RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TSPAN19P0C672 248 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT1GP13640 62 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 UBE2D1P51668 147 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 RRAS2P62070 204 aaPredicted RBP-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 DR1Q01658 176 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 Q5VV11 94 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 MIC13Q5XKP0 118 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 ZNF818PQ6ZRF7 136 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 SSBP3-AS1Q7Z2R9 100 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 WFDC6Q9BQY6 131 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 PRO0255Q9UI72 69 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 COL14A1Q05707 1796 aaKnown RBP-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 DMDP11532 3685 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 NBEAL2Q6ZNJ1 2754 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 CEP350Q5VT06 3117 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 MYO7BQ6PIF6 2116 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 DOPEY1Q5JWR5 2465 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 NRXN2Q9P2S2 1712 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 BOD1L1Q8NFC6 3051 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 GOLGA3Q08378 1498 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 VPS13CQ709C8 3753 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 USP34Q70CQ2 3546 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 FASNP49327 2511 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 DNAH11Q96DT5 4516 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 CNOT1A5YKK6 2376 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 ZNF609O15014 1411 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 SPTBN1Q01082 2364 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 CFAP46Q8IYW2 2715 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 CCDC168Q8NDH2 2452 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 UNC80Q8N2C7 3258 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 LRRC37A3O60309 1634 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 NHSL1Q5SYE7 1610 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 BIVM-ERCC5R4GMW8 1640 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 FAM92AA1XBS5 289 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 K7ERU9 68 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 M0R2T5 61 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 M0R3E3 92 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 SNCGO76070 127 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT1BP07438 61 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 IGLC6P0CF74 106 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 CBLN1P23435 193 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 CKS1BP61024 79 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 WFDC2Q14508 124 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 LELP1Q5T871 98 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 Q6ZUT4 128 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 BAGE3Q86Y29 109 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 WFDC9Q8NEX5 89 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 C10orf82Q8WW14 230 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 SPTSSAQ969W0 71 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 TCEAL4Q96EI5 215 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 SMIM3Q9BZL3 60 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 LINC00846Q9NV44 126 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 DNAH10Q8IVF4 4471 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 DNAH8Q96JB1 4490 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 HECTD1Q9ULT8 2610 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 CFAP54Q96N23 3096 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 PKD1L2Q7Z442 2459 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 CHD8Q9HCK8 2581 aa-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 GOLGA4Q13439 2230 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 UTP20O75691 2785 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P29-201ENST00000505659 AKAP6Q13023 2319 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 LRRK2Q5S007 2527 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 PRG4Q92954 1404 aaPredicted RBP-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 WDFY4Q6ZS81 3184 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 SPEGQ15772 3267 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 NBASA2RRP1 2371 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 CFAP47Q6ZTR5 3102 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 KIF13AQ9H1H9 1805 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 ITPR3Q14573 2671 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 TRAV22A0A0B4J277 110 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 PIGBOS1A0A0B4J2F0 54 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 G3V318 75 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 H0YAA0 97 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 M0R129 80 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 NDUFB6O95139 128 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT1HL1P0DM35 61 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 S100A3P33764 101 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 GUCA1AP43080 201 aaPredicted RBP-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 UBE2G1P62253 170 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 KRTAP8-1Q8IUC2 63 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 SPTSSBQ8NFR3 76 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 SPCS1Q9Y6A9 102 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 DNAH12Q6ZR08 3092 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 FREM2Q5SZK8 3169 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 ARHGEF10O15013 1369 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 KNL1Q8NG31 2342 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 ADGRB1O14514 1584 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 LOC400499M0QZD8 3231 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 MUC3AQ02505 3323 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 DOPEY2Q9Y3R5 2298 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 XIRP2A4UGR9 3374 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 VCANP13611 3396 aa-0.12□□□□□ -2.43
HMGB1P29-201ENST00000505659 FHAD1B1AJZ9 1412 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 PHIPQ8WWQ0 1821 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 SPG11Q96JI7 2443 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 MYO9AB2RTY4 2548 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 TLN2Q9Y4G6 2542 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 PCNTO95613 3336 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 WDFY3Q8IZQ1 3526 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms