RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SFTA2Q6UW10 78 aa0.98□□□□□ -2.25
TRAPPC13-209ENST00000508304 FAM167A-AS1Q96KT0 104 aa0.98□□□□□ -2.25
TRAPPC13-209ENST00000508304 AMELXQ99217 191 aa0.98□□□□□ -2.25
TRAPPC13-209ENST00000508304 ARL2-SNX15V9GYD0 113 aa0.98□□□□□ -2.25
TRAPPC13-209ENST00000508304 SSC5DA1L4H1 1573 aa0.98□□□□□ -2.25
TRAPPC13-209ENST00000508304 MRC2Q9UBG0 1479 aa0.98□□□□□ -2.25
TRAPPC13-209ENST00000508304 SPHKAPQ2M3C7 1700 aa0.98□□□□□ -2.25
TRAPPC13-209ENST00000508304 CC2D2AQ9P2K1 1620 aa0.97□□□□□ -2.25
TRAPPC13-209ENST00000508304 SEC11AP67812 179 aa0.97□□□□□ -2.25
TRAPPC13-209ENST00000508304 NCMAPQ5T1S8 102 aa0.97□□□□□ -2.25
TRAPPC13-209ENST00000508304 PSME4Q14997 1843 aa0.96□□□□□ -2.26
TRAPPC13-209ENST00000508304 hADV29S1A0JD25 119 aa0.96□□□□□ -2.26
TRAPPC13-209ENST00000508304 G3V318 75 aa0.96□□□□□ -2.26
TRAPPC13-209ENST00000508304 MGPP08493 103 aa0.96□□□□□ -2.26
TRAPPC13-209ENST00000508304 NXT2Q9NPJ8 142 aaKnown RBP0.96□□□□□ -2.26
TRAPPC13-209ENST00000508304 LINC01558Q9Y6Z2 57 aa0.96□□□□□ -2.26
TRAPPC13-209ENST00000508304 KDM5AP29375 1690 aaKnown RBP0.95□□□□□ -2.26
TRAPPC13-209ENST00000508304 TRAV22A0A0B4J277 110 aa0.95□□□□□ -2.26
TRAPPC13-209ENST00000508304 PMCHL2Q9BQD1 86 aa0.95□□□□□ -2.26
TRAPPC13-209ENST00000508304 SHROOM2Q13796 1616 aa0.94□□□□□ -2.26
TRAPPC13-209ENST00000508304 ZNF815PA8K554 130 aa0.94□□□□□ -2.26
TRAPPC13-209ENST00000508304 UBE2D3P61077 147 aa0.94□□□□□ -2.26
TRAPPC13-209ENST00000508304 UBE2D2P62837 147 aa0.94□□□□□ -2.26
TRAPPC13-209ENST00000508304 UBA52P62987 128 aaKnown RBP0.94□□□□□ -2.26
TRAPPC13-209ENST00000508304 FAM223AQ8IWN6 122 aa0.94□□□□□ -2.26
TRAPPC13-209ENST00000508304 DPY30Q9C005 99 aa0.94□□□□□ -2.26
TRAPPC13-209ENST00000508304 CDC42SE2Q9NRR3 84 aa0.94□□□□□ -2.26
TRAPPC13-209ENST00000508304 UNC13BO14795 1591 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 M0R3E3 92 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 NDUFC1O43677 76 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 PKIAP61925 76 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 COL5A1-AS1Q5SY13 56 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 SSBP3-AS1Q7Z2R9 100 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 VAMP8Q9BV40 100 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 PLAC8Q9NZF1 115 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 KIF21AQ7Z4S6 1674 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 CCNB3Q8WWL7 1395 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 TOP2BQ02880 1626 aa0.93□□□□□ -2.26
TRAPPC13-209ENST00000508304 FYCO1Q9BQS8 1478 aa0.92□□□□□ -2.26
TRAPPC13-209ENST00000508304 VPS8Q8N3P4 1428 aa0.92□□□□□ -2.26
TRAPPC13-209ENST00000508304 A0A0D9SFI3 127 aa0.92□□□□□ -2.26
TRAPPC13-209ENST00000508304 A0A1B0GWA3 101 aa0.92□□□□□ -2.26
TRAPPC13-209ENST00000508304 IGLC1P0CG04 106 aa0.92□□□□□ -2.26
TRAPPC13-209ENST00000508304 Q6JHZ5 121 aa0.92□□□□□ -2.26
TRAPPC13-209ENST00000508304 TET3O43151 1660 aa0.91□□□□□ -2.26
TRAPPC13-209ENST00000508304 ABCC5O15440 1437 aa0.91□□□□□ -2.26
TRAPPC13-209ENST00000508304 ATOX1O00244 68 aa0.91□□□□□ -2.26
TRAPPC13-209ENST00000508304 MPC2O95563 127 aa0.91□□□□□ -2.26
TRAPPC13-209ENST00000508304 MT-ATP8P03928 68 aa0.91□□□□□ -2.26
TRAPPC13-209ENST00000508304 LRRC37A2A6NM11 1700 aa0.91□□□□□ -2.26
TRAPPC13-209ENST00000508304 SHANK2Q9UPX8 1470 aa0.91□□□□□ -2.26
TRAPPC13-209ENST00000508304 MYOM1P52179 1685 aa0.91□□□□□ -2.26
TRAPPC13-209ENST00000508304 ASXL3Q9C0F0 2248 aa0.91□□□□□ -2.26
TRAPPC13-209ENST00000508304 EHBP1L1Q8N3D4 1523 aa0.9□□□□□ -2.26
TRAPPC13-209ENST00000508304 ABCA3Q99758 1704 aa0.9□□□□□ -2.27
TRAPPC13-209ENST00000508304 SAA2P0DJI9 122 aaPredicted RBP0.9□□□□□ -2.27
TRAPPC13-209ENST00000508304 FDCSPQ8NFU4 85 aa0.9□□□□□ -2.27
TRAPPC13-209ENST00000508304 TOPAZ1Q8N9V7 1692 aa0.9□□□□□ -2.27
TRAPPC13-209ENST00000508304 ZNF236Q9UL36 1845 aa0.89□□□□□ -2.27
TRAPPC13-209ENST00000508304 CACNA1HO95180 2353 aa0.89□□□□□ -2.27
TRAPPC13-209ENST00000508304 ERCC6L2Q5T890 1561 aa0.89□□□□□ -2.27
TRAPPC13-209ENST00000508304 A0A0G2JND7 137 aa0.89□□□□□ -2.27
TRAPPC13-209ENST00000508304 FAM223BA6NKX1 122 aa0.89□□□□□ -2.27
TRAPPC13-209ENST00000508304 Q9H521 79 aa0.89□□□□□ -2.27
TRAPPC13-209ENST00000508304 SPCS1Q9Y6A9 102 aa0.89□□□□□ -2.27
TRAPPC13-209ENST00000508304 FBN2P35556 2912 aa0.88□□□□□ -2.27
TRAPPC13-209ENST00000508304 GAPVD1Q14C86 1478 aa0.88□□□□□ -2.27
TRAPPC13-209ENST00000508304 SBF2Q86WG5 1849 aa0.88□□□□□ -2.27
TRAPPC13-209ENST00000508304 PMCHL1Q16048 86 aa0.88□□□□□ -2.27
TRAPPC13-209ENST00000508304 PRO1933Q9H354 126 aa0.88□□□□□ -2.27
TRAPPC13-209ENST00000508304 NOTCH1P46531 2555 aa0.88□□□□□ -2.27
TRAPPC13-209ENST00000508304 ABCC10Q5T3U5 1492 aa0.87□□□□□ -2.27
TRAPPC13-209ENST00000508304 TEX14Q8IWB6 1497 aa0.87□□□□□ -2.27
TRAPPC13-209ENST00000508304 TENM3Q9P273 2699 aa0.87□□□□□ -2.27
TRAPPC13-209ENST00000508304 UQCRHP07919 91 aa0.87□□□□□ -2.27
TRAPPC13-209ENST00000508304 FAUP35544 74 aaKnown RBP0.87□□□□□ -2.27
TRAPPC13-209ENST00000508304 CACFD1Q9UGQ2 172 aa0.87□□□□□ -2.27
TRAPPC13-209ENST00000508304 PRO0255Q9UI72 69 aa0.87□□□□□ -2.27
TRAPPC13-209ENST00000508304 ANKRD36BQ8N2N9 1353 aa0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 KCPQ6ZWJ8 1503 aa0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 UQCRHLA0A096LP55 91 aa0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 PSMG4Q5JS54 123 aa0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 SPINK6Q6UWN8 80 aa0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 TMEM263Q8WUH6 116 aaKnown RBP0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 CNFNQ9BYD5 112 aa0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 DIP2CQ9Y2E4 1556 aa0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 AHCTF1Q8WYP5 2266 aa0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 TTC28Q96AY4 2481 aa0.86□□□□□ -2.27
TRAPPC13-209ENST00000508304 HMGXB3Q12766 1538 aa0.85□□□□□ -2.27
TRAPPC13-209ENST00000508304 WNK3Q9BYP7 1800 aa0.85□□□□□ -2.27
TRAPPC13-209ENST00000508304 SERP2Q8N6R1 65 aa0.85□□□□□ -2.27
TRAPPC13-209ENST00000508304 TRGV9Q99603 122 aa0.85□□□□□ -2.27
TRAPPC13-209ENST00000508304 NSD3Q9BZ95 1437 aa0.85□□□□□ -2.27
TRAPPC13-209ENST00000508304 LINC00472Q9H8W2 130 aa0.85□□□□□ -2.27
TRAPPC13-209ENST00000508304 RAPGEF6Q8TEU7 1601 aa0.85□□□□□ -2.27
TRAPPC13-209ENST00000508304 MLH3Q9UHC1 1453 aa0.85□□□□□ -2.27
TRAPPC13-209ENST00000508304 CHD1O14646 1710 aa0.84□□□□□ -2.27
TRAPPC13-209ENST00000508304 ARHGEF5Q12774 1597 aa0.84□□□□□ -2.27
TRAPPC13-209ENST00000508304 TRBV6-1A0A0K0K1D8 114 aa0.84□□□□□ -2.27
TRAPPC13-209ENST00000508304 SNHG12Q9BXW3 62 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms