RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 FAM104AQ969W3 186 aa8.57□□□□□ -1.04
TCOF1-210ENST00000506767 SPANXA1Q9NS26 97 aa8.57□□□□□ -1.04
TCOF1-210ENST00000506767 PYGO1Q9Y3Y4 419 aa8.57□□□□□ -1.04
TCOF1-210ENST00000506767 LINC00614P0C842 121 aa8.56□□□□□ -1.04
TCOF1-210ENST00000506767 C2orf66Q6UXQ4 117 aa8.56□□□□□ -1.04
TCOF1-210ENST00000506767 FA2HQ7L5A8 372 aa8.56□□□□□ -1.04
TCOF1-210ENST00000506767 ZNF664Q8N3J9 261 aa8.56□□□□□ -1.04
TCOF1-210ENST00000506767 FAT2Q9NYQ8 4349 aa8.56□□□□□ -1.04
TCOF1-210ENST00000506767 G0S2P27469 103 aa8.55□□□□□ -1.04
TCOF1-210ENST00000506767 TNP2Q05952 138 aa8.55□□□□□ -1.04
TCOF1-210ENST00000506767 DGAT2L7PQ6IED9 249 aa8.55□□□□□ -1.04
TCOF1-210ENST00000506767 KRTAP26-1Q6PEX3 210 aa8.55□□□□□ -1.04
TCOF1-210ENST00000506767 CLPSL2Q6UWE3 100 aa8.55□□□□□ -1.04
TCOF1-210ENST00000506767 RMI2Q96E14 147 aa8.55□□□□□ -1.04
TCOF1-210ENST00000506767 TM2D2Q9BX73 214 aa8.55□□□□□ -1.04
TCOF1-210ENST00000506767 CYSLTR1Q9Y271 337 aa8.55□□□□□ -1.04
TCOF1-210ENST00000506767 COX11Q9Y6N1 276 aa8.55□□□□□ -1.04
TCOF1-210ENST00000506767 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
TCOF1-210ENST00000506767 TRAV8-4A0A0B4J246 113 aa8.54□□□□□ -1.04
TCOF1-210ENST00000506767 PRSS29PA6NIE9 313 aa8.54□□□□□ -1.04
TCOF1-210ENST00000506767 RAB5BP61020 215 aa8.54□□□□□ -1.04
TCOF1-210ENST00000506767 MRPS36P82909 103 aaKnown RBP8.54□□□□□ -1.04
TCOF1-210ENST00000506767 MAPKAPK5-AS1Q8N8E1 139 aa8.54□□□□□ -1.04
TCOF1-210ENST00000506767 TOMM6Q96B49 74 aa8.54□□□□□ -1.04
TCOF1-210ENST00000506767 AP5S1Q9NUS5 200 aa8.54□□□□□ -1.04
TCOF1-210ENST00000506767 IGIPA6NJ69 53 aa8.53□□□□□ -1.04
TCOF1-210ENST00000506767 NPSP0C0P6 89 aa8.53□□□□□ -1.04
TCOF1-210ENST00000506767 Q6ZUT4 128 aa8.53□□□□□ -1.04
TCOF1-210ENST00000506767 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
TCOF1-210ENST00000506767 C1orf43Q9BWL3 253 aa8.53□□□□□ -1.04
TCOF1-210ENST00000506767 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
TCOF1-210ENST00000506767 A0A096LNJ9 63 aa8.52□□□□□ -1.05
TCOF1-210ENST00000506767 LINC00959A0A1B0GUT2 108 aa8.52□□□□□ -1.05
TCOF1-210ENST00000506767 LRCOL1A6NCL2 159 aa8.52□□□□□ -1.05
TCOF1-210ENST00000506767 LINC01549A6NIU2 74 aa8.52□□□□□ -1.05
TCOF1-210ENST00000506767 IGLV10-54A0A075B6I4 117 aa8.51□□□□□ -1.05
TCOF1-210ENST00000506767 IGKV3OR2-268A0A0C4DH90 116 aa8.51□□□□□ -1.05
TCOF1-210ENST00000506767 A0A1B0GVY2 172 aa8.51□□□□□ -1.05
TCOF1-210ENST00000506767 PSCAO43653 123 aa8.51□□□□□ -1.05
TCOF1-210ENST00000506767 RNASE13Q5GAN3 156 aaKnown RBP8.51□□□□□ -1.05
TCOF1-210ENST00000506767 CHCHD1Q96BP2 118 aaKnown RBP8.51□□□□□ -1.05
TCOF1-210ENST00000506767 TIMM17AQ99595 171 aa8.51□□□□□ -1.05
TCOF1-210ENST00000506767 A0A087WTM6 91 aa8.5□□□□□ -1.05
TCOF1-210ENST00000506767 CCL25O15444 150 aa8.5□□□□□ -1.05
TCOF1-210ENST00000506767 ERASQ7Z444 233 aa8.5□□□□□ -1.05
TCOF1-210ENST00000506767 TMEM141Q96I45 108 aa8.5□□□□□ -1.05
TCOF1-210ENST00000506767 AMELXQ99217 191 aa8.5□□□□□ -1.05
TCOF1-210ENST00000506767 HIST1H2BKO60814 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST1H2BJP06899 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST1H2BOP23527 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST1H2BBP33778 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST1H2BDP58876 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 LINC00310P59036 64 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST1H2BCP62807 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST2H2BEQ16778 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.49□□□□□ -1.05
TCOF1-210ENST00000506767 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 CHCHD10Q8WYQ3 142 aaPredicted RBP8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST1H2BHQ93079 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 SCGB3A1Q96QR1 104 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST1H2BNQ99877 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 HIST1H2BMQ99879 126 aa8.49□□□□□ -1.05
TCOF1-210ENST00000506767 PKD1P98161 4303 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 DNAH11Q96DT5 4516 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 C1orf196B1AJZ1 125 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 HBDP02042 147 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 WFDC2Q14508 124 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 SS18Q15532 418 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 PMCHL1Q16048 86 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 LINC00173Q6ZV60 143 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 BAALCQ8WXS3 180 aa8.48□□□□□ -1.05
TCOF1-210ENST00000506767 TRAV13-1A0A0B4J241 112 aa8.47□□□□□ -1.05
TCOF1-210ENST00000506767 GAGE12HA6NDE8 117 aa8.47□□□□□ -1.05
TCOF1-210ENST00000506767 SERF1AO75920 110 aa8.47□□□□□ -1.05
TCOF1-210ENST00000506767 FOXI1Q12951 378 aa8.47□□□□□ -1.05
TCOF1-210ENST00000506767 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
TCOF1-210ENST00000506767 TEX43Q6ZNM6 134 aa8.47□□□□□ -1.05
TCOF1-210ENST00000506767 VCX2Q9H322 139 aa8.47□□□□□ -1.05
TCOF1-210ENST00000506767 IFITM10A6NMD0 228 aa8.46□□□□□ -1.06
TCOF1-210ENST00000506767 NUPR1O60356 82 aa8.46□□□□□ -1.06
TCOF1-210ENST00000506767 ZC2HC1BQ5TFG8 222 aa8.46□□□□□ -1.06
TCOF1-210ENST00000506767 CD164L2Q6UWJ8 174 aa8.46□□□□□ -1.06
TCOF1-210ENST00000506767 Q6ZN92 141 aa8.46□□□□□ -1.06
TCOF1-210ENST00000506767 HSBP1O75506 76 aa8.45□□□□□ -1.06
TCOF1-210ENST00000506767 XCL1P47992 114 aa8.45□□□□□ -1.06
TCOF1-210ENST00000506767 UBE2D1P51668 147 aa8.45□□□□□ -1.06
TCOF1-210ENST00000506767 FAM19A3Q7Z5A8 133 aa8.45□□□□□ -1.06
TCOF1-210ENST00000506767 Q8N814 137 aa8.45□□□□□ -1.06
TCOF1-210ENST00000506767 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.44□□□□□ -1.06
TCOF1-210ENST00000506767 EREGO14944 169 aa8.44□□□□□ -1.06
TCOF1-210ENST00000506767 LECT2O14960 151 aa8.44□□□□□ -1.06
TCOF1-210ENST00000506767 LINC00242Q5T6M2 205 aa8.44□□□□□ -1.06
TCOF1-210ENST00000506767 FAM19A2Q8N3H0 131 aa8.44□□□□□ -1.06
TCOF1-210ENST00000506767 C2orf88Q9BSF0 95 aa8.44□□□□□ -1.06
TCOF1-210ENST00000506767 HECTD4Q9Y4D8 3996 aa8.44□□□□□ -1.06
TCOF1-210ENST00000506767 USP17L23D6RBM5 183 aa8.43□□□□□ -1.06
TCOF1-210ENST00000506767 ATP5LO75964 103 aa8.43□□□□□ -1.06
TCOF1-210ENST00000506767 KRTAP10-2P60368 255 aa8.43□□□□□ -1.06
TCOF1-210ENST00000506767 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms