RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 MRPL52Q86TS9 123 aaKnown RBP11.54□□□□□ -0.56
DDR1-270ENST00000513043 Q8N8P6 123 aa11.54□□□□□ -0.56
DDR1-270ENST00000513043 YPEL4Q96NS1 127 aa11.54□□□□□ -0.56
DDR1-270ENST00000513043 SMCO4Q9NRQ5 59 aa11.54□□□□□ -0.56
DDR1-270ENST00000513043 TRAPPC1Q9Y5R8 145 aa11.54□□□□□ -0.56
DDR1-270ENST00000513043 IFI27P40305 119 aaPredicted RBP11.53□□□□□ -0.56
DDR1-270ENST00000513043 TMEM18Q96B42 140 aa11.53□□□□□ -0.56
DDR1-270ENST00000513043 ALKBH7Q9BT30 221 aaPredicted RBP11.53□□□□□ -0.56
DDR1-270ENST00000513043 UBE2D4Q9Y2X8 147 aa11.53□□□□□ -0.56
DDR1-270ENST00000513043 PKD1P98161 4303 aa11.52□□□□□ -0.56
DDR1-270ENST00000513043 HERC2O95714 4834 aa11.52□□□□□ -0.57
DDR1-270ENST00000513043 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.57
DDR1-270ENST00000513043 ZNF664Q8N3J9 261 aa11.51□□□□□ -0.57
DDR1-270ENST00000513043 NXT2Q9NPJ8 142 aaKnown RBP11.51□□□□□ -0.57
DDR1-270ENST00000513043 CDC42SE2Q9NRR3 84 aa11.51□□□□□ -0.57
DDR1-270ENST00000513043 PKHD1P08F94 4074 aa11.5□□□□□ -0.57
DDR1-270ENST00000513043 TRAV8-4A0A0B4J246 113 aa11.5□□□□□ -0.57
DDR1-270ENST00000513043 C16orf90A8MZG2 172 aa11.5□□□□□ -0.57
DDR1-270ENST00000513043 SMAGPQ0VAQ4 97 aa11.5□□□□□ -0.57
DDR1-270ENST00000513043 KRTAP26-1Q6PEX3 210 aa11.5□□□□□ -0.57
DDR1-270ENST00000513043 Q6ZUT4 128 aa11.5□□□□□ -0.57
DDR1-270ENST00000513043 Q8N814 137 aa11.49□□□□□ -0.57
DDR1-270ENST00000513043 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
DDR1-270ENST00000513043 OPRPNQ99935 248 aaPredicted RBP11.49□□□□□ -0.57
DDR1-270ENST00000513043 DNAH11Q96DT5 4516 aa11.48□□□□□ -0.57
DDR1-270ENST00000513043 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
DDR1-270ENST00000513043 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.47□□□□□ -0.57
DDR1-270ENST00000513043 GAGE12HA6NDE8 117 aa11.47□□□□□ -0.57
DDR1-270ENST00000513043 ORMDL2Q53FV1 153 aa11.47□□□□□ -0.57
DDR1-270ENST00000513043 CHCHD10Q8WYQ3 142 aaPredicted RBP11.47□□□□□ -0.57
DDR1-270ENST00000513043 SPANXA1Q9NS26 97 aa11.47□□□□□ -0.57
DDR1-270ENST00000513043 CSDC2Q9Y534 153 aaKnown RBP11.47□□□□□ -0.57
DDR1-270ENST00000513043 LINC00959A0A1B0GUT2 108 aa11.46□□□□□ -0.57
DDR1-270ENST00000513043 USP17L23D6RBM5 183 aa11.46□□□□□ -0.57
DDR1-270ENST00000513043 C2orf66Q6UXQ4 117 aa11.46□□□□□ -0.57
DDR1-270ENST00000513043 KIAA1109Q2LD37 5005 aa11.45□□□□□ -0.58
DDR1-270ENST00000513043 SCO1O75880 301 aa11.45□□□□□ -0.58
DDR1-270ENST00000513043 XCL1P47992 114 aa11.45□□□□□ -0.58
DDR1-270ENST00000513043 PGPEP1Q9NXJ5 209 aa11.45□□□□□ -0.58
DDR1-270ENST00000513043 CYSLTR1Q9Y271 337 aa11.45□□□□□ -0.58
DDR1-270ENST00000513043 TRAV13-1A0A0B4J241 112 aa11.44□□□□□ -0.58
DDR1-270ENST00000513043 K7EMI3 77 aa11.44□□□□□ -0.58
DDR1-270ENST00000513043 CCL25O15444 150 aa11.44□□□□□ -0.58
DDR1-270ENST00000513043 SS18Q15532 418 aa11.44□□□□□ -0.58
DDR1-270ENST00000513043 FA2HQ7L5A8 372 aa11.44□□□□□ -0.58
DDR1-270ENST00000513043 FAM104AQ969W3 186 aa11.44□□□□□ -0.58
DDR1-270ENST00000513043 IGLV5-52A0A0A0MRZ9 124 aa11.43□□□□□ -0.58
DDR1-270ENST00000513043 C18orf32Q8TCD1 76 aa11.43□□□□□ -0.58
DDR1-270ENST00000513043 CDPF1Q6NVV7 123 aa11.42□□□□□ -0.58
DDR1-270ENST00000513043 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
DDR1-270ENST00000513043 MRPS36P82909 103 aaKnown RBP11.41□□□□□ -0.58
DDR1-270ENST00000513043 FOXI1Q12951 378 aa11.41□□□□□ -0.58
DDR1-270ENST00000513043 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
DDR1-270ENST00000513043 PYGO1Q9Y3Y4 419 aa11.41□□□□□ -0.58
DDR1-270ENST00000513043 IFITM10A6NMD0 228 aa11.4□□□□□ -0.58
DDR1-270ENST00000513043 COLCA2A8K830 154 aa11.4□□□□□ -0.58
DDR1-270ENST00000513043 PRSS1P07477 247 aa11.4□□□□□ -0.58
DDR1-270ENST00000513043 C14orf177Q52M58 125 aa11.4□□□□□ -0.58
DDR1-270ENST00000513043 ZC2HC1BQ5TFG8 222 aa11.4□□□□□ -0.58
DDR1-270ENST00000513043 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
DDR1-270ENST00000513043 C1orf196B1AJZ1 125 aa11.39□□□□□ -0.59
DDR1-270ENST00000513043 TRGC2P03986 189 aa11.39□□□□□ -0.59
DDR1-270ENST00000513043 TOMM6Q96B49 74 aa11.39□□□□□ -0.59
DDR1-270ENST00000513043 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
DDR1-270ENST00000513043 TMEM141Q96I45 108 aa11.39□□□□□ -0.59
DDR1-270ENST00000513043 KRTAP17-1Q9BYP8 105 aa11.39□□□□□ -0.59
DDR1-270ENST00000513043 GCSHP23434 173 aa11.38□□□□□ -0.59
DDR1-270ENST00000513043 G0S2P27469 103 aa11.38□□□□□ -0.59
DDR1-270ENST00000513043 CD164L2Q6UWJ8 174 aa11.38□□□□□ -0.59
DDR1-270ENST00000513043 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
DDR1-270ENST00000513043 DYNC1H1Q14204 4646 aaKnown RBP11.37□□□□□ -0.59
DDR1-270ENST00000513043 hDV102S1A0JD36 115 aa11.37□□□□□ -0.59
DDR1-270ENST00000513043 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
DDR1-270ENST00000513043 LINC00614P0C842 121 aa11.37□□□□□ -0.59
DDR1-270ENST00000513043 KRTAP10-1P60331 282 aa11.37□□□□□ -0.59
DDR1-270ENST00000513043 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
DDR1-270ENST00000513043 Q6ZN92 141 aa11.37□□□□□ -0.59
DDR1-270ENST00000513043 C15orf56Q8N910 161 aa11.37□□□□□ -0.59
DDR1-270ENST00000513043 SCGB3A1Q96QR1 104 aa11.37□□□□□ -0.59
DDR1-270ENST00000513043 PMCHL1Q16048 86 aa11.36□□□□□ -0.59
DDR1-270ENST00000513043 HIGD2BQ4VC39 106 aa11.36□□□□□ -0.59
DDR1-270ENST00000513043 TEX43Q6ZNM6 134 aa11.36□□□□□ -0.59
DDR1-270ENST00000513043 PCLOQ9Y6V0 5065 aa11.36□□□□□ -0.59
DDR1-270ENST00000513043 CFAP161Q6P656 301 aa11.35□□□□□ -0.59
DDR1-270ENST00000513043 LINC00173Q6ZV60 143 aa11.35□□□□□ -0.59
DDR1-270ENST00000513043 C5orf38Q86SI9 138 aa11.35□□□□□ -0.59
DDR1-270ENST00000513043 VCX2Q9H322 139 aa11.35□□□□□ -0.59
DDR1-270ENST00000513043 RAB5BP61020 215 aa11.34□□□□□ -0.59
DDR1-270ENST00000513043 ERASQ7Z444 233 aa11.34□□□□□ -0.59
DDR1-270ENST00000513043 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
DDR1-270ENST00000513043 C2orf88Q9BSF0 95 aa11.34□□□□□ -0.59
DDR1-270ENST00000513043 DNAH5Q8TE73 4624 aa11.33□□□□□ -0.6
DDR1-270ENST00000513043 COX7A2LO14548 114 aa11.33□□□□□ -0.6
DDR1-270ENST00000513043 MALP21145 153 aa11.33□□□□□ -0.6
DDR1-270ENST00000513043 AMELXQ99217 191 aa11.33□□□□□ -0.6
DDR1-270ENST00000513043 A0A096LNJ9 63 aa11.32□□□□□ -0.6
DDR1-270ENST00000513043 ATP6V1G1O75348 118 aa11.32□□□□□ -0.6
DDR1-270ENST00000513043 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
DDR1-270ENST00000513043 IGHV1-58A0A0C4DH39 117 aa11.31□□□□□ -0.6
DDR1-270ENST00000513043 NPSP0C0P6 89 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms