RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TRBV25-1A0A075B6N4 114 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.88□□□□□ -1.47
RNF4-220ENST00000513578 TINCRA0A1B0GVN0 87 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 TMEM223A0PJW6 202 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 IGKV2-29A2NJV5 120 aaPredicted RBP5.88□□□□□ -1.47
RNF4-220ENST00000513578 SPART-AS1P0CW21 52 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 DEFB130BP0DP73 79 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 DEFB130AP0DP74 79 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 ZNF25P17030 456 aaPredicted RBP5.88□□□□□ -1.47
RNF4-220ENST00000513578 TIRAPP58753 221 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 HSD52Q0P140 79 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 TAL2Q16559 108 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 COL5A1-AS1Q5SY13 56 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 TMEM243Q9BU79 118 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 CHAC1Q9BUX1 264 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 CMYA5Q8N3K9 4069 aa5.88□□□□□ -1.47
RNF4-220ENST00000513578 IGLV5-45A0A087WSX0 123 aa5.87□□□□□ -1.47
RNF4-220ENST00000513578 TRAV26-1A0A087WT03 109 aa5.87□□□□□ -1.47
RNF4-220ENST00000513578 TRBV6-8A0A0A6YYG3 113 aa5.87□□□□□ -1.47
RNF4-220ENST00000513578 ATP5G1P05496 136 aa5.87□□□□□ -1.47
RNF4-220ENST00000513578 ZNF22P17026 224 aaPredicted RBP5.87□□□□□ -1.47
RNF4-220ENST00000513578 UBE2D1P51668 147 aa5.87□□□□□ -1.47
RNF4-220ENST00000513578 MPV17L2Q567V2 206 aa5.87□□□□□ -1.47
RNF4-220ENST00000513578 BVES-AS1Q5T3Y7 98 aa5.87□□□□□ -1.47
RNF4-220ENST00000513578 DGAT2L7PQ6IED9 249 aa5.87□□□□□ -1.47
RNF4-220ENST00000513578 A0A0J9YXV3 536 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 LOC100131303A0A0U1RQF7 123 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 MYMXA0A1B0GTQ4 84 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 A6NJY4 79 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 LEPROTO15243 131 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 HINT1P49773 126 aaPredicted RBP5.86□□□□□ -1.47
RNF4-220ENST00000513578 DAD1P61803 113 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 SEC11AP67812 179 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 CEMP1Q6PRD7 247 aaPredicted RBP5.86□□□□□ -1.47
RNF4-220ENST00000513578 Q6ZUT4 128 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 MAPKAPK5-AS1Q8N8E1 139 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 ATP6V0E2Q8NHE4 81 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 C11orf68Q9H3H3 251 aaKnown RBP5.86□□□□□ -1.47
RNF4-220ENST00000513578 CDC42SE2Q9NRR3 84 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 TP73-AS1Q9UF72 201 aa5.86□□□□□ -1.47
RNF4-220ENST00000513578 DNAH3Q8TD57 4116 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 UBE2L6O14933 153 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 PAX4O43316 350 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 GYPEP15421 78 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 TMEM170BQ5T4T1 132 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 KPRPQ5T749 579 aaPredicted RBP5.85□□□□□ -1.47
RNF4-220ENST00000513578 SH2D6Q7Z4S9 175 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 OR5A1Q8NGJ0 315 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 PLEKHB2Q96CS7 222 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 TMEM101Q96IK0 257 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 VSIG2Q96IQ7 327 aa5.85□□□□□ -1.47
RNF4-220ENST00000513578 TRAV8-6A0A0B4J262 113 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 A0A1B0GUV1 79 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 G3V4G9 280 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 H3BNG1 76 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 TCTAP57738 103 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 HERVK_113P63121 156 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 AMMECR1LQ6DCA0 310 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 ORAOV1Q8WV07 137 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 TM2D2Q9BX73 214 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 TTTY13Q9BZ97 58 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 CELA1Q9UNI1 258 aa5.84□□□□□ -1.47
RNF4-220ENST00000513578 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
RNF4-220ENST00000513578 A0A1B0GV90 55 aa5.83□□□□□ -1.48
RNF4-220ENST00000513578 H3BRM9 83 aa5.83□□□□□ -1.48
RNF4-220ENST00000513578 J3QQQ9 107 aa5.83□□□□□ -1.48
RNF4-220ENST00000513578 BATFQ16520 125 aa5.83□□□□□ -1.48
RNF4-220ENST00000513578 SPANXB1Q9NS25 103 aaPredicted RBP5.83□□□□□ -1.48
RNF4-220ENST00000513578 RYR3Q15413 4870 aa5.83□□□□□ -1.48
RNF4-220ENST00000513578 ANK2Q01484 3957 aa5.82□□□□□ -1.48
RNF4-220ENST00000513578 TRRAPQ9Y4A5 3859 aa5.82□□□□□ -1.48
RNF4-220ENST00000513578 A6NDN8 102 aa5.82□□□□□ -1.48
RNF4-220ENST00000513578 ZNF815PA8K554 130 aa5.82□□□□□ -1.48
RNF4-220ENST00000513578 DEFB4AO15263 64 aa5.82□□□□□ -1.48
RNF4-220ENST00000513578 CCL25O15444 150 aa5.82□□□□□ -1.48
RNF4-220ENST00000513578 LGALS3P17931 250 aaKnown RBP5.82□□□□□ -1.48
RNF4-220ENST00000513578 MRPL23Q16540 153 aaKnown RBP5.82□□□□□ -1.48
RNF4-220ENST00000513578 LINC00242Q5T6M2 205 aa5.82□□□□□ -1.48
RNF4-220ENST00000513578 GEMIN7Q9H840 131 aaKnown RBP5.82□□□□□ -1.48
RNF4-220ENST00000513578 IGLV5-39A0A0G2JS06 123 aa5.81□□□□□ -1.48
RNF4-220ENST00000513578 A0A0J9YY99 117 aa5.81□□□□□ -1.48
RNF4-220ENST00000513578 IGHV3-30-3P0DP02 117 aa5.81□□□□□ -1.48
RNF4-220ENST00000513578 TSPEAR-AS2P59090 65 aa5.81□□□□□ -1.48
RNF4-220ENST00000513578 C12orf74Q32Q52 190 aa5.81□□□□□ -1.48
RNF4-220ENST00000513578 RNASE13Q5GAN3 156 aaKnown RBP5.81□□□□□ -1.48
RNF4-220ENST00000513578 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
RNF4-220ENST00000513578 CEND1Q8N111 149 aa5.81□□□□□ -1.48
RNF4-220ENST00000513578 F5H768 121 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 J3QL48 77 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 TAX1BP3O14907 124 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 GAGE6Q13070 117 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 LINC00469Q8N7U9 141 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 SPATA25Q9BR10 227 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 TM2D3Q9BRN9 247 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 CHCHD5Q9BSY4 110 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 CDKN2A-AS1Q9UH64 79 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 ICOSQ9Y6W8 199 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 KMT2CQ8NEZ4 4911 aaKnown RBP5.8□□□□□ -1.48
RNF4-220ENST00000513578 BIRC6Q9NR09 4857 aa5.8□□□□□ -1.48
RNF4-220ENST00000513578 SMCPP49901 116 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms