□□□ -1.55
CLIP1-205ENST00000514271 IFITM1P13164 125 aa5.38□□□□□ -1.55
CLIP1-205ENST00000514271 C5orf38Q86SI9 138 aa5.38□□□□□ -1.55
CLIP1-205ENST00000514271 TMEM141Q96I45 108 aa5.38□□□□□ -1.55
CLIP1-205ENST00000514271 RPL39LQ96EH5 51 aaKnown RBP5.38□□□□□ -1.55
CLIP1-205ENST00000514271 ZNF469Q96JG9 3925 aaPredicted RBP5.38□□□□□ -1.55
CLIP1-205ENST00000514271 OVOL1O14753 267 aa5.38□□□□□ -1.55
CLIP1-205ENST00000514271 C15orf32Q32M92 178 aa5.38□□□□□ -1.55
CLIP1-205ENST00000514271 HRCT1Q6UXD1 115 aa5.38□□□□□ -1.55
CLIP1-205ENST00000514271 MRPS36P82909 103 aaKnown RBP5.37□□□□□ -1.55
CLIP1-205ENST00000514271 PYGO1Q9Y3Y4 419 aa5.37□□□□□ -1.55
CLIP1-205ENST00000514271 LEPROTO15243 131 aa5.37□□□□□ -1.55
CLIP1-205ENST00000514271 MEIG1Q5JSS6 88 aa5.37□□□□□ -1.55
CLIP1-205ENST00000514271 RNF182Q8N6D2 247 aa5.37□□□□□ -1.55
CLIP1-205ENST00000514271 AAMDCQ9H7C9 122 aa5.37□□□□□ -1.55
CLIP1-205ENST00000514271 H7C423 109 aa5.36□□□□□ -1.55
CLIP1-205ENST00000514271 DUSP14O95147 198 aaKnown RBP5.36□□□□□ -1.55
CLIP1-205ENST00000514271 C2orf66Q6UXQ4 117 aa5.36□□□□□ -1.55
CLIP1-205ENST00000514271 SMCR5Q8TEV8 140 aa5.36□□□□□ -1.55
CLIP1-205ENST00000514271 TIMM17BO60830 172 aa5.36□□□□□ -1.55
CLIP1-205ENST00000514271 HOXD3P31249 432 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-205ENST00000514271 IGFL4Q6B9Z1 124 aa5.36□□□□□ -1.55
CLIP1-205ENST00000514271 CSMD2Q7Z408 3487 aa5.36□□□□□ -1.55
CLIP1-205ENST00000514271 TRBV10-2A0A0K0K1G8 114 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 EGFEM1PQ0D2K5 195 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 DPH3P1Q9H4G8 78 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 UPK3BQ9BT76 320 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 KLK15Q9H2R5 256 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 Q9H8V8 135 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 PRO1854Q9UHT4 67 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 M0QY20 66 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 HIST1H4GQ99525 98 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 IMUPQ9GZP8 106 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 LINC00527Q9UJ94 153 aa5.35□□□□□ -1.55
CLIP1-205ENST00000514271 PMVKQ15126 192 aa5.34□□□□□ -1.55
CLIP1-205ENST00000514271 LST1O00453 97 aa5.34□□□□□ -1.55
CLIP1-205ENST00000514271 PRB4P10163 310 aaPredicted RBP5.34□□□□□ -1.55
CLIP1-205ENST00000514271 PAPPA-AS1Q5QFB9 102 aa5.34□□□□□ -1.55
CLIP1-205ENST00000514271 DAZ1Q9NQZ3 744 aaKnown RBP5.34□□□□□ -1.55
CLIP1-205ENST00000514271 C2CD3Q4AC94 2353 aa5.34□□□□□ -1.56
CLIP1-205ENST00000514271 TMSB15BA0A087X1C1 80 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 TRIAP1O43715 76 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 APELAP0DMC3 54 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 ADAMTSL4-AS1Q5T5F5 129 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 Q5XG85 94 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 C2orf82Q6UX34 121 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 SONP18583 2426 aaKnown RBP5.33□□□□□ -1.56
CLIP1-205ENST00000514271 PIK3CD-AS1Q5SR53 167 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 METTL26Q96S19 204 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 LINC00467Q9BRT7 94 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 H3BT86 120 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 SLC25A20O43772 301 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 RHOHQ15669 191 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 CLEC19AQ6UXS0 136 aa5.33□□□□□ -1.56
CLIP1-205ENST00000514271 IGLV5-39A0A0G2JS06 123 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 A0A0J9YXY3 114 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 IGLV1-51P01701 117 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 SUMO4Q6EEV6 95 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 TRPT1Q86TN4 253 aaKnown RBP5.32□□□□□ -1.56
CLIP1-205ENST00000514271 TLN2Q9Y4G6 2542 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 ZNF815PA8K554 130 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 PRSS1P07477 247 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 C10orf99Q6UWK7 81 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 DYNLRB2Q8TF09 96 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 ZANQ9Y493 2812 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 DNAH3Q8TD57 4116 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 IGLV4-3A0A075B6K6 122 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 PPP1R17O96001 155 aa5.32□□□□□ -1.56
CLIP1-205ENST00000514271 IGHV3-16A0A0C4DH30 117 aa5.31□□□□□ -1.56
CLIP1-205ENST00000514271 CMYA5Q8N3K9 4069 aa5.31□□□□□ -1.56
CLIP1-205ENST00000514271 A8MWV9 139 aa5.31□□□□□ -1.56
CLIP1-205ENST00000514271 IGHV3-11P01762 117 aa5.31□□□□□ -1.56
CLIP1-205ENST00000514271 SCGB3A1Q96QR1 104 aa5.31□□□□□ -1.56
CLIP1-205ENST00000514271 J3QQQ9 107 aa5.31□□□□□ -1.56
CLIP1-205ENST00000514271 TEX49A0A1B0GTD5 131 aa5.3□□□□□ -1.56
CLIP1-205ENST00000514271 J3QL48 77 aa5.3□□□□□ -1.56
CLIP1-205ENST00000514271 SLURP1P55000 103 aa5.3□□□□□ -1.56
CLIP1-205ENST00000514271 ANXA2RQ3ZCQ2 193 aa5.3□□□□□ -1.56
CLIP1-205ENST00000514271 LYPD5Q6UWN5 251 aa5.3□□□□□ -1.56
CLIP1-205ENST00000514271 TMEM61Q8N0U2 210 aa5.3□□□□□ -1.56
CLIP1-205ENST00000514271 CHCHD7Q9BUK0 85 aa5.3□□□□□ -1.56
CLIP1-205ENST00000514271 RPL39P62891 51 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms