RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 C14orf144Q96I85 54 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 FAM167A-AS1Q96KT0 104 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 TNCP24821 2201 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 CHD1O14646 1710 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 EHBP1L1Q8N3D4 1523 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 MDN1Q9NU22 5596 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 PLXNB2O15031 1838 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 WNK3Q9BYP7 1800 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 SHANK2Q9UPX8 1470 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 RAPGEF6Q8TEU7 1601 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 BIVM-ERCC5R4GMW8 1640 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 TTC28Q96AY4 2481 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 AHNAKQ09666 5890 aaKnown RBP0.18□□□□□ -2.38
SMN2-208ENST00000508258 TRAV22A0A0B4J277 110 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 H3BQ15 152 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 CHKB-CPT1BH3BT56 60 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 UBE2D3P61077 147 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 GNG11P61952 73 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 UBE2D2P62837 147 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 GTF2H5Q6ZYL4 71 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 CNFNQ9BYD5 112 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 NPVFQ9HCQ7 196 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 DOCK11Q5JSL3 2073 aa0.18□□□□□ -2.38
SMN2-208ENST00000508258 KDM5AP29375 1690 aaKnown RBP0.18□□□□□ -2.38
SMN2-208ENST00000508258 SBF2Q86WG5 1849 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 MRC2Q9UBG0 1479 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 A0A0D9SFI3 127 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 BDP1A6H8Y1 2624 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 NAP1L6A6NFF2 107 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 TMEM262E9PQX1 116 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 SFT2D2O95562 160 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 APOC3P02656 99 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 ANK2Q01484 3957 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 Q0VG73 95 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 Q5BKY6 102 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 TMEM170BQ5T4T1 132 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 SYNE1Q8NF91 8797 aaKnown RBP0.17□□□□□ -2.38
SMN2-208ENST00000508258 SPRR4Q96PI1 79 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 C12orf57Q99622 126 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 TCEAL7Q9BRU2 100 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 MUC5BQ9HC84 5762 aaPredicted RBP0.17□□□□□ -2.38
SMN2-208ENST00000508258 UQCR10Q9UDW1 63 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 SCN7AQ01118 1682 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 CACNA1HO95180 2353 aa0.17□□□□□ -2.38
SMN2-208ENST00000508258 TOP2BQ02880 1626 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 ABCA3Q99758 1704 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 ABCC5O15440 1437 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 NSD3Q9BZ95 1437 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 BCE1O60756 84 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 HAMPP81172 84 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 Q6JHZ5 121 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 NXT2Q9NPJ8 142 aaKnown RBP0.16□□□□□ -2.38
SMN2-208ENST00000508258 PRO0255Q9UI72 69 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 COL4A6Q14031 1691 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 PI4KAP42356 2102 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 MUC5ACP98088 5654 aa0.16□□□□□ -2.38
SMN2-208ENST00000508258 ERCC6L2Q5T890 1561 aa0.15□□□□□ -2.38
SMN2-208ENST00000508258 TCHHQ07283 1943 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 TMEM218A2RU14 115 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 C10orf142B7Z368 130 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 ATP6V1G2-DDX39BF2Z307 99 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 I3L2K1 104 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 IGLC1P0CG04 106 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 SNCAP37840 140 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 FAM223AQ8IWN6 122 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 MANBALQ9NQG1 85 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 PRO1854Q9UHT4 67 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 ARL2-SNX15V9GYD0 113 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 ZFHX3Q15911 3703 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 ADGRL2O95490 1459 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.39
SMN2-208ENST00000508258 CELSR2Q9HCU4 2923 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 POLQO75417 2590 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 CADP27708 2225 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 USP24Q9UPU5 2620 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 TRAV30A0A087WSZ9 112 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 hADV29S1A0JD25 119 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 MGPP08493 103 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 COX6CP09669 75 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 RBP2P50120 134 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 SPCS1Q9Y6A9 102 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 BTAF1O14981 1849 aa0.14□□□□□ -2.39
SMN2-208ENST00000508258 LRP1Q07954 4544 aaKnown RBP0.14□□□□□ -2.39
SMN2-208ENST00000508258 CNTLNQ9NXG0 1405 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 PRDM15P57071 1507 aaPredicted RBP0.13□□□□□ -2.39
SMN2-208ENST00000508258 PAPPAQ13219 1627 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 NHSL1Q5SYE7 1610 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 CRYM-AS1A6NIL9 109 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 FAM223BA6NKX1 122 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 SPINK1P00995 79 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 KRTDAPP60985 99 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 TMEM263Q8WUH6 116 aaKnown RBP0.13□□□□□ -2.39
SMN2-208ENST00000508258 TP53AIP1Q9HCN2 124 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 FAIMQ9NVQ4 179 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 MAGI1Q96QZ7 1491 aaPredicted RBP0.13□□□□□ -2.39
SMN2-208ENST00000508258 ABCA12Q86UK0 2595 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 NUP188Q5SRE5 1749 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 TULP4Q9NRJ4 1543 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 ARHGEF12Q9NZN5 1544 aa0.13□□□□□ -2.39
SMN2-208ENST00000508258 VPS8Q8N3P4 1428 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms