RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 GTSF1LQ9H1H1 148 aa9.88□□□□□ -0.83
HMGCL-208ENST00000509389 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
HMGCL-208ENST00000509389 EREGO14944 169 aa9.88□□□□□ -0.83
HMGCL-208ENST00000509389 G0S2P27469 103 aa9.88□□□□□ -0.83
HMGCL-208ENST00000509389 Q8N976 141 aa9.88□□□□□ -0.83
HMGCL-208ENST00000509389 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
HMGCL-208ENST00000509389 CHCHD7Q9BUK0 85 aa9.88□□□□□ -0.83
HMGCL-208ENST00000509389 HSPB8Q9UJY1 196 aa9.88□□□□□ -0.83
HMGCL-208ENST00000509389 GAGE12JA6NER3 117 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 C3orf79P0CE67 100 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 SMIM6P0DI80 62 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 GAGE1Q13065 139 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 GAGE4Q13068 117 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 GAGE5Q13069 117 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 JOSD1Q15040 202 aaPredicted RBP9.87□□□□□ -0.83
HMGCL-208ENST00000509389 GAGE13Q4V321 117 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 PYY3Q5JQD4 70 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 C2orf66Q6UXQ4 117 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 NFE4Q86UQ8 179 aa9.87□□□□□ -0.83
HMGCL-208ENST00000509389 TRAV9-2A0A087WT02 112 aa9.86□□□□□ -0.83
HMGCL-208ENST00000509389 GYPEP15421 78 aa9.86□□□□□ -0.83
HMGCL-208ENST00000509389 COTL1Q14019 142 aa9.86□□□□□ -0.83
HMGCL-208ENST00000509389 WFDC10BQ8IUB3 73 aa9.86□□□□□ -0.83
HMGCL-208ENST00000509389 CYSLTR1Q9Y271 337 aa9.86□□□□□ -0.83
HMGCL-208ENST00000509389 IGIPA6NJ69 53 aa9.85□□□□□ -0.83
HMGCL-208ENST00000509389 NPSP0C0P6 89 aa9.85□□□□□ -0.83
HMGCL-208ENST00000509389 DNAH10OSP0CZ25 163 aa9.85□□□□□ -0.83
HMGCL-208ENST00000509389 AKR1D1P51857 326 aa9.85□□□□□ -0.83
HMGCL-208ENST00000509389 CDPF1Q6NVV7 123 aa9.85□□□□□ -0.83
HMGCL-208ENST00000509389 TIMM17AQ99595 171 aa9.85□□□□□ -0.83
HMGCL-208ENST00000509389 A0A087WTM6 91 aa9.84□□□□□ -0.83
HMGCL-208ENST00000509389 IGHV3-38A0A0C4DH36 116 aa9.84□□□□□ -0.83
HMGCL-208ENST00000509389 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
HMGCL-208ENST00000509389 ATP5LO75964 103 aa9.84□□□□□ -0.83
HMGCL-208ENST00000509389 TMEM97Q5BJF2 176 aa9.84□□□□□ -0.83
HMGCL-208ENST00000509389 ERASQ7Z444 233 aa9.84□□□□□ -0.83
HMGCL-208ENST00000509389 IFI27L1Q96BM0 104 aa9.84□□□□□ -0.83
HMGCL-208ENST00000509389 PYGO1Q9Y3Y4 419 aa9.84□□□□□ -0.83
HMGCL-208ENST00000509389 EPM2AB3EWF7 344 aa9.83□□□□□ -0.84
HMGCL-208ENST00000509389 XGP55808 180 aa9.83□□□□□ -0.84
HMGCL-208ENST00000509389 RPL39P62891 51 aaKnown RBP9.83□□□□□ -0.84
HMGCL-208ENST00000509389 TIMM21Q9BVV7 248 aa9.83□□□□□ -0.84
HMGCL-208ENST00000509389 K7EP13 123 aa9.82□□□□□ -0.84
HMGCL-208ENST00000509389 TIRAPP58753 221 aa9.82□□□□□ -0.84
HMGCL-208ENST00000509389 LINC01545Q5VT33 79 aa9.82□□□□□ -0.84
HMGCL-208ENST00000509389 PET117Q6UWS5 81 aa9.82□□□□□ -0.84
HMGCL-208ENST00000509389 SH2D6Q7Z4S9 175 aa9.82□□□□□ -0.84
HMGCL-208ENST00000509389 MRPL52Q86TS9 123 aaKnown RBP9.82□□□□□ -0.84
HMGCL-208ENST00000509389 FAM104AQ969W3 186 aa9.82□□□□□ -0.84
HMGCL-208ENST00000509389 MAP1LC3CQ9BXW4 147 aa9.82□□□□□ -0.84
HMGCL-208ENST00000509389 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
HMGCL-208ENST00000509389 H7C423 109 aa9.81□□□□□ -0.84
HMGCL-208ENST00000509389 KRTAP10-1P60331 282 aa9.81□□□□□ -0.84
HMGCL-208ENST00000509389 KRTDAPP60985 99 aa9.81□□□□□ -0.84
HMGCL-208ENST00000509389 ATP6V0E2Q8NHE4 81 aa9.81□□□□□ -0.84
HMGCL-208ENST00000509389 TMEM141Q96I45 108 aa9.81□□□□□ -0.84
HMGCL-208ENST00000509389 SPANXA1Q9NS26 97 aa9.81□□□□□ -0.84
HMGCL-208ENST00000509389 UBE2D4Q9Y2X8 147 aa9.81□□□□□ -0.84
HMGCL-208ENST00000509389 FAT1Q14517 4588 aa9.81□□□□□ -0.84
HMGCL-208ENST00000509389 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.8□□□□□ -0.84
HMGCL-208ENST00000509389 DEFB104AQ8WTQ1 72 aa9.8□□□□□ -0.84
HMGCL-208ENST00000509389 CSDC2Q9Y534 153 aaKnown RBP9.8□□□□□ -0.84
HMGCL-208ENST00000509389 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
HMGCL-208ENST00000509389 LINC00518Q8N0U6 118 aa9.79□□□□□ -0.84
HMGCL-208ENST00000509389 SCGB3A1Q96QR1 104 aa9.79□□□□□ -0.84
HMGCL-208ENST00000509389 IGLV4-3A0A075B6K6 122 aa9.78□□□□□ -0.84
HMGCL-208ENST00000509389 TRBV25-1A0A075B6N4 114 aa9.78□□□□□ -0.84
HMGCL-208ENST00000509389 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
HMGCL-208ENST00000509389 ODF1Q14990 250 aa9.78□□□□□ -0.84
HMGCL-208ENST00000509389 TEX43Q6ZNM6 134 aa9.78□□□□□ -0.84
HMGCL-208ENST00000509389 C10orf126Q8N4M7 172 aa9.78□□□□□ -0.84
HMGCL-208ENST00000509389 BAALCQ8WXS3 180 aa9.78□□□□□ -0.84
HMGCL-208ENST00000509389 TMEM243Q9BU79 118 aa9.78□□□□□ -0.84
HMGCL-208ENST00000509389 INAFM2P0DMQ5 153 aa9.77□□□□□ -0.84
HMGCL-208ENST00000509389 HERC1Q15751 4861 aa9.77□□□□□ -0.85
HMGCL-208ENST00000509389 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.76□□□□□ -0.85
HMGCL-208ENST00000509389 IGKV2-29A2NJV5 120 aaPredicted RBP9.76□□□□□ -0.85
HMGCL-208ENST00000509389 GCSHP23434 173 aa9.76□□□□□ -0.85
HMGCL-208ENST00000509389 AMELXQ99217 191 aa9.76□□□□□ -0.85
HMGCL-208ENST00000509389 DMBT1Q9UGM3 2413 aaPredicted RBP9.76□□□□□ -0.85
HMGCL-208ENST00000509389 A0A087WX48 190 aa9.75□□□□□ -0.85
HMGCL-208ENST00000509389 ZNF25P17030 456 aaPredicted RBP9.75□□□□□ -0.85
HMGCL-208ENST00000509389 Q5VSD8 79 aa9.75□□□□□ -0.85
HMGCL-208ENST00000509389 C20orf202A1L168 122 aa9.75□□□□□ -0.85
HMGCL-208ENST00000509389 FGF6P10767 208 aa9.75□□□□□ -0.85
HMGCL-208ENST00000509389 SMAGPQ0VAQ4 97 aa9.75□□□□□ -0.85
HMGCL-208ENST00000509389 LINC01556Q5JQF7 62 aa9.75□□□□□ -0.85
HMGCL-208ENST00000509389 LELP1Q5T871 98 aa9.75□□□□□ -0.85
HMGCL-208ENST00000509389 Q6ZN92 141 aa9.75□□□□□ -0.85
HMGCL-208ENST00000509389 C12orf57Q99622 126 aa9.75□□□□□ -0.85
HMGCL-208ENST00000509389 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
HMGCL-208ENST00000509389 F8VRH5 84 aa9.74□□□□□ -0.85
HMGCL-208ENST00000509389 PSCAO43653 123 aa9.74□□□□□ -0.85
HMGCL-208ENST00000509389 SCGB1D1O95968 90 aa9.74□□□□□ -0.85
HMGCL-208ENST00000509389 PMVKQ15126 192 aa9.74□□□□□ -0.85
HMGCL-208ENST00000509389 PAPPA-AS1Q5QFB9 102 aa9.74□□□□□ -0.85
HMGCL-208ENST00000509389 Q6ZUT4 128 aa9.74□□□□□ -0.85
HMGCL-208ENST00000509389 TRAV8-6A0A0B4J262 113 aa9.73□□□□□ -0.85
HMGCL-208ENST00000509389 A0A1B0GUV1 79 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms