RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 DEFB131BA0A096LNP1 70 aa7.27□□□□□ -1.25
PDLIM5-217ENST00000512274 IGHV3-73A0A0B4J1V6 119 aa7.27□□□□□ -1.25
PDLIM5-217ENST00000512274 H7C423 109 aa7.27□□□□□ -1.25
PDLIM5-217ENST00000512274 SMAGPQ0VAQ4 97 aa7.27□□□□□ -1.25
PDLIM5-217ENST00000512274 COTL1Q14019 142 aa7.27□□□□□ -1.25
PDLIM5-217ENST00000512274 PAPPA-AS1Q5QFB9 102 aa7.27□□□□□ -1.25
PDLIM5-217ENST00000512274 CELA1Q9UNI1 258 aa7.27□□□□□ -1.25
PDLIM5-217ENST00000512274 DMBT1Q9UGM3 2413 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 TRAV9-2A0A087WT02 112 aa7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 TRGV4A0A0C4DH28 118 aa7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 H3BNG1 76 aa7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 ATP5G1P05496 136 aa7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 ODF1Q14990 250 aa7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 CDPF1Q6NVV7 123 aa7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 MRPL52Q86TS9 123 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 SCGB3A1Q96QR1 104 aa7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 CHCHD7Q9BUK0 85 aa7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 SPANXA1Q9NS26 97 aa7.26□□□□□ -1.25
PDLIM5-217ENST00000512274 A0A087WX48 190 aa7.25□□□□□ -1.25
PDLIM5-217ENST00000512274 DAD1P61803 113 aa7.25□□□□□ -1.25
PDLIM5-217ENST00000512274 PKIAP61925 76 aa7.25□□□□□ -1.25
PDLIM5-217ENST00000512274 MRPS36P82909 103 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-217ENST00000512274 SH2D6Q7Z4S9 175 aa7.25□□□□□ -1.25
PDLIM5-217ENST00000512274 ZNF664Q8N3J9 261 aa7.25□□□□□ -1.25
PDLIM5-217ENST00000512274 ZNRF2Q8NHG8 242 aa7.25□□□□□ -1.25
PDLIM5-217ENST00000512274 VAMP8Q9BV40 100 aa7.25□□□□□ -1.25
PDLIM5-217ENST00000512274 HHLA3Q9XRX5 114 aa7.25□□□□□ -1.25
PDLIM5-217ENST00000512274 F8VRH5 84 aa7.24□□□□□ -1.25
PDLIM5-217ENST00000512274 DEFB130BP0DP73 79 aa7.24□□□□□ -1.25
PDLIM5-217ENST00000512274 DEFB130AP0DP74 79 aa7.24□□□□□ -1.25
PDLIM5-217ENST00000512274 PLNP26678 52 aa7.24□□□□□ -1.25
PDLIM5-217ENST00000512274 Q6ZN92 141 aa7.24□□□□□ -1.25
PDLIM5-217ENST00000512274 NEGR1Q7Z3B1 354 aa7.24□□□□□ -1.25
PDLIM5-217ENST00000512274 BAALCQ8WXS3 180 aa7.24□□□□□ -1.25
PDLIM5-217ENST00000512274 Q9UF83 564 aa7.24□□□□□ -1.25
PDLIM5-217ENST00000512274 TSTD3H0UI37 97 aa7.23□□□□□ -1.25
PDLIM5-217ENST00000512274 J3QL48 77 aa7.23□□□□□ -1.25
PDLIM5-217ENST00000512274 PRSS1P07477 247 aa7.23□□□□□ -1.25
PDLIM5-217ENST00000512274 TIRAPP58753 221 aa7.23□□□□□ -1.25
PDLIM5-217ENST00000512274 PMVKQ15126 192 aa7.23□□□□□ -1.25
PDLIM5-217ENST00000512274 AMELXQ99217 191 aa7.23□□□□□ -1.25
PDLIM5-217ENST00000512274 UBR4Q5T4S7 5183 aa7.23□□□□□ -1.25
PDLIM5-217ENST00000512274 DPM2O94777 84 aa7.22□□□□□ -1.25
PDLIM5-217ENST00000512274 ZNF25P17030 456 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-217ENST00000512274 C12orf74Q32Q52 190 aa7.22□□□□□ -1.25
PDLIM5-217ENST00000512274 NTM-AS1Q6ZSK4 140 aa7.22□□□□□ -1.25
PDLIM5-217ENST00000512274 UBE2D4Q9Y2X8 147 aa7.22□□□□□ -1.25
PDLIM5-217ENST00000512274 IGLV4-3A0A075B6K6 122 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 GAGE12JA6NER3 117 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 HSBP1L1C9JCN9 74 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 RPL39P62891 51 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 GAGE1Q13065 139 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 GAGE4Q13068 117 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 GAGE5Q13069 117 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 GAGE13Q4V321 117 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 Q5VSD8 79 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 FAM19A3Q7Z5A8 133 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 NFE4Q86UQ8 179 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 FAM104AQ969W3 186 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 CST9LQ9H4G1 147 aa7.21□□□□□ -1.26
PDLIM5-217ENST00000512274 TRBV25-1A0A075B6N4 114 aa7.2□□□□□ -1.26
PDLIM5-217ENST00000512274 TRBV6-8A0A0A6YYG3 113 aa7.2□□□□□ -1.26
PDLIM5-217ENST00000512274 PAX4O43316 350 aa7.2□□□□□ -1.26
PDLIM5-217ENST00000512274 IGKCP01834 107 aa7.2□□□□□ -1.26
PDLIM5-217ENST00000512274 VSIG2Q96IQ7 327 aa7.2□□□□□ -1.26
PDLIM5-217ENST00000512274 TMEM243Q9BU79 118 aa7.2□□□□□ -1.26
PDLIM5-217ENST00000512274 DLEU1O43261 78 aa7.19□□□□□ -1.26
PDLIM5-217ENST00000512274 IGLC3P0DOY3 106 aa7.19□□□□□ -1.26
PDLIM5-217ENST00000512274 GYPEP15421 78 aa7.19□□□□□ -1.26
PDLIM5-217ENST00000512274 KRTAP10-2P60368 255 aa7.19□□□□□ -1.26
PDLIM5-217ENST00000512274 MRPL23Q16540 153 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-217ENST00000512274 SPATA45Q537H7 98 aa7.19□□□□□ -1.26
PDLIM5-217ENST00000512274 ATP6V0E2Q8NHE4 81 aa7.19□□□□□ -1.26
PDLIM5-217ENST00000512274 MRPL35Q9NZE8 188 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-217ENST00000512274 CHTOPQ9Y3Y2 248 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-217ENST00000512274 IGLV4-69A0A075B6H9 119 aa7.18□□□□□ -1.26
PDLIM5-217ENST00000512274 A0A1B0GUV1 79 aa7.18□□□□□ -1.26
PDLIM5-217ENST00000512274 HTN3P15516 51 aa7.18□□□□□ -1.26
PDLIM5-217ENST00000512274 C6orf223Q8N319 242 aa7.18□□□□□ -1.26
PDLIM5-217ENST00000512274 MIEN1Q9BRT3 115 aa7.18□□□□□ -1.26
PDLIM5-217ENST00000512274 UQCR10Q9UDW1 63 aa7.18□□□□□ -1.26
PDLIM5-217ENST00000512274 PAM16Q9Y3D7 125 aa7.18□□□□□ -1.26
PDLIM5-217ENST00000512274 IGHV3-38A0A0C4DH36 116 aa7.17□□□□□ -1.26
PDLIM5-217ENST00000512274 LOC100131303A0A0U1RQF7 123 aa7.17□□□□□ -1.26
PDLIM5-217ENST00000512274 C11orf86A6NJI1 115 aa7.17□□□□□ -1.26
PDLIM5-217ENST00000512274 DDTP30046 118 aa7.17□□□□□ -1.26
PDLIM5-217ENST00000512274 PMCHL2Q9BQD1 86 aa7.17□□□□□ -1.26
PDLIM5-217ENST00000512274 VCX2Q9H322 139 aa7.17□□□□□ -1.26
PDLIM5-217ENST00000512274 ICOSQ9Y6W8 199 aa7.17□□□□□ -1.26
PDLIM5-217ENST00000512274 LRP1BQ9NZR2 4599 aa7.17□□□□□ -1.26
PDLIM5-217ENST00000512274 H0Y8G0 127 aa7.16□□□□□ -1.26
PDLIM5-217ENST00000512274 FGF6P10767 208 aa7.16□□□□□ -1.26
PDLIM5-217ENST00000512274 SEC11AP67812 179 aa7.16□□□□□ -1.26
PDLIM5-217ENST00000512274 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
PDLIM5-217ENST00000512274 CDC42SE2Q9NRR3 84 aa7.16□□□□□ -1.26
PDLIM5-217ENST00000512274 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-217ENST00000512274 FLG2Q5D862 2391 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-217ENST00000512274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-217ENST00000512274 IGLV5-45A0A087WSX0 123 aa7.15□□□□□ -1.26
PDLIM5-217ENST00000512274 TINCRA0A1B0GVN0 87 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms