RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 TMEM70Q9BUB7 260 aa2.92□□□□□ -1.94
HERC6-207ENST00000506842 PHLDA3Q9Y5J5 127 aa2.92□□□□□ -1.94
HERC6-207ENST00000506842 LRP1BQ9NZR2 4599 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 KANTRA0A1W2PQU2 76 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 GRIFINA4D1Z8 144 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 SMLR1H3BR10 107 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 H3BVH4 76 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 IGLV2-8P01709 118 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 IGHV3-30P01768 117 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 IGHV3-33P01772 117 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 IGHV3-30-3P0DP02 117 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 IGHV3-30-5P0DP03 117 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 TPT1P13693 172 aaKnown RBP2.91□□□□□ -1.94
HERC6-207ENST00000506842 CXCL5P42830 114 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 UBE2D3P61077 147 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 UBE2D2P62837 147 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 CCL20P78556 96 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 Q0VG73 95 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 EIF5AL1Q6IS14 154 aaKnown RBP2.91□□□□□ -1.94
HERC6-207ENST00000506842 Q6ZSA8 131 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 ZFP82Q8N141 532 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 Q8N976 141 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 ZNF471Q9BX82 626 aaPredicted RBP2.91□□□□□ -1.94
HERC6-207ENST00000506842 GEMIN7Q9H840 131 aaKnown RBP2.91□□□□□ -1.94
HERC6-207ENST00000506842 VAX2Q9UIW0 290 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 HSPG2P98160 4391 aa2.91□□□□□ -1.94
HERC6-207ENST00000506842 TRBV6-8A0A0A6YYG3 113 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 C19orf71A6NCJ1 209 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 F2Z2F3 143 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 M0R036 132 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 PSCAO43653 123 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 IGLC6P0CF74 106 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 FUSP35637 526 aaKnown RBP eCLIP2.9□□□□□ -1.95
HERC6-207ENST00000506842 AKR1C3P42330 323 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 RPL35P42766 123 aaKnown RBP2.9□□□□□ -1.95
HERC6-207ENST00000506842 SULT1A2P50226 295 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 ELOBQ15370 118 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 TMEM97Q5BJF2 176 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 DAZ4Q86SG3 579 aaKnown RBP2.9□□□□□ -1.95
HERC6-207ENST00000506842 TCTE3Q8IZS6 198 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 C9orf62Q8N4C0 152 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 FAM213BQ8TBF2 198 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 MANBALQ9NQG1 85 aa2.9□□□□□ -1.95
HERC6-207ENST00000506842 TEX46H3BTG2 121 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 M0QY20 66 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 M0R381 172 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 PDE6DO43924 150 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 PFDN1O60925 122 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 NDUFS6O75380 124 aaKnown RBP2.89□□□□□ -1.95
HERC6-207ENST00000506842 RYR1P21817 5038 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 RPS20P60866 119 aaKnown RBP2.89□□□□□ -1.95
HERC6-207ENST00000506842 PKIAP61925 76 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 WFDC2Q14508 124 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 FAM74A4Q5TZK3 123 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 ENHOQ6UWT2 76 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 TEX43Q6ZNM6 134 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 NTM-AS1Q6ZSK4 140 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 SLC51BQ86UW2 128 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 OR10AG1Q8NH19 301 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 LYPD6BQ8NI32 183 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 RMI2Q96E14 147 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 DNAJC30Q96LL9 226 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 BIN3Q9NQY0 253 aa2.89□□□□□ -1.95
HERC6-207ENST00000506842 PCLOQ9Y6V0 5065 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 FLG2Q5D862 2391 aaPredicted RBP2.88□□□□□ -1.95
HERC6-207ENST00000506842 TRBV20OR9-2A0A075B6H5 130 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 A0A087WX48 190 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 TMSB15BA0A087X1C1 80 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 INAFM2P0DMQ5 153 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 NTF3P20783 257 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 FOXA3P55318 350 aaPredicted RBP2.88□□□□□ -1.95
HERC6-207ENST00000506842 CACNG7P62955 275 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 RPL19P84098 196 aaKnown RBP2.88□□□□□ -1.95
HERC6-207ENST00000506842 MEF2BQ02080 365 aaPredicted RBP2.88□□□□□ -1.95
HERC6-207ENST00000506842 IQCJQ1A5X6 159 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 Q5VSD8 79 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 SPANXN1Q5VSR9 72 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.88□□□□□ -1.95
HERC6-207ENST00000506842 FRZBQ92765 325 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 DERL1Q9BUN8 251 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 CNFNQ9BYD5 112 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 KLK12Q9UKR0 248 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 URGCP-MRPS24S4R325 110 aa2.88□□□□□ -1.95
HERC6-207ENST00000506842 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.87□□□□□ -1.95
HERC6-207ENST00000506842 RAB19A4D1S5 217 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 RBFOX3A6NFN3 312 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 TMEM262E9PQX1 116 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 H7C1H1 209 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 SMR3BP02814 79 aaPredicted RBP2.87□□□□□ -1.95
HERC6-207ENST00000506842 GZMBP10144 247 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 MIAQ16674 131 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 FER1L6-AS1Q8NA97 138 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 OR2D3Q8NGH3 330 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 BAALCQ8WXS3 180 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 UBE2WQ96B02 151 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 FAM210AQ96ND0 272 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 NIT2Q9NQR4 276 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 MED9Q9NWA0 146 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms