RNA–Protein interactions for RNA: ENST00000505857.2

TOP1MT-202, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 1 (best)

Gene TOP1MT, Length 2,029 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-202ENST00000505857 TMEM263Q8WUH6 116 aaKnown RBP11.85□□□□□ -0.51
TOP1MT-202ENST00000505857 RETNQ9HD89 108 aa11.85□□□□□ -0.51
TOP1MT-202ENST00000505857 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
TOP1MT-202ENST00000505857 CRYBA4P53673 196 aa11.84□□□□□ -0.51
TOP1MT-202ENST00000505857 WFDC2Q14508 124 aa11.84□□□□□ -0.51
TOP1MT-202ENST00000505857 RRN3P1Q2M238 152 aa11.84□□□□□ -0.51
TOP1MT-202ENST00000505857 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
TOP1MT-202ENST00000505857 RNF183Q96D59 192 aa11.84□□□□□ -0.51
TOP1MT-202ENST00000505857 SCGB1D4Q6XE38 83 aa11.84□□□□□ -0.51
TOP1MT-202ENST00000505857 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
TOP1MT-202ENST00000505857 MRPL16Q9NX20 251 aaKnown RBP11.84□□□□□ -0.51
TOP1MT-202ENST00000505857 TNFRSF18Q9Y5U5 241 aa11.84□□□□□ -0.51
TOP1MT-202ENST00000505857 TMEM170BQ5T4T1 132 aa11.83□□□□□ -0.52
TOP1MT-202ENST00000505857 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
TOP1MT-202ENST00000505857 DNAJC30Q96LL9 226 aa11.83□□□□□ -0.52
TOP1MT-202ENST00000505857 IGLV4-3A0A075B6K6 122 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 TMEM238LA0A1B0GVL6 79 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 A6NJY4 79 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 EMP1P54849 157 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 GAGE13Q4V321 117 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 SBSPONQ8IVN8 264 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 IGHV3-73A0A0B4J1V6 119 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 DEFB4AO15263 64 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 DEFB121Q5J5C9 76 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 OVOL2Q9BRP0 275 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 NOP10Q9NPE3 64 aaKnown RBP11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 PRO0461Q9UI25 63 aa11.82□□□□□ -0.52
TOP1MT-202ENST00000505857 RS1O15537 224 aa11.81□□□□□ -0.52
TOP1MT-202ENST00000505857 IGHV3-53P01767 116 aa11.81□□□□□ -0.52
TOP1MT-202ENST00000505857 C16orf74Q96GX8 76 aa11.81□□□□□ -0.52
TOP1MT-202ENST00000505857 VCX2Q9H322 139 aa11.81□□□□□ -0.52
TOP1MT-202ENST00000505857 NACAE9PAV3 2078 aa11.81□□□□□ -0.52
TOP1MT-202ENST00000505857 H3BMG7 143 aa11.81□□□□□ -0.52
TOP1MT-202ENST00000505857 Q6ZTI0 123 aa11.81□□□□□ -0.52
TOP1MT-202ENST00000505857 SVIPQ8NHG7 77 aa11.81□□□□□ -0.52
TOP1MT-202ENST00000505857 HUWE1Q7Z6Z7 4374 aaKnown RBP11.8□□□□□ -0.52
TOP1MT-202ENST00000505857 ETDBQ3ZM63 59 aa11.8□□□□□ -0.52
TOP1MT-202ENST00000505857 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
TOP1MT-202ENST00000505857 PLEKHB2Q96CS7 222 aa11.8□□□□□ -0.52
TOP1MT-202ENST00000505857 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 A0A0J9YY99 117 aa11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 Q8NAQ8 132 aa11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 AMELXQ99217 191 aa11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 J3QQQ9 107 aa11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 LEPROTO15243 131 aa11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 MRAPQ8TCY5 172 aa11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 OPRPNQ99935 248 aaPredicted RBP11.79□□□□□ -0.52
TOP1MT-202ENST00000505857 TRGV1A0A0A0MS02 117 aa11.78□□□□□ -0.52
TOP1MT-202ENST00000505857 SMIM9A6NGZ8 99 aa11.78□□□□□ -0.52
TOP1MT-202ENST00000505857 ZNF22P17026 224 aaPredicted RBP11.78□□□□□ -0.52
TOP1MT-202ENST00000505857 LGALS3P17931 250 aaKnown RBP11.78□□□□□ -0.52
TOP1MT-202ENST00000505857 TSPEAR-AS2P59090 65 aa11.78□□□□□ -0.52
TOP1MT-202ENST00000505857 SH2D6Q7Z4S9 175 aa11.78□□□□□ -0.52
TOP1MT-202ENST00000505857 SPANXA1Q9NS26 97 aa11.78□□□□□ -0.52
TOP1MT-202ENST00000505857 SRSF9Q13242 221 aaKnown RBP eCLIP11.77□□□□□ -0.52
TOP1MT-202ENST00000505857 DNAH9Q9NYC9 4486 aa11.77□□□□□ -0.52
TOP1MT-202ENST00000505857 Q6ZSN1 163 aa11.77□□□□□ -0.53
TOP1MT-202ENST00000505857 TENM3Q9P273 2699 aa11.77□□□□□ -0.53
TOP1MT-202ENST00000505857 MTURNQ8N3F0 131 aa11.76□□□□□ -0.53
TOP1MT-202ENST00000505857 CHCHD7Q9BUK0 85 aa11.76□□□□□ -0.53
TOP1MT-202ENST00000505857 UBE2D1P51668 147 aa11.76□□□□□ -0.53
TOP1MT-202ENST00000505857 MRPS36P82909 103 aaKnown RBP11.76□□□□□ -0.53
TOP1MT-202ENST00000505857 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
TOP1MT-202ENST00000505857 GAGE7O76087 117 aa11.75□□□□□ -0.53
TOP1MT-202ENST00000505857 GAGE12FP0CL80 117 aa11.75□□□□□ -0.53
TOP1MT-202ENST00000505857 GAGE12GP0CL81 117 aa11.75□□□□□ -0.53
TOP1MT-202ENST00000505857 GAGE12IP0CL82 117 aa11.75□□□□□ -0.53
TOP1MT-202ENST00000505857 CKS1BP61024 79 aa11.75□□□□□ -0.53
TOP1MT-202ENST00000505857 A0A0J9YXV3 536 aa11.74□□□□□ -0.53
TOP1MT-202ENST00000505857 MIFP14174 115 aa11.74□□□□□ -0.53
TOP1MT-202ENST00000505857 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
TOP1MT-202ENST00000505857 UBE2D4Q9Y2X8 147 aa11.74□□□□□ -0.53
TOP1MT-202ENST00000505857 CELA1Q9UNI1 258 aa11.74□□□□□ -0.53
TOP1MT-202ENST00000505857 APOMO95445 188 aa11.73□□□□□ -0.53
TOP1MT-202ENST00000505857 FOXI1Q12951 378 aa11.73□□□□□ -0.53
TOP1MT-202ENST00000505857 FAM222AQ5U5X8 452 aa11.73□□□□□ -0.53
TOP1MT-202ENST00000505857 TM2D3Q9BRN9 247 aa11.73□□□□□ -0.53
TOP1MT-202ENST00000505857 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
TOP1MT-202ENST00000505857 TRBV10-1A0A0K0K1A3 114 aa11.72□□□□□ -0.53
TOP1MT-202ENST00000505857 IGHV3-30P01768 117 aa11.72□□□□□ -0.53
TOP1MT-202ENST00000505857 IGHV3-30-5P0DP03 117 aa11.72□□□□□ -0.53
TOP1MT-202ENST00000505857 DEFB130BP0DP73 79 aa11.72□□□□□ -0.53
TOP1MT-202ENST00000505857 DEFB130AP0DP74 79 aa11.72□□□□□ -0.53
TOP1MT-202ENST00000505857 Q9UF83 564 aa11.72□□□□□ -0.53
TOP1MT-202ENST00000505857 TINCRA0A1B0GVN0 87 aa11.71□□□□□ -0.53
TOP1MT-202ENST00000505857 LYRM7Q5U5X0 104 aa11.7□□□□□ -0.54
TOP1MT-202ENST00000505857 TIMM21Q9BVV7 248 aa11.7□□□□□ -0.54
TOP1MT-202ENST00000505857 PGPEP1Q9NXJ5 209 aa11.7□□□□□ -0.54
TOP1MT-202ENST00000505857 PRKDCP78527 4128 aaKnown RBP11.7□□□□□ -0.54
TOP1MT-202ENST00000505857 TRAV4A0A0B4J268 109 aa11.7□□□□□ -0.54
TOP1MT-202ENST00000505857 TRGV2A0A075B6R0 118 aa11.69□□□□□ -0.54
TOP1MT-202ENST00000505857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
TOP1MT-202ENST00000505857 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
TOP1MT-202ENST00000505857 CEMP1Q6PRD7 247 aaPredicted RBP11.69□□□□□ -0.54
TOP1MT-202ENST00000505857 K7EQD1 137 aa11.68□□□□□ -0.54
TOP1MT-202ENST00000505857 CDIP1Q9H305 208 aa11.68□□□□□ -0.54
TOP1MT-202ENST00000505857 IGHV1-58A0A0C4DH39 117 aa11.67□□□□□ -0.54
TOP1MT-202ENST00000505857 LYRM9A8MSI8 78 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms