RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 CEBPGP53567 150 aa5.77□□□□□ -1.49
NEDD9-213ENST00000512665 PNRC1Q12796 327 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-213ENST00000512665 ASB16-AS1Q495Z4 193 aa5.77□□□□□ -1.49
NEDD9-213ENST00000512665 C10orf91Q5T1B1 145 aa5.77□□□□□ -1.49
NEDD9-213ENST00000512665 RPP21Q9H633 154 aaKnown RBP5.77□□□□□ -1.49
NEDD9-213ENST00000512665 PHLDA3Q9Y5J5 127 aa5.77□□□□□ -1.49
NEDD9-213ENST00000512665 TMSB15BA0A087X1C1 80 aa5.76□□□□□ -1.49
NEDD9-213ENST00000512665 GATCO43716 136 aaKnown RBP5.76□□□□□ -1.49
NEDD9-213ENST00000512665 CTRLP40313 264 aa5.76□□□□□ -1.49
NEDD9-213ENST00000512665 PTTG1IPP53801 180 aa5.76□□□□□ -1.49
NEDD9-213ENST00000512665 ZFP82Q8N141 532 aa5.76□□□□□ -1.49
NEDD9-213ENST00000512665 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.76□□□□□ -1.49
NEDD9-213ENST00000512665 SFRP2Q96HF1 295 aa5.76□□□□□ -1.49
NEDD9-213ENST00000512665 SEC11CQ9BY50 192 aa5.76□□□□□ -1.49
NEDD9-213ENST00000512665 V9GYV3 84 aa5.76□□□□□ -1.49
NEDD9-213ENST00000512665 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
NEDD9-213ENST00000512665 AMTP48728 403 aa5.75□□□□□ -1.49
NEDD9-213ENST00000512665 HIGD2BQ4VC39 106 aa5.75□□□□□ -1.49
NEDD9-213ENST00000512665 FAM74A4Q5TZK3 123 aa5.75□□□□□ -1.49
NEDD9-213ENST00000512665 NTM-AS1Q6ZSK4 140 aa5.75□□□□□ -1.49
NEDD9-213ENST00000512665 COMMD7Q86VX2 200 aa5.75□□□□□ -1.49
NEDD9-213ENST00000512665 C20orf203Q8NBC4 194 aa5.75□□□□□ -1.49
NEDD9-213ENST00000512665 OR10AG1Q8NH19 301 aa5.75□□□□□ -1.49
NEDD9-213ENST00000512665 TSKUQ8WUA8 353 aa5.75□□□□□ -1.49
NEDD9-213ENST00000512665 TRBV25-1A0A075B6N4 114 aa5.74□□□□□ -1.49
NEDD9-213ENST00000512665 A0A1B0GUV1 79 aa5.74□□□□□ -1.49
NEDD9-213ENST00000512665 ADCYAP1P18509 176 aa5.74□□□□□ -1.49
NEDD9-213ENST00000512665 MT1HP80294 61 aa5.74□□□□□ -1.49
NEDD9-213ENST00000512665 ADIRFQ15847 76 aa5.74□□□□□ -1.49
NEDD9-213ENST00000512665 IQCJQ1A5X6 159 aa5.74□□□□□ -1.49
NEDD9-213ENST00000512665 LYZL1Q6UWQ5 148 aa5.74□□□□□ -1.49
NEDD9-213ENST00000512665 KRTAP4-1Q9BYQ7 146 aa5.74□□□□□ -1.49
NEDD9-213ENST00000512665 A0A1W2PNN7 141 aa5.73□□□□□ -1.49
NEDD9-213ENST00000512665 SMIM27A0A1W2PRY6 76 aa5.73□□□□□ -1.49
NEDD9-213ENST00000512665 PPP1R2P9O14990 202 aa5.73□□□□□ -1.49
NEDD9-213ENST00000512665 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
NEDD9-213ENST00000512665 GAGE6Q13070 117 aa5.73□□□□□ -1.49
NEDD9-213ENST00000512665 NEXN-AS1Q8NBZ9 246 aa5.73□□□□□ -1.49
NEDD9-213ENST00000512665 USH2AO75445 5202 aa5.72□□□□□ -1.49
NEDD9-213ENST00000512665 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
NEDD9-213ENST00000512665 IGLV7-46A0A075B6I9 117 aa5.72□□□□□ -1.49
NEDD9-213ENST00000512665 HIGD1CA8MV81 97 aa5.72□□□□□ -1.49
NEDD9-213ENST00000512665 F8W036 122 aa5.72□□□□□ -1.49
NEDD9-213ENST00000512665 M0R381 172 aa5.72□□□□□ -1.49
NEDD9-213ENST00000512665 NTF3P20783 257 aa5.72□□□□□ -1.49
NEDD9-213ENST00000512665 SPANXN1Q5VSR9 72 aa5.72□□□□□ -1.49
NEDD9-213ENST00000512665 ANAPC16Q96DE5 110 aa5.72□□□□□ -1.49
NEDD9-213ENST00000512665 CARD19Q96LW7 228 aa5.72□□□□□ -1.49
NEDD9-213ENST00000512665 A0A1B0GUT8 65 aa5.71□□□□□ -1.5
NEDD9-213ENST00000512665 MT-ND4LP03901 98 aa5.71□□□□□ -1.5
NEDD9-213ENST00000512665 TRGC1P0CF51 173 aa5.71□□□□□ -1.5
NEDD9-213ENST00000512665 RAB4BP61018 213 aa5.71□□□□□ -1.5
NEDD9-213ENST00000512665 NUP35Q8NFH5 326 aa5.71□□□□□ -1.5
NEDD9-213ENST00000512665 AP1S3Q96PC3 154 aa5.71□□□□□ -1.5
NEDD9-213ENST00000512665 TMEM242Q9NWH2 141 aa5.71□□□□□ -1.5
NEDD9-213ENST00000512665 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.5
NEDD9-213ENST00000512665 GAGE12HA6NDE8 117 aa5.7□□□□□ -1.5
NEDD9-213ENST00000512665 CTAG1AP78358 180 aa5.7□□□□□ -1.5
NEDD9-213ENST00000512665 C9orf116Q5BN46 136 aaPredicted RBP5.7□□□□□ -1.5
NEDD9-213ENST00000512665 IMMP2LQ96T52 175 aa5.7□□□□□ -1.5
NEDD9-213ENST00000512665 RETNLBQ9BQ08 111 aa5.7□□□□□ -1.5
NEDD9-213ENST00000512665 CTDSP1Q9GZU7 261 aa5.7□□□□□ -1.5
NEDD9-213ENST00000512665 NAT8BQ9UHF3 227 aa5.7□□□□□ -1.5
NEDD9-213ENST00000512665 IGLV4-60A0A075B6I1 120 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 IGHV1-24A0A0C4DH33 117 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 LOC107984640A0A0U1RRK4 108 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 MUC21A0A140T8X8 626 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 A0A1B0GW15 77 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 TWIST1Q15672 202 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 NDUFA5Q16718 116 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 GATD1Q8NB37 220 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 PGLYRP4Q96LB8 373 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 TPPP3Q9BW30 176 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 TMEM191AQ9H0A3 160 aa5.69□□□□□ -1.5
NEDD9-213ENST00000512665 A0A1B0GXF2 115 aa5.68□□□□□ -1.5
NEDD9-213ENST00000512665 M0QY20 66 aa5.68□□□□□ -1.5
NEDD9-213ENST00000512665 SMIM17P0DL12 118 aa5.68□□□□□ -1.5
NEDD9-213ENST00000512665 FGF6P10767 208 aa5.68□□□□□ -1.5
NEDD9-213ENST00000512665 RIGQ13278 110 aa5.68□□□□□ -1.5
NEDD9-213ENST00000512665 RHEBQ15382 184 aa5.68□□□□□ -1.5
NEDD9-213ENST00000512665 PHF5AQ7RTV0 110 aaKnown RBP5.68□□□□□ -1.5
NEDD9-213ENST00000512665 ATP5L2Q7Z4Y8 100 aa5.68□□□□□ -1.5
NEDD9-213ENST00000512665 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
NEDD9-213ENST00000512665 TRAV9-1A0A075B6T8 112 aa5.67□□□□□ -1.5
NEDD9-213ENST00000512665 A0A087WZ39 114 aa5.67□□□□□ -1.5
NEDD9-213ENST00000512665 C7orf77A4D0Y5 90 aa5.67□□□□□ -1.5
NEDD9-213ENST00000512665 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
NEDD9-213ENST00000512665 SMIM15Q7Z3B0 74 aa5.67□□□□□ -1.5
NEDD9-213ENST00000512665 BORCS7Q96B45 105 aa5.67□□□□□ -1.5
NEDD9-213ENST00000512665 S100A8P05109 93 aa5.66□□□□□ -1.5
NEDD9-213ENST00000512665 SYCNQ0VAF6 134 aa5.66□□□□□ -1.5
NEDD9-213ENST00000512665 GAGE2BQ13066 116 aa5.66□□□□□ -1.5
NEDD9-213ENST00000512665 SUMO4Q6EEV6 95 aa5.66□□□□□ -1.5
NEDD9-213ENST00000512665 RASL11AQ6T310 242 aa5.66□□□□□ -1.5
NEDD9-213ENST00000512665 LINC00173Q6ZV60 143 aa5.66□□□□□ -1.5
NEDD9-213ENST00000512665 SLC7A5P1Q8MH63 180 aa5.66□□□□□ -1.5
NEDD9-213ENST00000512665 SVBPQ8N300 66 aa5.66□□□□□ -1.5
NEDD9-213ENST00000512665 BTF3L4Q96K17 158 aa5.66□□□□□ -1.5
NEDD9-213ENST00000512665 PPDPFQ9H3Y8 114 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms