RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 UBE2D1P51668 147 aa-0.22□□□□□ -2.44
GYPB-210ENST00000508841 WFDC6Q9BQY6 131 aa-0.22□□□□□ -2.44
GYPB-210ENST00000508841 REV3LO60673 3130 aa-0.22□□□□□ -2.44
GYPB-210ENST00000508841 CEP290O15078 2479 aa-0.22□□□□□ -2.44
GYPB-210ENST00000508841 PHLPP1O60346 1717 aa-0.22□□□□□ -2.44
GYPB-210ENST00000508841 UNC13AQ9UPW8 1703 aa-0.22□□□□□ -2.44
GYPB-210ENST00000508841 ZFHX3Q15911 3703 aa-0.22□□□□□ -2.45
GYPB-210ENST00000508841 CRYBG3Q68DQ2 2970 aa-0.22□□□□□ -2.45
GYPB-210ENST00000508841 URB1O60287 2271 aaKnown RBP-0.22□□□□□ -2.45
GYPB-210ENST00000508841 CFAP47Q6ZTR5 3102 aa-0.22□□□□□ -2.45
GYPB-210ENST00000508841 FREM2Q5SZK8 3169 aa-0.22□□□□□ -2.45
GYPB-210ENST00000508841 NBASA2RRP1 2371 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 PKHD1L1Q86WI1 4243 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 FRYLO94915 3013 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 MGAQ8IWI9 3026 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 DNAH9Q9NYC9 4486 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 K7ERU9 68 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 IFITM1P13164 125 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 DNAH8Q96JB1 4490 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 PKHD1P08F94 4074 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 FRYQ5TBA9 3013 aa-0.23□□□□□ -2.45
GYPB-210ENST00000508841 SVEP1Q4LDE5 3571 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 VPS13DQ5THJ4 4388 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 DNAH11Q96DT5 4516 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 PIN1P1O15428 100 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 IL5P05113 134 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 KRTAP6-2Q3LI66 62 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 Q5VV11 94 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 ZNF818PQ6ZRF7 136 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 KRTAP8-1Q8IUC2 63 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 C10orf82Q8WW14 230 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 COPZ2Q9P299 210 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 ADGRG4Q8IZF6 3080 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 DNAH3Q8TD57 4116 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 PTPRQQ9UMZ3 2332 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 WDFY3Q8IZQ1 3526 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 ITPR2Q14571 2701 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 LRBAP50851 2863 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 CMYA5Q8N3K9 4069 aa-0.24□□□□□ -2.45
GYPB-210ENST00000508841 LOC400499M0QZD8 3231 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 RANBP2P49792 3224 aaKnown RBP-0.25□□□□□ -2.45
GYPB-210ENST00000508841 PI4KAP42356 2102 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 PIEZO2Q9H5I5 2752 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 VPS13CQ709C8 3753 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 C10orf142B7Z368 130 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 APOC4-APOC2K7ER74 178 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 PITX3O75364 302 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 SMIM6P0DI80 62 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 UBE2G1P62253 170 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 FHAD1B1AJZ9 1412 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 CEP152O94986 1710 aa-0.25□□□□□ -2.45
GYPB-210ENST00000508841 SPTAN1Q13813 2472 aaKnown RBP-0.25□□□□□ -2.45
GYPB-210ENST00000508841 DNAH17Q9UFH2 4485 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.26□□□□□ -2.45
GYPB-210ENST00000508841 CFAP54Q96N23 3096 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 PDE4DIPQ5VU43 2346 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 TET3O43151 1660 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 DNAH10Q8IVF4 4471 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 GOLGA3Q08378 1498 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 TRBV10-3A0A0K0K1G6 114 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 M0R2T5 61 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 CBLN1P23435 193 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 GUCA1AP43080 201 aaPredicted RBP-0.26□□□□□ -2.45
GYPB-210ENST00000508841 SPTSSAQ969W0 71 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 USP34Q70CQ2 3546 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 BRCA2P51587 3418 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 DNAH6Q9C0G6 4158 aa-0.26□□□□□ -2.45
GYPB-210ENST00000508841 TRIOO75962 3097 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 CHD7Q9P2D1 2997 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 SMARCA2P51531 1590 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 SPENQ96T58 3664 aaKnown RBP-0.27□□□□□ -2.45
GYPB-210ENST00000508841 A0A0D9SFI3 127 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 NPFFO15130 113 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 MT1BP07438 61 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.27□□□□□ -2.45
GYPB-210ENST00000508841 ASPMQ8IZT6 3477 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 DNAH2Q9P225 4427 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 SPTBN1Q01082 2364 aaKnown RBP-0.27□□□□□ -2.45
GYPB-210ENST00000508841 LRRC37A3O60309 1634 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 DCHS2Q6V1P9 2916 aa-0.27□□□□□ -2.45
GYPB-210ENST00000508841 SLIT1O75093 1534 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 CEP350Q5VT06 3117 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 MUC3AQ02505 3323 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 LCE6AA0A183 80 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 ZNF815PA8K554 130 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 NDUFB6O95139 128 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 SPINK8P0C7L1 97 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 SSBP3-AS1Q7Z2R9 100 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 CYP4F30PQ9H0H9 118 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 DNAJC13O75165 2243 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 DNAH14Q0VDD8 3507 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 DMXL1Q9Y485 3027 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 ERCC6L2Q5T890 1561 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 SETBP1Q9Y6X0 1596 aa-0.28□□□□□ -2.45
GYPB-210ENST00000508841 PLCE1Q9P212 2302 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 HTTP42858 3142 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 PKDREJQ9NTG1 2253 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 DOPEY2Q9Y3R5 2298 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 ATMQ13315 3056 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 COL4A6Q14031 1691 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms