RNA–Protein interactions for RNA: ENST00000508899.1

FREM3-202, Transcript of FRAS1 related extracellular matrix 3, humanhuman

TSL 5

Gene FREM3, Length 405 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3-202ENST00000508899 ICOSQ9Y6W8 199 aa4.23□□□□□ -1.73
FREM3-202ENST00000508899 CREBBPQ92793 2442 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 IGHV3OR16-12A0A075B7B8 117 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 TRAV8-3A0A0A6YYJ7 113 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 C9JAW5 83 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 IGKV3-20P01619 116 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 LINC00694P0DN24 101 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 PROK1P58294 105 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 HERVK_113P63121 156 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 ADAMTSL4-AS1Q5T5F5 129 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 ZNF625Q96I27 306 aaPredicted RBP4.22□□□□□ -1.73
FREM3-202ENST00000508899 RAX2Q96IS3 184 aa4.22□□□□□ -1.73
FREM3-202ENST00000508899 ASH1LQ9NR48 2969 aaKnown RBP4.22□□□□□ -1.73
FREM3-202ENST00000508899 ZFHX3Q15911 3703 aa4.21□□□□□ -1.73
FREM3-202ENST00000508899 IGSF10Q6WRI0 2623 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 TRAV4A0A0B4J268 109 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 SMIM1B2RUZ4 78 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 F5H768 121 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 H7C423 109 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 TGFAP01135 160 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 SPINK8P0C7L1 97 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 LINC00242Q5T6M2 205 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 FAM222AQ5U5X8 452 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 C18orf65Q6ZTR6 163 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 TEX29Q8N6K0 151 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.21□□□□□ -1.74
FREM3-202ENST00000508899 KRTAP4-5Q9BYR2 181 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 Q9UF83 564 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 SPG11Q96JI7 2443 aa4.21□□□□□ -1.74
FREM3-202ENST00000508899 UBR5O95071 2799 aaPredicted RBP4.2□□□□□ -1.74
FREM3-202ENST00000508899 AKAP9Q99996 3911 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 CELSR1Q9NYQ6 3014 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 SORL1Q92673 2214 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 IGHV3-64A0A075B6Q5 118 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.2□□□□□ -1.74
FREM3-202ENST00000508899 PLAC8L1A1L4L8 177 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 IGKV2-29A2NJV5 120 aaPredicted RBP4.2□□□□□ -1.74
FREM3-202ENST00000508899 K7EQD1 137 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 SCGB1C2P0DMR2 95 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 CKS1BP61024 79 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 DAZ2Q13117 558 aaKnown RBP4.2□□□□□ -1.74
FREM3-202ENST00000508899 DEFB136Q30KP8 78 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 CEMP1Q6PRD7 247 aaPredicted RBP4.2□□□□□ -1.74
FREM3-202ENST00000508899 SFTA2Q6UW10 78 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 SDIM1Q6ZPB5 146 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 DAZ4Q86SG3 579 aaKnown RBP4.2□□□□□ -1.74
FREM3-202ENST00000508899 C1orf158Q8N1D5 194 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 DEFB104AQ8WTQ1 72 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 NTN5Q8WTR8 489 aaPredicted RBP4.2□□□□□ -1.74
FREM3-202ENST00000508899 COPS9Q8WXC6 57 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 NRGNQ92686 78 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 UBE2WQ96B02 151 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 TMEM101Q96IK0 257 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 DAZ3Q9NR90 486 aaKnown RBP4.2□□□□□ -1.74
FREM3-202ENST00000508899 CDKN2A-AS1Q9UH64 79 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 FLNCQ14315 2725 aa4.2□□□□□ -1.74
FREM3-202ENST00000508899 TRBV7-7A0A0K0K1E9 115 aa4.19□□□□□ -1.74
FREM3-202ENST00000508899 COX7A2LO14548 114 aa4.19□□□□□ -1.74
FREM3-202ENST00000508899 TRACP01848 142 aa4.19□□□□□ -1.74
FREM3-202ENST00000508899 HERV-K104P63124 156 aa4.19□□□□□ -1.74
FREM3-202ENST00000508899 DEFB113Q30KQ7 82 aa4.19□□□□□ -1.74
FREM3-202ENST00000508899 NTM-AS1Q6ZSK4 140 aa4.19□□□□□ -1.74
FREM3-202ENST00000508899 Q6ZSV7 163 aa4.19□□□□□ -1.74
FREM3-202ENST00000508899 LINC00308Q8TCZ7 52 aa4.19□□□□□ -1.74
FREM3-202ENST00000508899 DYNLRB2Q8TF09 96 aa4.19□□□□□ -1.74
FREM3-202ENST00000508899 CITED2Q99967 270 aaPredicted RBP4.19□□□□□ -1.74
FREM3-202ENST00000508899 GEMIN7Q9H840 131 aaKnown RBP4.19□□□□□ -1.74
FREM3-202ENST00000508899 VPS13CQ709C8 3753 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 FBN2P35556 2912 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 USP9YO00507 2555 aaPredicted RBP4.18□□□□□ -1.74
FREM3-202ENST00000508899 SVEP1Q4LDE5 3571 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 IGHV3-73A0A0B4J1V6 119 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 GIG44P09565 113 aaPredicted RBP4.18□□□□□ -1.74
FREM3-202ENST00000508899 COX6CP09669 75 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 CMC4P56277 68 aaPredicted RBP4.18□□□□□ -1.74
FREM3-202ENST00000508899 Q1RN00 199 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 SOSTDC1Q6X4U4 206 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 LINC00612Q8N6U2 182 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 LINC01587Q99440 93 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 OVOL2Q9BRP0 275 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 CDC42SE2Q9NRR3 84 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 ACACBO00763 2458 aa4.18□□□□□ -1.74
FREM3-202ENST00000508899 USP24Q9UPU5 2620 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 TRAV8-4A0A0B4J246 113 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 TRBV6-4A0A1B0GX49 114 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 A8MZ25 164 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 NHLRC4P0CG21 123 aaPredicted RBP4.17□□□□□ -1.74
FREM3-202ENST00000508899 RPL36AP83881 106 aaKnown RBP4.17□□□□□ -1.74
FREM3-202ENST00000508899 COX6A2Q02221 97 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 RNASE13Q5GAN3 156 aaKnown RBP4.17□□□□□ -1.74
FREM3-202ENST00000508899 C2orf82Q6UX34 121 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 RPL36ALQ969Q0 106 aaKnown RBP4.17□□□□□ -1.74
FREM3-202ENST00000508899 C16orf74Q96GX8 76 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 KRTAP17-1Q9BYP8 105 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 C16orf95Q9H693 158 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 Q9H8V8 135 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 PTPN13Q12923 2485 aa4.17□□□□□ -1.74
FREM3-202ENST00000508899 ANK3Q12955 4377 aaKnown RBP4.16□□□□□ -1.74
FREM3-202ENST00000508899 TRAV26-1A0A087WT03 109 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms