RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 C1orf43Q9BWL3 253 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 GTSF1LQ9H1H1 148 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 VCX2Q9H322 139 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 PRO1933Q9H354 126 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.69□□□□□ -1.5
HTT-209ENST00000512068 A0A0J9YWU9 116 aa5.69□□□□□ -1.5
HTT-209ENST00000512068 A0A0J9YY99 117 aa5.69□□□□□ -1.5
HTT-209ENST00000512068 LOC100131303A0A0U1RQF7 123 aa5.69□□□□□ -1.5
HTT-209ENST00000512068 IGKV2-29A2NJV5 120 aaPredicted RBP5.69□□□□□ -1.5
HTT-209ENST00000512068 F8VRH5 84 aa5.69□□□□□ -1.5
HTT-209ENST00000512068 NPSP0C0P6 89 aa5.69□□□□□ -1.5
HTT-209ENST00000512068 SBSPONQ8IVN8 264 aa5.69□□□□□ -1.5
HTT-209ENST00000512068 CHCHD7Q9BUK0 85 aa5.69□□□□□ -1.5
HTT-209ENST00000512068 PYGO1Q9Y3Y4 419 aa5.69□□□□□ -1.5
HTT-209ENST00000512068 ICOSQ9Y6W8 199 aa5.69□□□□□ -1.5
HTT-209ENST00000512068 TRAV26-1A0A087WT03 109 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 IGIPA6NJ69 53 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 H7C423 109 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 PTTG1IPP53801 180 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 HERVK_113P61574 105 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 MRPL23Q16540 153 aaKnown RBP5.68□□□□□ -1.5
HTT-209ENST00000512068 ZNF664Q8N3J9 261 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 OR5A1Q8NGJ0 315 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 C11orf45Q8TAV5 145 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 CHCHD5Q9BSY4 110 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 MRPL35Q9NZE8 188 aaKnown RBP5.68□□□□□ -1.5
HTT-209ENST00000512068 Q9UF83 564 aa5.68□□□□□ -1.5
HTT-209ENST00000512068 TRRAPQ9Y4A5 3859 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 IGLV4-3A0A075B6K6 122 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 hDV102S1A0JD36 115 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 KRTAP9-7A8MTY7 169 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 C12orf74Q32Q52 190 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 TM2D3Q9BRN9 247 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 TIMM21Q9BVV7 248 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 KRTAP9-9Q9BYP9 154 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 UQCR10Q9UDW1 63 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 UBE2D4Q9Y2X8 147 aa5.67□□□□□ -1.5
HTT-209ENST00000512068 A0A096LPF7 62 aa5.66□□□□□ -1.5
HTT-209ENST00000512068 TRBV6-8A0A0A6YYG3 113 aa5.66□□□□□ -1.5
HTT-209ENST00000512068 GAGE12HA6NDE8 117 aa5.66□□□□□ -1.5
HTT-209ENST00000512068 LINC00694P0DN24 101 aa5.66□□□□□ -1.5
HTT-209ENST00000512068 FGF6P10767 208 aa5.66□□□□□ -1.5
HTT-209ENST00000512068 ZNF25P17030 456 aaPredicted RBP5.66□□□□□ -1.5
HTT-209ENST00000512068 CST9LQ9H4G1 147 aa5.66□□□□□ -1.5
HTT-209ENST00000512068 TMEM262E9PQX1 116 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 DDTP30046 118 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 NMUP48645 174 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 HNRNPA3P51991 378 aaKnown RBP5.65□□□□□ -1.5
HTT-209ENST00000512068 SEC11AP67812 179 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 MRPS36P82909 103 aaKnown RBP5.65□□□□□ -1.5
HTT-209ENST00000512068 GAGE6Q13070 117 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 MAJINQ3KP22 176 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 KRTAP21-3Q3LHN1 58 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 TMEM170BQ5T4T1 132 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 ZC2HC1BQ5TFG8 222 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 Q6ZTC4 211 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 Q6ZUT4 128 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 MRPL52Q86TS9 123 aaKnown RBP5.65□□□□□ -1.5
HTT-209ENST00000512068 OPRPNQ99935 248 aaPredicted RBP5.65□□□□□ -1.5
HTT-209ENST00000512068 CHAC1Q9BUX1 264 aa5.65□□□□□ -1.5
HTT-209ENST00000512068 GEMIN7Q9H840 131 aaKnown RBP5.65□□□□□ -1.5
HTT-209ENST00000512068 CSDC2Q9Y534 153 aaKnown RBP5.65□□□□□ -1.5
HTT-209ENST00000512068 DEFB131BA0A096LNP1 70 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 TRAV10A0A0B4J240 114 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 H3BNG1 76 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 NANOS2P60321 138 aaKnown RBP5.64□□□□□ -1.51
HTT-209ENST00000512068 DEFA6Q01524 100 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 SLC25A34Q6PIV7 304 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 CEMP1Q6PRD7 247 aaPredicted RBP5.64□□□□□ -1.51
HTT-209ENST00000512068 NTM-AS1Q6ZSK4 140 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 STPG4Q8N801 248 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 C14orf144Q96I85 54 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 VSIG2Q96IQ7 327 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 B9D2Q9BPU9 175 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 MIEN1Q9BRT3 115 aa5.64□□□□□ -1.51
HTT-209ENST00000512068 TRAV8-6A0A0B4J262 113 aa5.63□□□□□ -1.51
HTT-209ENST00000512068 H3BRM9 83 aa5.63□□□□□ -1.51
HTT-209ENST00000512068 IGLC3P0DOY3 106 aa5.63□□□□□ -1.51
HTT-209ENST00000512068 TCTAP57738 103 aa5.63□□□□□ -1.51
HTT-209ENST00000512068 RNASE13Q5GAN3 156 aaKnown RBP5.63□□□□□ -1.51
HTT-209ENST00000512068 AMELXQ99217 191 aa5.63□□□□□ -1.51
HTT-209ENST00000512068 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
HTT-209ENST00000512068 COX8AP10176 69 aa5.62□□□□□ -1.51
HTT-209ENST00000512068 HERVK_113P63121 156 aa5.62□□□□□ -1.51
HTT-209ENST00000512068 LELP1Q5T871 98 aa5.62□□□□□ -1.51
HTT-209ENST00000512068 NFE4Q86UQ8 179 aa5.62□□□□□ -1.51
HTT-209ENST00000512068 LINC00469Q8N7U9 141 aa5.62□□□□□ -1.51
HTT-209ENST00000512068 IGLV4-69A0A075B6H9 119 aa5.61□□□□□ -1.51
HTT-209ENST00000512068 TRAV13-1A0A0B4J241 112 aa5.61□□□□□ -1.51
HTT-209ENST00000512068 IGKV3OR2-268A0A0C4DH90 116 aa5.61□□□□□ -1.51
HTT-209ENST00000512068 A0A0J9YXV3 536 aa5.61□□□□□ -1.51
HTT-209ENST00000512068 TINCRA0A1B0GVN0 87 aa5.61□□□□□ -1.51
HTT-209ENST00000512068 NHLRC4P0CG21 123 aaPredicted RBP5.61□□□□□ -1.51
HTT-209ENST00000512068 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
HTT-209ENST00000512068 C15orf53Q8NAA6 179 aa5.61□□□□□ -1.51
HTT-209ENST00000512068 CDC42SE2Q9NRR3 84 aa5.61□□□□□ -1.51
HTT-209ENST00000512068 NBEAL2Q6ZNJ1 2754 aa5.6□□□□□ -1.51
HTT-209ENST00000512068 ANK2Q01484 3957 aa5.6□□□□□ -1.51
HTT-209ENST00000512068 NOTCH1P46531 2555 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms