RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 MT-ND6P03923 174 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 ESDP10768 282 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 GCSHP23434 173 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 RNASEKQ6P5S7 137 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 C10orf126Q8N4M7 172 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 C20orf203Q8NBC4 194 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 UBE2WQ96B02 151 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 KIR2DL4Q99706 377 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 PLA2G2DQ9UNK4 145 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 TRAPPC1Q9Y5R8 145 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 FGF6P10767 208 aa6.57□□□□□ -1.36
TOPBP1-209ENST00000513818 RPL39P62891 51 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-209ENST00000513818 COX19Q49B96 90 aa6.57□□□□□ -1.36
TOPBP1-209ENST00000513818 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-209ENST00000513818 ALKBH7Q9BT30 221 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-209ENST00000513818 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 IGKV3OR2-268A0A0C4DH90 116 aa6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 C5orf52A6NGY3 159 aa6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 CRPP02741 224 aa6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 IFI27P40305 119 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 RPL32P62910 135 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 RNASE13Q5GAN3 156 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 AMMECR1LQ6DCA0 310 aa6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 ENHOQ6UWT2 76 aa6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 LINC00269Q8N2A0 174 aa6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 LAMTOR2Q9Y2Q5 125 aa6.56□□□□□ -1.36
TOPBP1-209ENST00000513818 IGLV10-54A0A075B6I4 117 aa6.55□□□□□ -1.36
TOPBP1-209ENST00000513818 F8WDY8 70 aa6.55□□□□□ -1.36
TOPBP1-209ENST00000513818 PKIAP61925 76 aa6.55□□□□□ -1.36
TOPBP1-209ENST00000513818 LAGE3Q14657 143 aa6.55□□□□□ -1.36
TOPBP1-209ENST00000513818 Q8N8P6 123 aa6.55□□□□□ -1.36
TOPBP1-209ENST00000513818 IGKV2D-24A0A075B6R9 120 aa6.54□□□□□ -1.36
TOPBP1-209ENST00000513818 COLCA2A8K830 154 aa6.54□□□□□ -1.36
TOPBP1-209ENST00000513818 TRIAP1O43715 76 aa6.54□□□□□ -1.36
TOPBP1-209ENST00000513818 VPREB1P12018 145 aa6.54□□□□□ -1.36
TOPBP1-209ENST00000513818 RAB5AP20339 215 aa6.54□□□□□ -1.36
TOPBP1-209ENST00000513818 FUSP35637 526 aaKnown RBP eCLIP6.54□□□□□ -1.36
TOPBP1-209ENST00000513818 Q6ZUT4 128 aa6.54□□□□□ -1.36
TOPBP1-209ENST00000513818 UBE2D4Q9Y2X8 147 aa6.54□□□□□ -1.36
TOPBP1-209ENST00000513818 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 K7EP13 123 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 LECT2O14960 151 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 PSCAO43653 123 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 TRGC2P03986 189 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 REG3AQ06141 175 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 WFDC2Q14508 124 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 OR5A1Q8NGJ0 315 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 PRSS3P2Q8NHM4 247 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 C18orf32Q8TCD1 76 aa6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 OPRPNQ99935 248 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 NXT2Q9NPJ8 142 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 APOBP04114 4563 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-209ENST00000513818 DNAH8Q96JB1 4490 aa6.52□□□□□ -1.36
TOPBP1-209ENST00000513818 TRAV8-3A0A0A6YYJ7 113 aa6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 A0A1B0GUV1 79 aa6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 H7C423 109 aa6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 NFE4Q86UQ8 179 aa6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 MAPKAPK5-AS1Q8N8E1 139 aa6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 URB1-AS1Q96HZ7 61 aa6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 TMEM101Q96IK0 257 aa6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 PRR34Q9NV39 138 aa6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 CHTOPQ9Y3Y2 248 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-209ENST00000513818 A0A1B0GVY2 172 aa6.51□□□□□ -1.37
TOPBP1-209ENST00000513818 ZNF25P17030 456 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-209ENST00000513818 ZC2HC1BQ5TFG8 222 aa6.51□□□□□ -1.37
TOPBP1-209ENST00000513818 C2orf66Q6UXQ4 117 aa6.51□□□□□ -1.37
TOPBP1-209ENST00000513818 LINC00336Q6ZUF6 198 aa6.51□□□□□ -1.37
TOPBP1-209ENST00000513818 FA2HQ7L5A8 372 aa6.51□□□□□ -1.37
TOPBP1-209ENST00000513818 CDC42SE2Q9NRR3 84 aa6.51□□□□□ -1.37
TOPBP1-209ENST00000513818 S100A1P23297 94 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 Q0VG73 95 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 PMCHL1Q16048 86 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 MIAQ16674 131 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 ORMDL2Q53FV1 153 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 KRTAP26-1Q6PEX3 210 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 ZNF664Q8N3J9 261 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 BAALCQ8WXS3 180 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 FAM104AQ969W3 186 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 TMEM18Q96B42 140 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 RMI2Q96E14 147 aa6.5□□□□□ -1.37
TOPBP1-209ENST00000513818 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
TOPBP1-209ENST00000513818 A0A087WTM6 91 aa6.49□□□□□ -1.37
TOPBP1-209ENST00000513818 TM2D2Q9BX73 214 aa6.49□□□□□ -1.37
TOPBP1-209ENST00000513818 SPANXA1Q9NS26 97 aa6.49□□□□□ -1.37
TOPBP1-209ENST00000513818 CYSLTR1Q9Y271 337 aa6.49□□□□□ -1.37
TOPBP1-209ENST00000513818 TRAV13-1A0A0B4J241 112 aa6.48□□□□□ -1.37
TOPBP1-209ENST00000513818 LINC00959A0A1B0GUT2 108 aa6.48□□□□□ -1.37
TOPBP1-209ENST00000513818 LRCOL1A6NCL2 159 aa6.48□□□□□ -1.37
TOPBP1-209ENST00000513818 GAGE12HA6NDE8 117 aa6.48□□□□□ -1.37
TOPBP1-209ENST00000513818 XCL1P47992 114 aa6.48□□□□□ -1.37
TOPBP1-209ENST00000513818 KRTAP10-2P60368 255 aa6.48□□□□□ -1.37
TOPBP1-209ENST00000513818 CHCHD10Q8WYQ3 142 aaPredicted RBP6.48□□□□□ -1.37
TOPBP1-209ENST00000513818 TIMM21Q9BVV7 248 aa6.48□□□□□ -1.37
TOPBP1-209ENST00000513818 A0A096LNJ9 63 aa6.47□□□□□ -1.37
TOPBP1-209ENST00000513818 LINC01546A6NGU7 62 aa6.47□□□□□ -1.37
TOPBP1-209ENST00000513818 IFITM10A6NMD0 228 aa6.47□□□□□ -1.37
TOPBP1-209ENST00000513818 H0Y8G0 127 aa6.47□□□□□ -1.37
TOPBP1-209ENST00000513818 CCL25O15444 150 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 584.4 ms