RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 CHTOPQ9Y3Y2 248 aaKnown RBP12.37□□□□□ -0.43
ITGA3-207ENST00000506401 MRPS36P82909 103 aaKnown RBP12.37□□□□□ -0.43
ITGA3-207ENST00000506401 GAGE6Q13070 117 aa12.37□□□□□ -0.43
ITGA3-207ENST00000506401 VAMP8Q9BV40 100 aa12.37□□□□□ -0.43
ITGA3-207ENST00000506401 DPM2O94777 84 aa12.36□□□□□ -0.43
ITGA3-207ENST00000506401 OR5A1Q8NGJ0 315 aa12.36□□□□□ -0.43
ITGA3-207ENST00000506401 MRPL35Q9NZE8 188 aaKnown RBP12.36□□□□□ -0.43
ITGA3-207ENST00000506401 MEGF8Q7Z7M0 2845 aa12.35□□□□□ -0.43
ITGA3-207ENST00000506401 F8VRH5 84 aa12.35□□□□□ -0.43
ITGA3-207ENST00000506401 ZNF25P17030 456 aaPredicted RBP12.35□□□□□ -0.43
ITGA3-207ENST00000506401 ZC2HC1BQ5TFG8 222 aa12.35□□□□□ -0.43
ITGA3-207ENST00000506401 FAM104AQ969W3 186 aa12.35□□□□□ -0.43
ITGA3-207ENST00000506401 IGKCP01834 107 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 LELP1Q5T871 98 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 AMELXQ99217 191 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 TRAV9-2A0A087WT02 112 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 HSBP1L1C9JCN9 74 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 TMEM262E9PQX1 116 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 PLNP26678 52 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 TIRAPP58753 221 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 LYPD5Q6UWN5 251 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 Q6ZUT4 128 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
ITGA3-207ENST00000506401 C2orf88Q9BSF0 95 aa12.33□□□□□ -0.44
ITGA3-207ENST00000506401 RNASE13Q5GAN3 156 aaKnown RBP12.32□□□□□ -0.44
ITGA3-207ENST00000506401 PAM16Q9Y3D7 125 aa12.32□□□□□ -0.44
ITGA3-207ENST00000506401 ZNF664Q8N3J9 261 aa12.32□□□□□ -0.44
ITGA3-207ENST00000506401 CDC42SE2Q9NRR3 84 aa12.32□□□□□ -0.44
ITGA3-207ENST00000506401 STAB2Q8WWQ8 2551 aa12.31□□□□□ -0.44
ITGA3-207ENST00000506401 PKIAP61925 76 aa12.31□□□□□ -0.44
ITGA3-207ENST00000506401 A0A1B0GUV1 79 aa12.3□□□□□ -0.44
ITGA3-207ENST00000506401 MAJINQ3KP22 176 aa12.3□□□□□ -0.44
ITGA3-207ENST00000506401 SPATA45Q537H7 98 aa12.3□□□□□ -0.44
ITGA3-207ENST00000506401 TRAV8-6A0A0B4J262 113 aa12.3□□□□□ -0.44
ITGA3-207ENST00000506401 hDV102S1A0JD36 115 aa12.3□□□□□ -0.44
ITGA3-207ENST00000506401 IGLV4-69A0A075B6H9 119 aa12.29□□□□□ -0.44
ITGA3-207ENST00000506401 IGLL5B9A064 214 aa12.29□□□□□ -0.44
ITGA3-207ENST00000506401 IGLV4-60A0A075B6I1 120 aa12.28□□□□□ -0.44
ITGA3-207ENST00000506401 RBX1P62877 108 aa12.27□□□□□ -0.44
ITGA3-207ENST00000506401 ESRGQ1W209 222 aa12.27□□□□□ -0.45
ITGA3-207ENST00000506401 MPV17L2Q567V2 206 aa12.27□□□□□ -0.45
ITGA3-207ENST00000506401 NFE4Q86UQ8 179 aa12.27□□□□□ -0.45
ITGA3-207ENST00000506401 STPG4Q8N801 248 aa12.27□□□□□ -0.45
ITGA3-207ENST00000506401 PRKDCP78527 4128 aaKnown RBP12.27□□□□□ -0.45
ITGA3-207ENST00000506401 A0A0J9YXV3 536 aa12.26□□□□□ -0.45
ITGA3-207ENST00000506401 C11orf86A6NJI1 115 aa12.26□□□□□ -0.45
ITGA3-207ENST00000506401 IGLC3P0DOY3 106 aa12.26□□□□□ -0.45
ITGA3-207ENST00000506401 UBE2D1P51668 147 aa12.25□□□□□ -0.45
ITGA3-207ENST00000506401 PRO1933Q9H354 126 aa12.25□□□□□ -0.45
ITGA3-207ENST00000506401 TSTD3H0UI37 97 aa12.25□□□□□ -0.45
ITGA3-207ENST00000506401 CHAC1Q9BUX1 264 aa12.25□□□□□ -0.45
ITGA3-207ENST00000506401 TRAV13-1A0A0B4J241 112 aa12.24□□□□□ -0.45
ITGA3-207ENST00000506401 TINCRA0A1B0GVN0 87 aa12.24□□□□□ -0.45
ITGA3-207ENST00000506401 SEC11AP67812 179 aa12.24□□□□□ -0.45
ITGA3-207ENST00000506401 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
ITGA3-207ENST00000506401 C14orf144Q96I85 54 aa12.24□□□□□ -0.45
ITGA3-207ENST00000506401 TMEM170BQ5T4T1 132 aa12.23□□□□□ -0.45
ITGA3-207ENST00000506401 GEMIN7Q9H840 131 aaKnown RBP12.23□□□□□ -0.45
ITGA3-207ENST00000506401 ANKRD39Q53RE8 183 aa12.22□□□□□ -0.45
ITGA3-207ENST00000506401 FAM19A3Q7Z5A8 133 aa12.22□□□□□ -0.45
ITGA3-207ENST00000506401 IGKV3OR2-268A0A0C4DH90 116 aa12.21□□□□□ -0.45
ITGA3-207ENST00000506401 ANGP03950 147 aaKnown RBP12.21□□□□□ -0.45
ITGA3-207ENST00000506401 CCL18P55774 89 aa12.21□□□□□ -0.45
ITGA3-207ENST00000506401 HERVK_113P61574 105 aa12.21□□□□□ -0.46
ITGA3-207ENST00000506401 HERVK_113P63121 156 aa12.21□□□□□ -0.46
ITGA3-207ENST00000506401 NUPR2A6NF83 97 aa12.2□□□□□ -0.46
ITGA3-207ENST00000506401 ZNF22P17026 224 aaPredicted RBP12.2□□□□□ -0.46
ITGA3-207ENST00000506401 TCTAP57738 103 aa12.2□□□□□ -0.46
ITGA3-207ENST00000506401 LINC00242Q5T6M2 205 aa12.2□□□□□ -0.46
ITGA3-207ENST00000506401 WFDC10BQ8IUB3 73 aa12.2□□□□□ -0.46
ITGA3-207ENST00000506401 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
ITGA3-207ENST00000506401 A0A1B0GV90 55 aa12.19□□□□□ -0.46
ITGA3-207ENST00000506401 LINC00269Q8N2A0 174 aa12.19□□□□□ -0.46
ITGA3-207ENST00000506401 Q8N3U1 123 aa12.19□□□□□ -0.46
ITGA3-207ENST00000506401 LINC00959A0A1B0GUT2 108 aa12.18□□□□□ -0.46
ITGA3-207ENST00000506401 CCL25O15444 150 aa12.18□□□□□ -0.46
ITGA3-207ENST00000506401 DDTP30046 118 aa12.18□□□□□ -0.46
ITGA3-207ENST00000506401 NMUP48645 174 aa12.18□□□□□ -0.46
ITGA3-207ENST00000506401 SS18Q15532 418 aa12.18□□□□□ -0.46
ITGA3-207ENST00000506401 MRPS16Q9Y3D3 137 aaKnown RBP12.18□□□□□ -0.46
ITGA3-207ENST00000506401 H3BRM9 83 aa12.17□□□□□ -0.46
ITGA3-207ENST00000506401 IGHV3-30P01768 117 aa12.17□□□□□ -0.46
ITGA3-207ENST00000506401 IGHV3-33P01772 117 aa12.17□□□□□ -0.46
ITGA3-207ENST00000506401 IGHV3-30-3P0DP02 117 aa12.17□□□□□ -0.46
ITGA3-207ENST00000506401 IGHV3-30-5P0DP03 117 aa12.17□□□□□ -0.46
ITGA3-207ENST00000506401 COX6A2Q02221 97 aa12.17□□□□□ -0.46
ITGA3-207ENST00000506401 LINC00588Q9Y4M8 146 aa12.17□□□□□ -0.46
ITGA3-207ENST00000506401 TMEM223A0PJW6 202 aa12.16□□□□□ -0.46
ITGA3-207ENST00000506401 E9PLD3 99 aa12.16□□□□□ -0.46
ITGA3-207ENST00000506401 REG3AQ06141 175 aa12.16□□□□□ -0.46
ITGA3-207ENST00000506401 CLPSL2Q6UWE3 100 aa12.16□□□□□ -0.46
ITGA3-207ENST00000506401 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
ITGA3-207ENST00000506401 UQCR10Q9UDW1 63 aa12.16□□□□□ -0.46
ITGA3-207ENST00000506401 APLNQ9ULZ1 77 aa12.16□□□□□ -0.46
ITGA3-207ENST00000506401 IGLV5-45A0A087WSX0 123 aa12.16□□□□□ -0.46
ITGA3-207ENST00000506401 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
ITGA3-207ENST00000506401 IGKV2D-26A0A0A0MRZ7 120 aa12.15□□□□□ -0.46
ITGA3-207ENST00000506401 COX8AP10176 69 aa12.15□□□□□ -0.46
ITGA3-207ENST00000506401 SLC25A34Q6PIV7 304 aa12.15□□□□□ -0.46
ITGA3-207ENST00000506401 CDKN2A-AS1Q9UH64 79 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms