RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 IGLV4-69A0A075B6H9 119 aa10.6□□□□□ -0.71
SCLT1-209ENST00000511426 SEC11AP67812 179 aa10.6□□□□□ -0.71
SCLT1-209ENST00000511426 MAJINQ3KP22 176 aa10.6□□□□□ -0.71
SCLT1-209ENST00000511426 ZC2HC1BQ5TFG8 222 aa10.6□□□□□ -0.71
SCLT1-209ENST00000511426 AMMECR1LQ6DCA0 310 aa10.6□□□□□ -0.71
SCLT1-209ENST00000511426 MRAPQ8TCY5 172 aa10.6□□□□□ -0.71
SCLT1-209ENST00000511426 Q6ZTC4 211 aa10.59□□□□□ -0.71
SCLT1-209ENST00000511426 FAM104AQ969W3 186 aa10.59□□□□□ -0.71
SCLT1-209ENST00000511426 A0A0J9YY99 117 aa10.58□□□□□ -0.72
SCLT1-209ENST00000511426 C11orf86A6NJI1 115 aa10.58□□□□□ -0.72
SCLT1-209ENST00000511426 HTN3P15516 51 aa10.58□□□□□ -0.72
SCLT1-209ENST00000511426 HERVK_113P61574 105 aa10.58□□□□□ -0.72
SCLT1-209ENST00000511426 Q6ZUT4 128 aa10.58□□□□□ -0.72
SCLT1-209ENST00000511426 A0A1B0GUV1 79 aa10.57□□□□□ -0.72
SCLT1-209ENST00000511426 DLEU1O43261 78 aa10.57□□□□□ -0.72
SCLT1-209ENST00000511426 COX8AP10176 69 aa10.57□□□□□ -0.72
SCLT1-209ENST00000511426 FAM19A3Q7Z5A8 133 aa10.57□□□□□ -0.72
SCLT1-209ENST00000511426 CHCHD5Q9BSY4 110 aa10.57□□□□□ -0.72
SCLT1-209ENST00000511426 CDC42SE2Q9NRR3 84 aa10.57□□□□□ -0.72
SCLT1-209ENST00000511426 NHLRC4P0CG21 123 aaPredicted RBP10.57□□□□□ -0.72
SCLT1-209ENST00000511426 SLC25A34Q6PIV7 304 aa10.57□□□□□ -0.72
SCLT1-209ENST00000511426 STPG4Q8N801 248 aa10.57□□□□□ -0.72
SCLT1-209ENST00000511426 OPRPNQ99935 248 aaPredicted RBP10.57□□□□□ -0.72
SCLT1-209ENST00000511426 A0A096LPF7 62 aa10.56□□□□□ -0.72
SCLT1-209ENST00000511426 TRAV10A0A0B4J240 114 aa10.56□□□□□ -0.72
SCLT1-209ENST00000511426 TINCRA0A1B0GVN0 87 aa10.56□□□□□ -0.72
SCLT1-209ENST00000511426 ANKRD39Q53RE8 183 aa10.56□□□□□ -0.72
SCLT1-209ENST00000511426 LELP1Q5T871 98 aa10.56□□□□□ -0.72
SCLT1-209ENST00000511426 CEMP1Q6PRD7 247 aaPredicted RBP10.56□□□□□ -0.72
SCLT1-209ENST00000511426 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
SCLT1-209ENST00000511426 DEFB131BA0A096LNP1 70 aa10.55□□□□□ -0.72
SCLT1-209ENST00000511426 E9PLD3 99 aa10.55□□□□□ -0.72
SCLT1-209ENST00000511426 UBE2D1P51668 147 aa10.55□□□□□ -0.72
SCLT1-209ENST00000511426 C15orf53Q8NAA6 179 aa10.53□□□□□ -0.72
SCLT1-209ENST00000511426 C14orf144Q96I85 54 aa10.53□□□□□ -0.72
SCLT1-209ENST00000511426 CCL25O15444 150 aa10.53□□□□□ -0.72
SCLT1-209ENST00000511426 NANOS2P60321 138 aaKnown RBP10.53□□□□□ -0.72
SCLT1-209ENST00000511426 HERVK_113P63121 156 aa10.53□□□□□ -0.72
SCLT1-209ENST00000511426 GAGE6Q13070 117 aa10.53□□□□□ -0.72
SCLT1-209ENST00000511426 BOD1L2Q8IYS8 172 aa10.53□□□□□ -0.72
SCLT1-209ENST00000511426 MRPS16Q9Y3D3 137 aaKnown RBP10.53□□□□□ -0.72
SCLT1-209ENST00000511426 IGLV5-45A0A087WSX0 123 aa10.52□□□□□ -0.73
SCLT1-209ENST00000511426 SIVA1O15304 175 aa10.52□□□□□ -0.73
SCLT1-209ENST00000511426 HNRNPA3P51991 378 aaKnown RBP10.52□□□□□ -0.73
SCLT1-209ENST00000511426 TMEM170BQ5T4T1 132 aa10.52□□□□□ -0.73
SCLT1-209ENST00000511426 NBEAL2Q6ZNJ1 2754 aa10.52□□□□□ -0.73
SCLT1-209ENST00000511426 MGAM2Q2M2H8 2515 aa10.52□□□□□ -0.73
SCLT1-209ENST00000511426 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
SCLT1-209ENST00000511426 ZNF22P17026 224 aaPredicted RBP10.51□□□□□ -0.73
SCLT1-209ENST00000511426 NMUP48645 174 aa10.51□□□□□ -0.73
SCLT1-209ENST00000511426 DEFA6Q01524 100 aa10.51□□□□□ -0.73
SCLT1-209ENST00000511426 GEMIN7Q9H840 131 aaKnown RBP10.51□□□□□ -0.73
SCLT1-209ENST00000511426 H3BRM9 83 aa10.5□□□□□ -0.73
SCLT1-209ENST00000511426 TMEM223A0PJW6 202 aa10.5□□□□□ -0.73
SCLT1-209ENST00000511426 LINC00587B1AMM8 73 aa10.5□□□□□ -0.73
SCLT1-209ENST00000511426 TRAV8-6A0A0B4J262 113 aa10.49□□□□□ -0.73
SCLT1-209ENST00000511426 TMEM262E9PQX1 116 aa10.49□□□□□ -0.73
SCLT1-209ENST00000511426 RBX1P62877 108 aa10.49□□□□□ -0.73
SCLT1-209ENST00000511426 RNASE13Q5GAN3 156 aaKnown RBP10.49□□□□□ -0.73
SCLT1-209ENST00000511426 LYPD5Q6UWN5 251 aa10.49□□□□□ -0.73
SCLT1-209ENST00000511426 NOTCH1P46531 2555 aa10.49□□□□□ -0.73
SCLT1-209ENST00000511426 IGKV2D-26A0A0A0MRZ7 120 aa10.48□□□□□ -0.73
SCLT1-209ENST00000511426 IGLV4-60A0A075B6I1 120 aa10.47□□□□□ -0.73
SCLT1-209ENST00000511426 LINC00242Q5T6M2 205 aa10.47□□□□□ -0.73
SCLT1-209ENST00000511426 PLEKHB2Q96CS7 222 aa10.47□□□□□ -0.73
SCLT1-209ENST00000511426 NBEAL1Q6ZS30 2694 aa10.47□□□□□ -0.73
SCLT1-209ENST00000511426 LEPROTO15243 131 aa10.47□□□□□ -0.73
SCLT1-209ENST00000511426 MPV17L2Q567V2 206 aa10.47□□□□□ -0.73
SCLT1-209ENST00000511426 LINC00469Q8N7U9 141 aa10.47□□□□□ -0.73
SCLT1-209ENST00000511426 HIGD1BQ9P298 99 aa10.47□□□□□ -0.73
SCLT1-209ENST00000511426 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.74
SCLT1-209ENST00000511426 IGHV1-58A0A0C4DH39 117 aa10.45□□□□□ -0.74
SCLT1-209ENST00000511426 PCP2Q8IVA1 136 aa10.45□□□□□ -0.74
SCLT1-209ENST00000511426 MYMXA0A1B0GTQ4 84 aa10.44□□□□□ -0.74
SCLT1-209ENST00000511426 LBHQ53QV2 105 aaPredicted RBP10.44□□□□□ -0.74
SCLT1-209ENST00000511426 J3QQQ9 107 aa10.44□□□□□ -0.74
SCLT1-209ENST00000511426 LGALS3P17931 250 aaKnown RBP10.44□□□□□ -0.74
SCLT1-209ENST00000511426 SS18Q15532 418 aa10.44□□□□□ -0.74
SCLT1-209ENST00000511426 M0R143 59 aa10.43□□□□□ -0.74
SCLT1-209ENST00000511426 C2orf91Q6ZV80 131 aa10.43□□□□□ -0.74
SCLT1-209ENST00000511426 LINC01561Q8N1V8 128 aa10.43□□□□□ -0.74
SCLT1-209ENST00000511426 CDKN2A-AS1Q9UH64 79 aa10.43□□□□□ -0.74
SCLT1-209ENST00000511426 LINC00959A0A1B0GUT2 108 aa10.42□□□□□ -0.74
SCLT1-209ENST00000511426 CTAG1AP78358 180 aa10.42□□□□□ -0.74
SCLT1-209ENST00000511426 TCTAP57738 103 aa10.41□□□□□ -0.74
SCLT1-209ENST00000511426 IGLV5-39A0A0G2JS06 123 aa10.41□□□□□ -0.74
SCLT1-209ENST00000511426 ZNF815PA8K554 130 aa10.41□□□□□ -0.74
SCLT1-209ENST00000511426 ANGP03950 147 aaKnown RBP10.41□□□□□ -0.74
SCLT1-209ENST00000511426 IGHV3-30-3P0DP02 117 aa10.41□□□□□ -0.74
SCLT1-209ENST00000511426 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
SCLT1-209ENST00000511426 IGHV3OR16-9A0A0B4J2B5 98 aa10.4□□□□□ -0.74
SCLT1-209ENST00000511426 COX6A2Q02221 97 aa10.4□□□□□ -0.74
SCLT1-209ENST00000511426 REG3AQ06141 175 aa10.4□□□□□ -0.74
SCLT1-209ENST00000511426 HSD52Q0P140 79 aa10.4□□□□□ -0.74
SCLT1-209ENST00000511426 ESRGQ1W209 222 aa10.4□□□□□ -0.74
SCLT1-209ENST00000511426 TAL2Q16559 108 aa10.39□□□□□ -0.75
SCLT1-209ENST00000511426 LINC00269Q8N2A0 174 aa10.39□□□□□ -0.75
SCLT1-209ENST00000511426 A0A087WZ39 114 aa10.38□□□□□ -0.75
SCLT1-209ENST00000511426 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
SCLT1-209ENST00000511426 CCL18P55774 89 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms