RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 LSM2Q9Y333 95 aaKnown RBP-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 LINC00312Q9Y6C7 94 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 R4GMQ9 66 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 PDCD11Q14690 1871 aaKnown RBP-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 KIAA1551Q9HCM1 1747 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 SLIT1O75093 1534 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 POLA1P09884 1462 aaPredicted RBP-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 DAPK1P53355 1430 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 TRBV7-4A0A0J9YYF1 115 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 LINC00959A0A1B0GUT2 108 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 PPP1R17O96001 155 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 SERPINB1P30740 379 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 CCL8P80075 99 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 COX17Q14061 63 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 CLLU1Q5K131 121 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 TMEM170BQ5T4T1 132 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 SPANXN1Q5VSR9 72 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 Q6AWC8 147 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 MNS1Q8NEH6 495 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 VSTM2AQ8TAG5 236 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 CFAP53Q96M91 514 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 BOLA2Q9H3K6 86 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 PARVGQ9HBI0 331 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 FRYQ5TBA9 3013 aa-1.03□□□□□ -2.57
CLOCK-207ENST00000508049 A0A0G2JMZ2 1700 aa-1.03□□□□□ -2.58
CLOCK-207ENST00000508049 CELSR3Q9NYQ7 3312 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 PKD1L2Q7Z442 2459 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 OVOS2A0A0G2JMS6 1433 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 MYOM3Q5VTT5 1437 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 NBEAL2Q6ZNJ1 2754 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 CTXND1A0A1B0GTU2 59 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 SMIM24O75264 130 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 IFNGP01579 166 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 COX8AP10176 69 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 PIPP12273 146 aaPredicted RBP-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 UBE2G1P62253 170 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 OR9Q1Q8NGQ5 310 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 BANF2Q9H503 90 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 NAA60Q9H7X0 242 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 MYOM1P52179 1685 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 SYNJ1O43426 1573 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 SETBP1Q9Y6X0 1596 aa-1.04□□□□□ -2.58
CLOCK-207ENST00000508049 SHANK2Q9UPX8 1470 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 RANBP2P49792 3224 aaKnown RBP-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 ARHGEF10O15013 1369 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 NUP188Q5SRE5 1749 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 XRN1Q8IZH2 1706 aaKnown RBP-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 TRBV20-1A0A075B6N2 111 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 SPAARA0A1B0GVQ0 90 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 CPSF4LA6NMK7 179 aaKnown RBP-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 DPM2O94777 84 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 MT-ND4LP03901 98 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 PAEPP09466 180 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 CBLN1P23435 193 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 MRPS25P82663 173 aaKnown RBP-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 H1FX-AS1Q4G0G2 97 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 TMEM244Q5VVB8 128 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 PPP1R2P3Q6NXS1 205 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 HOPXQ9BPY8 73 aaPredicted RBP-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 CALML5Q9NZT1 146 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 MGAM2Q2M2H8 2515 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 FAM186AA6NE01 2351 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 ARHGEF5Q12774 1597 aa-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 MAGI1Q96QZ7 1491 aaPredicted RBP-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 USP9XQ93008 2570 aaPredicted RBP-1.05□□□□□ -2.58
CLOCK-207ENST00000508049 DSPP15924 2871 aaKnown RBP-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 ROCK1Q13464 1354 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 TMEM2Q9UHN6 1383 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 DNAH7Q8WXX0 4024 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 GCN1Q92616 2671 aaKnown RBP-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 CICQ96RK0 1608 aaPredicted RBP-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 A6NIN4 97 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 H3BNG1 76 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 SYS1-DBNDD2H3BUS1 97 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 UQCR11O14957 56 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 PFDN1O60925 122 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 SIX6O95475 246 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 SCTP09683 121 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 RPS28P62857 69 aaKnown RBP-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 DEFA5Q01523 94 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 MIC13Q5XKP0 118 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 TOMM20LQ6UXN7 152 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 OR8I2Q8N0Y5 310 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 SPTSSBQ8NFR3 76 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 USMG5Q96IX5 58 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 MRPL40Q9NQ50 206 aaKnown RBP-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 STOML2Q9UJZ1 356 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 LENEPQ9Y5L5 61 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 CCDC168Q8NDH2 2452 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 NKTRP30414 1462 aaKnown RBP-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 IFT140Q96RY7 1462 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 DISP2A7MBM2 1401 aa-1.06□□□□□ -2.58
CLOCK-207ENST00000508049 SPENQ96T58 3664 aaKnown RBP-1.07□□□□□ -2.58
CLOCK-207ENST00000508049 H0YGG7 62 aa-1.07□□□□□ -2.58
CLOCK-207ENST00000508049 TPPP2P59282 170 aa-1.07□□□□□ -2.58
CLOCK-207ENST00000508049 ALX1Q15699 326 aa-1.07□□□□□ -2.58
CLOCK-207ENST00000508049 RPL7L1Q6DKI1 246 aaKnown RBP-1.07□□□□□ -2.58
CLOCK-207ENST00000508049 BAGE2Q86Y30 109 aa-1.07□□□□□ -2.58
CLOCK-207ENST00000508049 MAGOHBQ96A72 148 aaKnown RBP-1.07□□□□□ -2.58
CLOCK-207ENST00000508049 ATPIF1Q9UII2 106 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms