RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 SPANXA1Q9NS26 97 aa13.61□□□□□ -0.23
SMIM20-201ENST00000506197 UBE2D4Q9Y2X8 147 aa13.61□□□□□ -0.23
SMIM20-201ENST00000506197 FAT2Q9NYQ8 4349 aa13.61□□□□□ -0.23
SMIM20-201ENST00000506197 HBDP02042 147 aa13.6□□□□□ -0.23
SMIM20-201ENST00000506197 PMCHL1Q16048 86 aa13.6□□□□□ -0.23
SMIM20-201ENST00000506197 TOMM6Q96B49 74 aa13.6□□□□□ -0.23
SMIM20-201ENST00000506197 KLK12Q9UKR0 248 aa13.6□□□□□ -0.23
SMIM20-201ENST00000506197 DNAH17Q9UFH2 4485 aa13.6□□□□□ -0.23
SMIM20-201ENST00000506197 IGLV4-60A0A075B6I1 120 aa13.59□□□□□ -0.23
SMIM20-201ENST00000506197 NDUFA6P56556 154 aa13.59□□□□□ -0.23
SMIM20-201ENST00000506197 CSDC2Q9Y534 153 aaKnown RBP13.59□□□□□ -0.23
SMIM20-201ENST00000506197 M0R2N4 97 aa13.58□□□□□ -0.24
SMIM20-201ENST00000506197 PYGO1Q9Y3Y4 419 aa13.58□□□□□ -0.24
SMIM20-201ENST00000506197 PKHD1P08F94 4074 aa13.58□□□□□ -0.24
SMIM20-201ENST00000506197 CRPP02741 224 aa13.57□□□□□ -0.24
SMIM20-201ENST00000506197 LINC00310P59036 64 aa13.57□□□□□ -0.24
SMIM20-201ENST00000506197 SCGB3A1Q96QR1 104 aa13.57□□□□□ -0.24
SMIM20-201ENST00000506197 LINC00269Q8N2A0 174 aa13.56□□□□□ -0.24
SMIM20-201ENST00000506197 ZNF664Q8N3J9 261 aa13.56□□□□□ -0.24
SMIM20-201ENST00000506197 A0A096LNJ9 63 aa13.55□□□□□ -0.24
SMIM20-201ENST00000506197 IBA57-AS1B1ANH7 110 aa13.55□□□□□ -0.24
SMIM20-201ENST00000506197 CLPSL2Q6UWE3 100 aa13.55□□□□□ -0.24
SMIM20-201ENST00000506197 Q6ZUT4 128 aa13.55□□□□□ -0.24
SMIM20-201ENST00000506197 ERASQ7Z444 233 aa13.55□□□□□ -0.24
SMIM20-201ENST00000506197 FAM19A2Q8N3H0 131 aa13.55□□□□□ -0.24
SMIM20-201ENST00000506197 UBE2WQ96B02 151 aa13.55□□□□□ -0.24
SMIM20-201ENST00000506197 CDC42SE2Q9NRR3 84 aa13.55□□□□□ -0.24
SMIM20-201ENST00000506197 NUPR1O60356 82 aa13.54□□□□□ -0.24
SMIM20-201ENST00000506197 S100A6P06703 90 aa13.54□□□□□ -0.24
SMIM20-201ENST00000506197 MRPS36P82909 103 aaKnown RBP13.54□□□□□ -0.24
SMIM20-201ENST00000506197 COA6Q5JTJ3 125 aaKnown RBP13.54□□□□□ -0.24
SMIM20-201ENST00000506197 Q6ZN92 141 aa13.54□□□□□ -0.24
SMIM20-201ENST00000506197 LINC00336Q6ZUF6 198 aa13.54□□□□□ -0.24
SMIM20-201ENST00000506197 TMEM141Q96I45 108 aa13.54□□□□□ -0.24
SMIM20-201ENST00000506197 TIMM17AQ99595 171 aa13.54□□□□□ -0.24
SMIM20-201ENST00000506197 KRTAP1-5Q9BYS1 174 aa13.54□□□□□ -0.24
SMIM20-201ENST00000506197 HERC2O95714 4834 aa13.53□□□□□ -0.24
SMIM20-201ENST00000506197 IGLV4-3A0A075B6K6 122 aa13.53□□□□□ -0.24
SMIM20-201ENST00000506197 IGKV3OR2-268A0A0C4DH90 116 aa13.53□□□□□ -0.24
SMIM20-201ENST00000506197 IGIPA6NJ69 53 aa13.53□□□□□ -0.24
SMIM20-201ENST00000506197 NPSP0C0P6 89 aa13.53□□□□□ -0.24
SMIM20-201ENST00000506197 REG3AQ06141 175 aa13.53□□□□□ -0.24
SMIM20-201ENST00000506197 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
SMIM20-201ENST00000506197 TRAV8-3A0A0A6YYJ7 113 aa13.52□□□□□ -0.25
SMIM20-201ENST00000506197 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.52□□□□□ -0.25
SMIM20-201ENST00000506197 PDZD11Q5EBL8 140 aa13.52□□□□□ -0.25
SMIM20-201ENST00000506197 RNASE13Q5GAN3 156 aaKnown RBP13.52□□□□□ -0.25
SMIM20-201ENST00000506197 Q6ZR54 194 aa13.52□□□□□ -0.25
SMIM20-201ENST00000506197 OPRPNQ99935 248 aaPredicted RBP13.52□□□□□ -0.25
SMIM20-201ENST00000506197 Q9HAA7 133 aa13.52□□□□□ -0.25
SMIM20-201ENST00000506197 ATP5LO75964 103 aa13.51□□□□□ -0.25
SMIM20-201ENST00000506197 PRR34Q9NV39 138 aa13.51□□□□□ -0.25
SMIM20-201ENST00000506197 MIAQ16674 131 aa13.5□□□□□ -0.25
SMIM20-201ENST00000506197 ENHOQ6UWT2 76 aa13.5□□□□□ -0.25
SMIM20-201ENST00000506197 TEX43Q6ZNM6 134 aa13.5□□□□□ -0.25
SMIM20-201ENST00000506197 VCX2Q9H322 139 aa13.5□□□□□ -0.25
SMIM20-201ENST00000506197 LEPROTL1O95214 131 aa13.49□□□□□ -0.25
SMIM20-201ENST00000506197 RMI2Q96E14 147 aa13.49□□□□□ -0.25
SMIM20-201ENST00000506197 C2orf88Q9BSF0 95 aa13.49□□□□□ -0.25
SMIM20-201ENST00000506197 IFITM10A6NMD0 228 aa13.48□□□□□ -0.25
SMIM20-201ENST00000506197 NFE4Q86UQ8 179 aa13.48□□□□□ -0.25
SMIM20-201ENST00000506197 HSPB8Q9UJY1 196 aa13.48□□□□□ -0.25
SMIM20-201ENST00000506197 TRAV8-4A0A0B4J246 113 aa13.47□□□□□ -0.25
SMIM20-201ENST00000506197 FABP4P15090 132 aa13.47□□□□□ -0.25
SMIM20-201ENST00000506197 C6orf223Q8N319 242 aa13.47□□□□□ -0.25
SMIM20-201ENST00000506197 FAM104AQ969W3 186 aa13.47□□□□□ -0.25
SMIM20-201ENST00000506197 C1orf43Q9BWL3 253 aa13.47□□□□□ -0.25
SMIM20-201ENST00000506197 PKD1P98161 4303 aa13.46□□□□□ -0.25
SMIM20-201ENST00000506197 IGKV2D-24A0A075B6R9 120 aa13.46□□□□□ -0.25
SMIM20-201ENST00000506197 RTL8CO15255 209 aa13.46□□□□□ -0.25
SMIM20-201ENST00000506197 SS18Q15532 418 aa13.46□□□□□ -0.25
SMIM20-201ENST00000506197 C1orf134Q5TEV5 83 aa13.46□□□□□ -0.25
SMIM20-201ENST00000506197 BAALCQ8WXS3 180 aa13.46□□□□□ -0.25
SMIM20-201ENST00000506197 IFI27L1Q96BM0 104 aa13.46□□□□□ -0.25
SMIM20-201ENST00000506197 IGLV10-54A0A075B6I4 117 aa13.45□□□□□ -0.26
SMIM20-201ENST00000506197 TRAV13-1A0A0B4J241 112 aa13.45□□□□□ -0.26
SMIM20-201ENST00000506197 LINC00959A0A1B0GUT2 108 aa13.45□□□□□ -0.26
SMIM20-201ENST00000506197 PRSS29PA6NIE9 313 aa13.45□□□□□ -0.26
SMIM20-201ENST00000506197 AMELXQ99217 191 aa13.45□□□□□ -0.26
SMIM20-201ENST00000506197 TM2D2Q9BX73 214 aa13.45□□□□□ -0.26
SMIM20-201ENST00000506197 KIAA1109Q2LD37 5005 aa13.45□□□□□ -0.26
SMIM20-201ENST00000506197 CCL25O15444 150 aa13.44□□□□□ -0.26
SMIM20-201ENST00000506197 PMVKQ15126 192 aa13.44□□□□□ -0.26
SMIM20-201ENST00000506197 ZC2HC1BQ5TFG8 222 aa13.44□□□□□ -0.26
SMIM20-201ENST00000506197 LINC00173Q6ZV60 143 aa13.44□□□□□ -0.26
SMIM20-201ENST00000506197 TMA7Q9Y2S6 64 aaKnown RBP13.44□□□□□ -0.26
SMIM20-201ENST00000506197 COX11Q9Y6N1 276 aa13.44□□□□□ -0.26
SMIM20-201ENST00000506197 A0A1B0GVY2 172 aa13.43□□□□□ -0.26
SMIM20-201ENST00000506197 PRSS1P07477 247 aa13.43□□□□□ -0.26
SMIM20-201ENST00000506197 S100A2P29034 98 aa13.43□□□□□ -0.26
SMIM20-201ENST00000506197 PACRGQ96M98 296 aaPredicted RBP13.43□□□□□ -0.26
SMIM20-201ENST00000506197 PSCAO43653 123 aa13.42□□□□□ -0.26
SMIM20-201ENST00000506197 SNRPEP62304 92 aaKnown RBP13.42□□□□□ -0.26
SMIM20-201ENST00000506197 DYNC1H1Q14204 4646 aaKnown RBP13.42□□□□□ -0.26
SMIM20-201ENST00000506197 DNAH11Q96DT5 4516 aa13.42□□□□□ -0.26
SMIM20-201ENST00000506197 HIST3H2BBQ8N257 126 aa13.41□□□□□ -0.26
SMIM20-201ENST00000506197 CHCHD10Q8WYQ3 142 aaPredicted RBP13.41□□□□□ -0.26
SMIM20-201ENST00000506197 CST9LQ9H4G1 147 aa13.41□□□□□ -0.26
SMIM20-201ENST00000506197 XCL1P47992 114 aa13.4□□□□□ -0.26
SMIM20-201ENST00000506197 UBE2D1P51668 147 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms