RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 MRC2Q9UBG0 1479 aa1.51□□□□□ -2.17
RFC1-214ENST00000512726 Q0VG73 95 aa1.51□□□□□ -2.17
RFC1-214ENST00000512726 LINC01558Q9Y6Z2 57 aa1.51□□□□□ -2.17
RFC1-214ENST00000512726 ASXL3Q9C0F0 2248 aa1.5□□□□□ -2.17
RFC1-214ENST00000512726 S100A10P60903 97 aa1.5□□□□□ -2.17
RFC1-214ENST00000512726 CDC42SE2Q9NRR3 84 aa1.5□□□□□ -2.17
RFC1-214ENST00000512726 SBF2Q86WG5 1849 aa1.5□□□□□ -2.17
RFC1-214ENST00000512726 LRRC37A2A6NM11 1700 aa1.49□□□□□ -2.17
RFC1-214ENST00000512726 WNK3Q9BYP7 1800 aa1.48□□□□□ -2.17
RFC1-214ENST00000512726 TRAV22A0A0B4J277 110 aa1.48□□□□□ -2.17
RFC1-214ENST00000512726 CRYM-AS1A6NIL9 109 aa1.48□□□□□ -2.17
RFC1-214ENST00000512726 KDM5AP29375 1690 aaKnown RBP1.48□□□□□ -2.17
RFC1-214ENST00000512726 TOPAZ1Q8N9V7 1692 aa1.48□□□□□ -2.17
RFC1-214ENST00000512726 KCPQ6ZWJ8 1503 aa1.47□□□□□ -2.17
RFC1-214ENST00000512726 MEGF8Q7Z7M0 2845 aa1.47□□□□□ -2.17
RFC1-214ENST00000512726 SFT2D2O95562 160 aa1.47□□□□□ -2.17
RFC1-214ENST00000512726 COX6CP09669 75 aa1.47□□□□□ -2.17
RFC1-214ENST00000512726 UBE2D3P61077 147 aa1.47□□□□□ -2.17
RFC1-214ENST00000512726 UBE2D2P62837 147 aa1.47□□□□□ -2.17
RFC1-214ENST00000512726 COX6A2Q02221 97 aa1.47□□□□□ -2.17
RFC1-214ENST00000512726 PRO1854Q9UHT4 67 aa1.47□□□□□ -2.17
RFC1-214ENST00000512726 KDM3BQ7LBC6 1761 aa1.45□□□□□ -2.18
RFC1-214ENST00000512726 NXT2Q9NPJ8 142 aaKnown RBP1.45□□□□□ -2.18
RFC1-214ENST00000512726 CHD1O14646 1710 aa1.45□□□□□ -2.18
RFC1-214ENST00000512726 ABCC5O15440 1437 aa1.44□□□□□ -2.18
RFC1-214ENST00000512726 VPS8Q8N3P4 1428 aa1.44□□□□□ -2.18
RFC1-214ENST00000512726 hADV29S1A0JD25 119 aa1.44□□□□□ -2.18
RFC1-214ENST00000512726 ZNF815PA8K554 130 aa1.44□□□□□ -2.18
RFC1-214ENST00000512726 S100A8P05109 93 aa1.44□□□□□ -2.18
RFC1-214ENST00000512726 SSBP3-AS1Q7Z2R9 100 aa1.44□□□□□ -2.18
RFC1-214ENST00000512726 PLXNB2O15031 1838 aa1.44□□□□□ -2.18
RFC1-214ENST00000512726 APCP25054 2843 aa1.44□□□□□ -2.18
RFC1-214ENST00000512726 ARHGEF5Q12774 1597 aa1.43□□□□□ -2.18
RFC1-214ENST00000512726 TRAPPC2P0DI81 140 aa1.43□□□□□ -2.18
RFC1-214ENST00000512726 TRAPPC2BP0DI82 140 aa1.43□□□□□ -2.18
RFC1-214ENST00000512726 FAIMQ9NVQ4 179 aa1.43□□□□□ -2.18
RFC1-214ENST00000512726 SEC11AP67812 179 aa1.42□□□□□ -2.18
RFC1-214ENST00000512726 AP4S1Q9Y587 144 aa1.42□□□□□ -2.18
RFC1-214ENST00000512726 ARL2-SNX15V9GYD0 113 aa1.42□□□□□ -2.18
RFC1-214ENST00000512726 BDP1A6H8Y1 2624 aa1.41□□□□□ -2.18
RFC1-214ENST00000512726 TOP2BQ02880 1626 aa1.41□□□□□ -2.18
RFC1-214ENST00000512726 TTC28Q96AY4 2481 aa1.41□□□□□ -2.18
RFC1-214ENST00000512726 M0R143 59 aa1.41□□□□□ -2.18
RFC1-214ENST00000512726 HAMPP81172 84 aa1.41□□□□□ -2.18
RFC1-214ENST00000512726 EHBP1L1Q8N3D4 1523 aa1.4□□□□□ -2.18
RFC1-214ENST00000512726 DIP2CQ9Y2E4 1556 aa1.4□□□□□ -2.19
RFC1-214ENST00000512726 SHANK2Q9UPX8 1470 aa1.4□□□□□ -2.19
RFC1-214ENST00000512726 GNGT2O14610 69 aa1.4□□□□□ -2.19
RFC1-214ENST00000512726 MGPP08493 103 aa1.4□□□□□ -2.19
RFC1-214ENST00000512726 NCMAPQ5T1S8 102 aa1.4□□□□□ -2.19
RFC1-214ENST00000512726 LINC00472Q9H8W2 130 aa1.4□□□□□ -2.19
RFC1-214ENST00000512726 HMGXB3Q12766 1538 aa1.4□□□□□ -2.19
RFC1-214ENST00000512726 CACNA1EQ15878 2313 aa1.39□□□□□ -2.19
RFC1-214ENST00000512726 CACNA1CQ13936 2221 aa1.39□□□□□ -2.19
RFC1-214ENST00000512726 AHCTF1Q8WYP5 2266 aa1.39□□□□□ -2.19
RFC1-214ENST00000512726 RAPGEF6Q8TEU7 1601 aa1.39□□□□□ -2.19
RFC1-214ENST00000512726 FAM208BQ5VWN6 2430 aa1.39□□□□□ -2.19
RFC1-214ENST00000512726 BTAF1O14981 1849 aa1.38□□□□□ -2.19
RFC1-214ENST00000512726 IGLC1P0CG04 106 aa1.38□□□□□ -2.19
RFC1-214ENST00000512726 SFTA2Q6UW10 78 aa1.38□□□□□ -2.19
RFC1-214ENST00000512726 FAM223AQ8IWN6 122 aa1.38□□□□□ -2.19
RFC1-214ENST00000512726 LINC00032P0C843 101 aa1.37□□□□□ -2.19
RFC1-214ENST00000512726 A0A0D9SFI3 127 aa1.36□□□□□ -2.19
RFC1-214ENST00000512726 MPC2O95563 127 aa1.36□□□□□ -2.19
RFC1-214ENST00000512726 S100A3P33764 101 aa1.36□□□□□ -2.19
RFC1-214ENST00000512726 Q6JHZ5 121 aa1.36□□□□□ -2.19
RFC1-214ENST00000512726 FRAS1Q86XX4 4008 aa1.36□□□□□ -2.19
RFC1-214ENST00000512726 CCNB3Q8WWL7 1395 aa1.35□□□□□ -2.19
RFC1-214ENST00000512726 MT-ATP8P03928 68 aa1.35□□□□□ -2.19
RFC1-214ENST00000512726 GAPVD1Q14C86 1478 aa1.35□□□□□ -2.19
RFC1-214ENST00000512726 FYCO1Q9BQS8 1478 aa1.35□□□□□ -2.19
RFC1-214ENST00000512726 NDUFC1O43677 76 aa1.34□□□□□ -2.19
RFC1-214ENST00000512726 DPY30Q9C005 99 aa1.34□□□□□ -2.19
RFC1-214ENST00000512726 TEX14Q8IWB6 1497 aa1.34□□□□□ -2.19
RFC1-214ENST00000512726 LRP6O75581 1613 aa1.33□□□□□ -2.2
RFC1-214ENST00000512726 PRH1P02810 166 aa1.33□□□□□ -2.2
RFC1-214ENST00000512726 SPINK6Q6UWN8 80 aa1.33□□□□□ -2.2
RFC1-214ENST00000512726 POLQO75417 2590 aa1.33□□□□□ -2.2
RFC1-214ENST00000512726 F8P00451 2351 aa1.33□□□□□ -2.2
RFC1-214ENST00000512726 PMCHL2Q9BQD1 86 aa1.32□□□□□ -2.2
RFC1-214ENST00000512726 CNFNQ9BYD5 112 aa1.32□□□□□ -2.2
RFC1-214ENST00000512726 ERCC6L2Q5T890 1561 aa1.32□□□□□ -2.2
RFC1-214ENST00000512726 SCN7AQ01118 1682 aa1.32□□□□□ -2.2
RFC1-214ENST00000512726 MYO7BQ6PIF6 2116 aa1.31□□□□□ -2.2
RFC1-214ENST00000512726 ABCA12Q86UK0 2595 aa1.31□□□□□ -2.2
RFC1-214ENST00000512726 SAA2P0DJI9 122 aaPredicted RBP1.31□□□□□ -2.2
RFC1-214ENST00000512726 AKAP12Q02952 1782 aa1.31□□□□□ -2.2
RFC1-214ENST00000512726 ABCC10Q5T3U5 1492 aa1.31□□□□□ -2.2
RFC1-214ENST00000512726 M0R3E3 92 aa1.3□□□□□ -2.2
RFC1-214ENST00000512726 PKIAP61925 76 aa1.3□□□□□ -2.2
RFC1-214ENST00000512726 SPRR4Q96PI1 79 aa1.3□□□□□ -2.2
RFC1-214ENST00000512726 PRDM15P57071 1507 aaPredicted RBP1.3□□□□□ -2.2
RFC1-214ENST00000512726 TNCP24821 2201 aa1.3□□□□□ -2.2
RFC1-214ENST00000512726 UBA52P62987 128 aaKnown RBP1.29□□□□□ -2.2
RFC1-214ENST00000512726 COL5A1-AS1Q5SY13 56 aa1.29□□□□□ -2.2
RFC1-214ENST00000512726 SMR3AQ99954 134 aa1.29□□□□□ -2.2
RFC1-214ENST00000512726 A0A1B0GWA3 101 aa1.28□□□□□ -2.2
RFC1-214ENST00000512726 FAM223BA6NKX1 122 aa1.28□□□□□ -2.2
RFC1-214ENST00000512726 TMEM263Q8WUH6 116 aaKnown RBP1.28□□□□□ -2.2
RFC1-214ENST00000512726 PDCD11Q14690 1871 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms