RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 LYZL1Q6UWQ5 148 aa6.51□□□□□ -1.37
DDX41-216ENST00000513562 TMEM101Q96IK0 257 aa6.51□□□□□ -1.37
DDX41-216ENST00000513562 C19orf71A6NCJ1 209 aa6.5□□□□□ -1.37
DDX41-216ENST00000513562 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
DDX41-216ENST00000513562 RPL39LQ96EH5 51 aaKnown RBP6.5□□□□□ -1.37
DDX41-216ENST00000513562 C2orf48Q96LS8 159 aa6.5□□□□□ -1.37
DDX41-216ENST00000513562 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
DDX41-216ENST00000513562 CARHSP1Q9Y2V2 147 aaKnown RBP6.5□□□□□ -1.37
DDX41-216ENST00000513562 XKRY2A2RUG3 117 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 SDHAF1A6NFY7 115 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 COX7A2LO14548 114 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 BCL2L11O43521 198 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 ESDP10768 282 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 MALP21145 153 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 CTRLP40313 264 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 KCNRGQ8N5I3 272 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 OPRPNQ99935 248 aaPredicted RBP6.49□□□□□ -1.37
DDX41-216ENST00000513562 CNFNQ9BYD5 112 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 CDC42SE2Q9NRR3 84 aa6.49□□□□□ -1.37
DDX41-216ENST00000513562 FAM168BA1KXE4 195 aa6.48□□□□□ -1.37
DDX41-216ENST00000513562 TSPAN13O95857 204 aa6.48□□□□□ -1.37
DDX41-216ENST00000513562 RNF151Q2KHN1 245 aa6.48□□□□□ -1.37
DDX41-216ENST00000513562 CENPWQ5EE01 88 aa6.48□□□□□ -1.37
DDX41-216ENST00000513562 MRPL52Q86TS9 123 aaKnown RBP6.48□□□□□ -1.37
DDX41-216ENST00000513562 C9orf62Q8N4C0 152 aa6.48□□□□□ -1.37
DDX41-216ENST00000513562 CYTL1Q9NRR1 136 aa6.48□□□□□ -1.37
DDX41-216ENST00000513562 I3L3M4 83 aa6.47□□□□□ -1.37
DDX41-216ENST00000513562 IFNA1P01562 189 aa6.47□□□□□ -1.37
DDX41-216ENST00000513562 TWIST1Q15672 202 aa6.47□□□□□ -1.37
DDX41-216ENST00000513562 SFT2D1Q8WV19 159 aa6.47□□□□□ -1.37
DDX41-216ENST00000513562 MBD3L1Q8WWY6 194 aa6.47□□□□□ -1.37
DDX41-216ENST00000513562 C11orf52Q96A22 123 aa6.47□□□□□ -1.37
DDX41-216ENST00000513562 A0A1B0GV50 99 aa6.46□□□□□ -1.38
DDX41-216ENST00000513562 C1orf196B1AJZ1 125 aa6.46□□□□□ -1.38
DDX41-216ENST00000513562 TSHBP01222 138 aa6.46□□□□□ -1.38
DDX41-216ENST00000513562 SMIM12Q96EX1 92 aa6.46□□□□□ -1.38
DDX41-216ENST00000513562 MRAP2Q96G30 205 aa6.46□□□□□ -1.38
DDX41-216ENST00000513562 RPP21Q9H633 154 aaKnown RBP6.46□□□□□ -1.38
DDX41-216ENST00000513562 TRBV6-5A0A0K0K1A5 114 aa6.45□□□□□ -1.38
DDX41-216ENST00000513562 PMCHP20382 165 aa6.45□□□□□ -1.38
DDX41-216ENST00000513562 SPAG11BQ08648 103 aa6.45□□□□□ -1.38
DDX41-216ENST00000513562 TEX261Q6UWH6 196 aa6.45□□□□□ -1.38
DDX41-216ENST00000513562 FAM19A5Q7Z5A7 132 aaPredicted RBP6.45□□□□□ -1.38
DDX41-216ENST00000513562 SLC51BQ86UW2 128 aa6.45□□□□□ -1.38
DDX41-216ENST00000513562 KRTAP7-1Q8IUC3 87 aa6.45□□□□□ -1.38
DDX41-216ENST00000513562 FAM213BQ8TBF2 198 aa6.45□□□□□ -1.38
DDX41-216ENST00000513562 FAM210AQ96ND0 272 aa6.45□□□□□ -1.38
DDX41-216ENST00000513562 MRPL35Q9NZE8 188 aaKnown RBP6.45□□□□□ -1.38
DDX41-216ENST00000513562 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
DDX41-216ENST00000513562 IMMP2LQ96T52 175 aa6.44□□□□□ -1.38
DDX41-216ENST00000513562 TMEM242Q9NWH2 141 aa6.44□□□□□ -1.38
DDX41-216ENST00000513562 C7orf77A4D0Y5 90 aa6.43□□□□□ -1.38
DDX41-216ENST00000513562 M0QXV9 152 aa6.43□□□□□ -1.38
DDX41-216ENST00000513562 GNG4P50150 75 aa6.43□□□□□ -1.38
DDX41-216ENST00000513562 FOXA3P55318 350 aaPredicted RBP6.43□□□□□ -1.38
DDX41-216ENST00000513562 UBE2BP63146 152 aa6.43□□□□□ -1.38
DDX41-216ENST00000513562 CCL20P78556 96 aa6.43□□□□□ -1.38
DDX41-216ENST00000513562 C5orf38Q86SI9 138 aa6.43□□□□□ -1.38
DDX41-216ENST00000513562 OR10D4PQ8NGN7 298 aa6.43□□□□□ -1.38
DDX41-216ENST00000513562 RAB19A4D1S5 217 aa6.42□□□□□ -1.38
DDX41-216ENST00000513562 UMAD1C9J7I0 102 aa6.42□□□□□ -1.38
DDX41-216ENST00000513562 F8WDY8 70 aa6.42□□□□□ -1.38
DDX41-216ENST00000513562 ZNF861PO60384 105 aa6.42□□□□□ -1.38
DDX41-216ENST00000513562 TPRXLQ17RH7 258 aa6.42□□□□□ -1.38
DDX41-216ENST00000513562 SMIM15Q7Z3B0 74 aa6.42□□□□□ -1.38
DDX41-216ENST00000513562 RNASE7Q9H1E1 156 aaKnown RBP6.42□□□□□ -1.38
DDX41-216ENST00000513562 CDIP1Q9H305 208 aa6.42□□□□□ -1.38
DDX41-216ENST00000513562 TRBV20OR9-2A0A075B6H5 130 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 A0A087X002 238 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 TRAV13-1A0A0B4J241 112 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 NUDT10Q8NFP7 164 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 NUDT11Q96G61 164 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 SMDT1Q9H4I9 107 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 ST20Q9HBF5 79 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 MANBALQ9NQG1 85 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 BIN3Q9NQY0 253 aa6.41□□□□□ -1.38
DDX41-216ENST00000513562 CSDC2Q9Y534 153 aaKnown RBP6.41□□□□□ -1.38
DDX41-216ENST00000513562 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.38
DDX41-216ENST00000513562 NDUFA1O15239 70 aa6.4□□□□□ -1.38
DDX41-216ENST00000513562 H2AFB1P0C5Y9 115 aa6.4□□□□□ -1.38
DDX41-216ENST00000513562 RNASE13Q5GAN3 156 aaKnown RBP6.4□□□□□ -1.38
DDX41-216ENST00000513562 UBE2D4Q9Y2X8 147 aa6.4□□□□□ -1.38
DDX41-216ENST00000513562 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
DDX41-216ENST00000513562 TMEM241Q24JQ0 296 aa6.39□□□□□ -1.39
DDX41-216ENST00000513562 GAGE2EQ4V326 116 aa6.39□□□□□ -1.39
DDX41-216ENST00000513562 TYMSOSQ8TAI1 123 aa6.39□□□□□ -1.39
DDX41-216ENST00000513562 ORAOV1Q8WV07 137 aa6.39□□□□□ -1.39
DDX41-216ENST00000513562 RETNLBQ9BQ08 111 aa6.39□□□□□ -1.39
DDX41-216ENST00000513562 GNG13Q9P2W3 67 aa6.39□□□□□ -1.39
DDX41-216ENST00000513562 C6orf48Q9UBA6 75 aa6.39□□□□□ -1.39
DDX41-216ENST00000513562 GAGE2DQ9UEU5 116 aa6.39□□□□□ -1.39
DDX41-216ENST00000513562 ALKAL2Q6UX46 152 aa6.38□□□□□ -1.39
DDX41-216ENST00000513562 UNQ6190/PRO20217Q6UXQ8 127 aa6.38□□□□□ -1.39
DDX41-216ENST00000513562 Q6ZUT4 128 aa6.38□□□□□ -1.39
DDX41-216ENST00000513562 TEX46H3BTG2 121 aa6.37□□□□□ -1.39
DDX41-216ENST00000513562 CRYGAP11844 174 aa6.37□□□□□ -1.39
DDX41-216ENST00000513562 SMAGPQ0VAQ4 97 aa6.37□□□□□ -1.39
DDX41-216ENST00000513562 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
DDX41-216ENST00000513562 PDE6DO43924 150 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms