RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 NRKQ7Z2Y5 1582 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 GPR98Q8WXG9 6306 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 USF3Q68DE3 2245 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 MYOZ3Q8TDC0 251 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 PRO0255Q9UI72 69 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 GNG8Q9UK08 70 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
CHD1-203ENST00000505657 ABCA3Q99758 1704 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 MYOM1P52179 1685 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 SCN7AQ01118 1682 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 LAMC1P11047 1609 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 BIVM-ERCC5R4GMW8 1640 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 ARHGEF5Q12774 1597 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 SMG6Q86US8 1419 aaKnown RBP0.23□□□□□ -2.37
CHD1-203ENST00000505657 PTPRQQ9UMZ3 2332 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 F8VRH5 84 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 SSSCA1O60232 199 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 TNFP01375 233 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 SPINK8P0C7L1 97 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 GNG4P50150 75 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 TMEM170BQ5T4T1 132 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 BAGE2Q86Y30 109 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 C2orf88Q9BSF0 95 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 ERCC6L2Q5T890 1561 aa0.23□□□□□ -2.37
CHD1-203ENST00000505657 A0A0D9SFI3 127 aa0.22□□□□□ -2.37
CHD1-203ENST00000505657 UBE2L5PA0A1B0GUS4 154 aa0.22□□□□□ -2.37
CHD1-203ENST00000505657 IGLC7A0M8Q6 106 aa0.22□□□□□ -2.37
CHD1-203ENST00000505657 CORTO00230 105 aa0.22□□□□□ -2.37
CHD1-203ENST00000505657 HMGN4O00479 90 aa0.22□□□□□ -2.37
CHD1-203ENST00000505657 PPP3R1P63098 170 aa0.22□□□□□ -2.37
CHD1-203ENST00000505657 UBE2L3P68036 154 aaKnown RBP0.22□□□□□ -2.37
CHD1-203ENST00000505657 AMELXQ99217 191 aa0.22□□□□□ -2.37
CHD1-203ENST00000505657 CHD1O14646 1710 aa0.21□□□□□ -2.38
CHD1-203ENST00000505657 SYNE1Q8NF91 8797 aaKnown RBP0.21□□□□□ -2.38
CHD1-203ENST00000505657 WNK2Q9Y3S1 2297 aa0.21□□□□□ -2.38
CHD1-203ENST00000505657 PEG3Q9GZU2 1588 aa0.21□□□□□ -2.38
CHD1-203ENST00000505657 FAM24AA6NFZ4 105 aa0.21□□□□□ -2.38
CHD1-203ENST00000505657 BCE1O60756 84 aa0.21□□□□□ -2.38
CHD1-203ENST00000505657 SVBPQ8N300 66 aa0.21□□□□□ -2.38
CHD1-203ENST00000505657 CNFNQ9BYD5 112 aa0.21□□□□□ -2.38
CHD1-203ENST00000505657 NCOR1O75376 2440 aa0.21□□□□□ -2.38
CHD1-203ENST00000505657 TOP2BQ02880 1626 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 PDCD11Q14690 1871 aaKnown RBP0.2□□□□□ -2.38
CHD1-203ENST00000505657 TSC2P49815 1807 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 PKDREJQ9NTG1 2253 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 TRAV22A0A0B4J277 110 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 CHKB-CPT1BH3BT56 60 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 UQCR11O14957 56 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 APOC3P02656 99 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 GNG11P61952 73 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 COX17Q14061 63 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 TMEM203Q969S6 136 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 DPH3P1Q9H4G8 78 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 IER3IP1Q9Y5U9 82 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 SPHKAPQ2M3C7 1700 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 PZPP20742 1482 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 C10orf71Q711Q0 1435 aa0.2□□□□□ -2.38
CHD1-203ENST00000505657 AKAP6Q13023 2319 aa0.19□□□□□ -2.38
CHD1-203ENST00000505657 WDR7Q9Y4E6 1490 aa0.19□□□□□ -2.38
CHD1-203ENST00000505657 IFITM1P13164 125 aa0.19□□□□□ -2.38
CHD1-203ENST00000505657 Q6JHZ5 121 aa0.19□□□□□ -2.38
CHD1-203ENST00000505657 LINC00472Q9H8W2 130 aa0.19□□□□□ -2.38
CHD1-203ENST00000505657 LINC01558Q9Y6Z2 57 aa0.19□□□□□ -2.38
CHD1-203ENST00000505657 NHSL1Q5SYE7 1610 aa0.19□□□□□ -2.38
CHD1-203ENST00000505657 SCAPERQ9BY12 1400 aa0.19□□□□□ -2.38
CHD1-203ENST00000505657 NUP188Q5SRE5 1749 aa0.18□□□□□ -2.38
CHD1-203ENST00000505657 LRP1Q07954 4544 aaKnown RBP0.18□□□□□ -2.38
CHD1-203ENST00000505657 SPTBN1Q01082 2364 aaKnown RBP0.18□□□□□ -2.38
CHD1-203ENST00000505657 RAPGEF6Q8TEU7 1601 aa0.18□□□□□ -2.38
CHD1-203ENST00000505657 SFT2D2O95562 160 aa0.18□□□□□ -2.38
CHD1-203ENST00000505657 CFDP00746 253 aaPredicted RBP0.18□□□□□ -2.38
CHD1-203ENST00000505657 ATP5EP56381 51 aaPredicted RBP0.18□□□□□ -2.38
CHD1-203ENST00000505657 UQCR10Q9UDW1 63 aa0.18□□□□□ -2.38
CHD1-203ENST00000505657 SPCS1Q9Y6A9 102 aa0.18□□□□□ -2.38
CHD1-203ENST00000505657 PPRC1Q5VV67 1664 aaKnown RBP0.18□□□□□ -2.38
CHD1-203ENST00000505657 TOPAZ1Q8N9V7 1692 aa0.18□□□□□ -2.38
CHD1-203ENST00000505657 GOLGA4Q13439 2230 aaKnown RBP0.17□□□□□ -2.38
CHD1-203ENST00000505657 LOC285095A0A1B0GVY8 99 aa0.17□□□□□ -2.38
CHD1-203ENST00000505657 M0R3E3 92 aa0.17□□□□□ -2.38
CHD1-203ENST00000505657 S100A3P33764 101 aa0.17□□□□□ -2.38
CHD1-203ENST00000505657 MRPS10P82664 201 aaKnown RBP0.17□□□□□ -2.38
CHD1-203ENST00000505657 SFTA2Q6UW10 78 aa0.17□□□□□ -2.38
CHD1-203ENST00000505657 MANBALQ9NQG1 85 aa0.17□□□□□ -2.38
CHD1-203ENST00000505657 NCOA3Q9Y6Q9 1424 aa0.17□□□□□ -2.38
CHD1-203ENST00000505657 U3KQA8 63 aa0.17□□□□□ -2.38
CHD1-203ENST00000505657 FAM135AQ9P2D6 1515 aa0.17□□□□□ -2.38
CHD1-203ENST00000505657 ANKRD36A6QL64 1941 aa0.17□□□□□ -2.38
CHD1-203ENST00000505657 PAPPAQ13219 1627 aa0.16□□□□□ -2.38
CHD1-203ENST00000505657 FXYD6-FXYD2A0A087WZ82 144 aa0.16□□□□□ -2.38
CHD1-203ENST00000505657 SNCAP37840 140 aa0.16□□□□□ -2.38
CHD1-203ENST00000505657 DCDP81605 110 aaKnown RBP0.16□□□□□ -2.38
CHD1-203ENST00000505657 Q0VG73 95 aa0.16□□□□□ -2.38
CHD1-203ENST00000505657 GTF2H5Q6ZYL4 71 aa0.16□□□□□ -2.38
CHD1-203ENST00000505657 MAPKBP1O60336 1514 aa0.16□□□□□ -2.38
CHD1-203ENST00000505657 ARHGAP5Q13017 1502 aa0.16□□□□□ -2.38
CHD1-203ENST00000505657 HIVEP3Q5T1R4 2406 aa0.16□□□□□ -2.38
CHD1-203ENST00000505657 DMBT1Q9UGM3 2413 aaPredicted RBP0.16□□□□□ -2.38
CHD1-203ENST00000505657 ZFHX3Q15911 3703 aa0.15□□□□□ -2.38
CHD1-203ENST00000505657 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
CHD1-203ENST00000505657 SYNE2Q8WXH0 6885 aaKnown RBP0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms