RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 H0YIZ8 118 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 COX7A2LO14548 114 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 ESDP10768 282 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 GCHFRP30047 84 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 RPL28P46779 137 aaKnown RBP4.04□□□□□ -1.76
VCAN-207ENST00000507162 RASL11AQ6T310 242 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 Q86TA4 180 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 OR2D3Q8NGH3 330 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 TMEM101Q96IK0 257 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 BTF3L4Q96K17 158 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 C2orf48Q96LS8 159 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 UBE2D4Q9Y2X8 147 aa4.04□□□□□ -1.76
VCAN-207ENST00000507162 LINC00242Q5T6M2 205 aa4.03□□□□□ -1.76
VCAN-207ENST00000507162 AP1S3Q96PC3 154 aa4.03□□□□□ -1.76
VCAN-207ENST00000507162 MED28Q9H204 178 aa4.03□□□□□ -1.76
VCAN-207ENST00000507162 NIT2Q9NQR4 276 aa4.03□□□□□ -1.76
VCAN-207ENST00000507162 NEBP20929 6669 aa4.02□□□□□ -1.77
VCAN-207ENST00000507162 IGLV8-61A0A075B6I0 122 aa4.02□□□□□ -1.77
VCAN-207ENST00000507162 NUPR1O60356 82 aa4.02□□□□□ -1.77
VCAN-207ENST00000507162 CTAG1AP78358 180 aa4.02□□□□□ -1.77
VCAN-207ENST00000507162 SPAG11BQ08648 103 aa4.02□□□□□ -1.77
VCAN-207ENST00000507162 COX6B2Q6YFQ2 88 aa4.02□□□□□ -1.77
VCAN-207ENST00000507162 C5orf38Q86SI9 138 aa4.02□□□□□ -1.77
VCAN-207ENST00000507162 SMIM3Q9BZL3 60 aa4.02□□□□□ -1.77
VCAN-207ENST00000507162 RBM38Q9H0Z9 239 aaKnown RBP4.02□□□□□ -1.77
VCAN-207ENST00000507162 ZFP30Q9Y2G7 519 aa4.02□□□□□ -1.77
VCAN-207ENST00000507162 PEX7O00628 323 aa4.01□□□□□ -1.77
VCAN-207ENST00000507162 SNAI2O43623 268 aa4.01□□□□□ -1.77
VCAN-207ENST00000507162 STAG3L2P0CL84 134 aa4.01□□□□□ -1.77
VCAN-207ENST00000507162 STAG3L3P0CL85 134 aa4.01□□□□□ -1.77
VCAN-207ENST00000507162 NTF3P20783 257 aa4.01□□□□□ -1.77
VCAN-207ENST00000507162 CDC34P49427 236 aaPredicted RBP4.01□□□□□ -1.77
VCAN-207ENST00000507162 IL15RAQ13261 267 aa4.01□□□□□ -1.77
VCAN-207ENST00000507162 C10orf25Q5T742 122 aa4.01□□□□□ -1.77
VCAN-207ENST00000507162 Q6ZNX1 250 aa4.01□□□□□ -1.77
VCAN-207ENST00000507162 DEDD2Q8WXF8 326 aa4.01□□□□□ -1.77
VCAN-207ENST00000507162 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
VCAN-207ENST00000507162 NAP1L6A6NFF2 107 aa4□□□□□ -1.77
VCAN-207ENST00000507162 H7C423 109 aa4□□□□□ -1.77
VCAN-207ENST00000507162 APCSP02743 223 aa4□□□□□ -1.77
VCAN-207ENST00000507162 OR5AL1P0C617 328 aa4□□□□□ -1.77
VCAN-207ENST00000507162 UBE2G2P60604 165 aa4□□□□□ -1.77
VCAN-207ENST00000507162 UBE2G1P62253 170 aa4□□□□□ -1.77
VCAN-207ENST00000507162 FAM229BQ4G0N7 80 aa4□□□□□ -1.77
VCAN-207ENST00000507162 PCOTHQ58A44 107 aa4□□□□□ -1.77
VCAN-207ENST00000507162 UNQ6190/PRO20217Q6UXQ8 127 aa4□□□□□ -1.77
VCAN-207ENST00000507162 COX8CQ7Z4L0 72 aa4□□□□□ -1.77
VCAN-207ENST00000507162 DAND5Q8N907 189 aa4□□□□□ -1.77
VCAN-207ENST00000507162 SEC22CQ9BRL7 303 aa4□□□□□ -1.77
VCAN-207ENST00000507162 TPPP3Q9BW30 176 aa4□□□□□ -1.77
VCAN-207ENST00000507162 TMEM167BQ9NRX6 74 aa4□□□□□ -1.77
VCAN-207ENST00000507162 MRPL35Q9NZE8 188 aaKnown RBP4□□□□□ -1.77
VCAN-207ENST00000507162 ALG5Q9Y673 324 aa4□□□□□ -1.77
VCAN-207ENST00000507162 G3V3Q6 166 aa3.99□□□□□ -1.77
VCAN-207ENST00000507162 NDUFA1O15239 70 aa3.99□□□□□ -1.77
VCAN-207ENST00000507162 BCE1O60756 84 aa3.99□□□□□ -1.77
VCAN-207ENST00000507162 ZNF25P17030 456 aaPredicted RBP3.99□□□□□ -1.77
VCAN-207ENST00000507162 DEFA1P59665 94 aa3.99□□□□□ -1.77
VCAN-207ENST00000507162 TMEM241Q24JQ0 296 aa3.99□□□□□ -1.77
VCAN-207ENST00000507162 SPAG11AQ6PDA7 123 aa3.99□□□□□ -1.77
VCAN-207ENST00000507162 KIR2DL4Q99706 377 aa3.99□□□□□ -1.77
VCAN-207ENST00000507162 SMDT1Q9H4I9 107 aa3.99□□□□□ -1.77
VCAN-207ENST00000507162 C22orf24Q9Y442 160 aa3.99□□□□□ -1.77
VCAN-207ENST00000507162 A0A1W2PRE2 83 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 C1orf196B1AJZ1 125 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 CXorf1O96002 111 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 TLX1NBP0CAT3 122 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 LBHQ53QV2 105 aaPredicted RBP3.98□□□□□ -1.77
VCAN-207ENST00000507162 C3orf22Q8N5N4 141 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 ORAOV1Q8WV07 137 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 FMC1Q96HJ9 113 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 CDC42SE2Q9NRR3 84 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 C6orf48Q9UBA6 75 aa3.98□□□□□ -1.77
VCAN-207ENST00000507162 TRAV13-1A0A0B4J241 112 aa3.97□□□□□ -1.77
VCAN-207ENST00000507162 NCR2O95944 276 aa3.97□□□□□ -1.77
VCAN-207ENST00000507162 CXCL1P09341 107 aa3.97□□□□□ -1.77
VCAN-207ENST00000507162 UBE2AP49459 152 aa3.97□□□□□ -1.77
VCAN-207ENST00000507162 C9orf129Q5T035 196 aaKnown RBP3.97□□□□□ -1.77
VCAN-207ENST00000507162 OCC1Q8TAD7 63 aa3.97□□□□□ -1.77
VCAN-207ENST00000507162 HIST1H2BAQ96A08 127 aa3.97□□□□□ -1.77
VCAN-207ENST00000507162 CENPXA8MT69 81 aa3.96□□□□□ -1.78
VCAN-207ENST00000507162 SIX6O95475 246 aa3.96□□□□□ -1.78
VCAN-207ENST00000507162 LTAP01374 205 aa3.96□□□□□ -1.78
VCAN-207ENST00000507162 CFC1P0CG37 223 aa3.96□□□□□ -1.78
VCAN-207ENST00000507162 PMCHP20382 165 aa3.96□□□□□ -1.78
VCAN-207ENST00000507162 BLOC1S1P78537 153 aa3.96□□□□□ -1.78
VCAN-207ENST00000507162 RNASE13Q5GAN3 156 aaKnown RBP3.96□□□□□ -1.78
VCAN-207ENST00000507162 MARVELD1Q9BSK0 173 aa3.96□□□□□ -1.78
VCAN-207ENST00000507162 HSPB11Q9Y547 144 aa3.96□□□□□ -1.78
VCAN-207ENST00000507162 V9GYH0 126 aa3.96□□□□□ -1.78
VCAN-207ENST00000507162 RPL37AP8A6NKH3 93 aa3.95□□□□□ -1.78
VCAN-207ENST00000507162 F8WDY8 70 aa3.95□□□□□ -1.78
VCAN-207ENST00000507162 VPREB1P12018 145 aa3.95□□□□□ -1.78
VCAN-207ENST00000507162 BTCP35070 178 aa3.95□□□□□ -1.78
VCAN-207ENST00000507162 CTRLP40313 264 aa3.95□□□□□ -1.78
VCAN-207ENST00000507162 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
VCAN-207ENST00000507162 TRIQKQ629K1 86 aa3.95□□□□□ -1.78
VCAN-207ENST00000507162 LINC00469Q8N7U9 141 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms