RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 J3QQQ9 107 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 K7EP13 123 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 K7ERJ3 54 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 LEPROTO15243 131 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 CCL25O15444 150 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 UBE2D3P61077 147 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 UBE2D2P62837 147 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 RPL36AP83881 106 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 VAMP3Q15836 100 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 TMEM170BQ5T4T1 132 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 DAZ4Q86SG3 579 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 SBSPONQ8IVN8 264 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 LINC00612Q8N6U2 182 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 SPATA3Q8NHX4 192 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 PHLDA1Q8WV24 401 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 RPL36ALQ969Q0 106 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 PLEKHB2Q96CS7 222 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 VCX2Q9H322 139 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 DAZ3Q9NR90 486 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 SPANXB1Q9NS25 103 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 HIVEP1P15822 2718 aa3.39□□□□□ -1.87
PDLIM5-214ENST00000510099 TRGV2A0A075B6R0 118 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 IGLV5-45A0A087WSX0 123 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 A0A0J9YY99 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 TINCRA0A1B0GVN0 87 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 TRBV6-4A0A1B0GX49 114 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE12BA1L429 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE12JA6NER3 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 K7EP34 96 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE7O76087 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE12FP0CL80 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE12GP0CL81 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE12IP0CL82 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 LGALS3P17931 250 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 UBE2D1P51668 147 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 PTTG1IPP53801 180 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE4Q13068 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE5Q13069 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE13Q4V321 117 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 CEMP1Q6PRD7 247 aaPredicted RBP3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 SCGB1D4Q6XE38 83 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 SLC25A29Q8N8R3 303 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 HIST1H4GQ99525 98 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 X6R8D5 127 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 NOTCH3Q9UM47 2321 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 DNAH3Q8TD57 4116 aa3.38□□□□□ -1.87
PDLIM5-214ENST00000510099 F8P00451 2351 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 A0A1W2PPM0 123 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 SMIM9A6NGZ8 99 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 H3BUT2 72 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 SMIM13P0DJ93 91 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 SMAGPQ0VAQ4 97 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 FHL2Q14192 279 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 RNASE13Q5GAN3 156 aaKnown RBP3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 AMMECR1LQ6DCA0 310 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 NTM-AS1Q6ZSK4 140 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 C10orf126Q8N4M7 172 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 WFDC9Q8NEX5 89 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 KIR2DL5BQ8NHK3 375 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 GTSF1LQ9H1H1 148 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 NHP2Q9NX24 153 aaKnown RBP3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 CSDC2Q9Y534 153 aaKnown RBP3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 CMYA5Q8N3K9 4069 aa3.37□□□□□ -1.87
PDLIM5-214ENST00000510099 TRGV4A0A0C4DH28 118 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 IGHV1-58A0A0C4DH39 117 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 LOC100131303A0A0U1RQF7 123 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 TMEM238LA0A1B0GVL6 79 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 LYRM9A8MSI8 78 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 IGLL5B9A064 214 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 H7C423 109 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 IGHV3-30P01768 117 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 IGHV3-30-3P0DP02 117 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 IGHV3-30-5P0DP03 117 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 FABP2P12104 132 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 APOC4P55056 127 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 TIRAPP58753 221 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 C12orf74Q32Q52 190 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 GTF2H5Q6ZYL4 71 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 RAB37Q96AX2 223 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 VSIG2Q96IQ7 327 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 NAA38Q9BRA0 125 aaKnown RBP3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 TMEM243Q9BU79 118 aa3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 NIPBLQ6KC79 2804 aaeCLIP3.36□□□□□ -1.87
PDLIM5-214ENST00000510099 IGHV3-64A0A075B6Q5 118 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 TRAV8-3A0A0A6YYJ7 113 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 IGLV5-39A0A0G2JS06 123 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 A0A0J9YXY3 114 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 GAGE10A6NGK3 116 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 TMEM238C9JI98 176 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 SPINK8P0C7L1 97 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 HERVK_113P63121 156 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 SRSF9Q13242 221 aaKnown RBP eCLIP3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 LINC00242Q5T6M2 205 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 ZFAND6Q6FIF0 208 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 DGAT2L7PQ6IED9 249 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 LITAFQ99732 161 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms