RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 S100A8P05109 93 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 OR5AL1P0C617 328 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 RIGQ13278 110 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 TMEM136Q6ZRR5 245 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 SSBP4Q9BWG4 385 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-210ENST00000505589 GNB1LQ9BYB4 327 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 PKIGQ9Y2B9 76 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 C1orf196B1AJZ1 125 aa6.3□□□□□ -1.4
NEDD9-210ENST00000505589 CAMPP49913 170 aa6.3□□□□□ -1.4
NEDD9-210ENST00000505589 LINC00269Q8N2A0 174 aa6.3□□□□□ -1.4
NEDD9-210ENST00000505589 GATD1Q8NB37 220 aa6.3□□□□□ -1.4
NEDD9-210ENST00000505589 PLAC8Q9NZF1 115 aa6.3□□□□□ -1.4
NEDD9-210ENST00000505589 TMA7Q9Y2S6 64 aaKnown RBP6.3□□□□□ -1.4
NEDD9-210ENST00000505589 PHOX2AO14813 284 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 TRGC2P03986 189 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 SMIM17P0DL12 118 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 RAB5BP61020 215 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 CACNG7P62955 275 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 REG3AQ06141 175 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 ZNF56Q15929 161 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 SPINK6Q6UWN8 80 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 OR10AG1Q8NH19 301 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 MRPL18Q9H0U6 180 aaKnown RBP6.29□□□□□ -1.4
NEDD9-210ENST00000505589 TRAPPC1Q9Y5R8 145 aa6.29□□□□□ -1.4
NEDD9-210ENST00000505589 MUC21A0A0G2JKD1 596 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 A0A0J9YXV3 536 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 MUC21A0A140T8X8 626 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 A0A1B0GUV1 79 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 F5H697 171 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 RBX1P62877 108 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 FABP9Q0Z7S8 132 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 TWIST1Q15672 202 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 NEXN-AS1Q8NBZ9 246 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 SPACA4Q8TDM5 124 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 LINC00474Q9P2X8 69 aa6.28□□□□□ -1.4
NEDD9-210ENST00000505589 IGHV1-24A0A0C4DH33 117 aa6.27□□□□□ -1.41
NEDD9-210ENST00000505589 H7C1H1 209 aa6.27□□□□□ -1.41
NEDD9-210ENST00000505589 APCSP02743 223 aa6.27□□□□□ -1.41
NEDD9-210ENST00000505589 NTF3P20783 257 aa6.27□□□□□ -1.41
NEDD9-210ENST00000505589 ODF1Q14990 250 aa6.27□□□□□ -1.41
NEDD9-210ENST00000505589 SPANXN1Q5VSR9 72 aa6.27□□□□□ -1.41
NEDD9-210ENST00000505589 RNF213Q63HN8 5207 aa6.27□□□□□ -1.41
NEDD9-210ENST00000505589 IGLV10-54A0A075B6I4 117 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 PANO1I0J062 215 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST1H2BKO60814 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST1H2BJP06899 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 TRGC1P0CF51 173 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST1H2BOP23527 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST1H2BBP33778 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST1H2BDP58876 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 SSTP61278 116 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST1H2BCP62807 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 GAGE6Q13070 117 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST2H2BEQ16778 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 IQCJQ1A5X6 159 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-210ENST00000505589 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST1H2BHQ93079 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 AP1S3Q96PC3 154 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST1H2BNQ99877 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 HIST1H2BMQ99879 126 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 TMEM191AQ9H0A3 160 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 KIF25-AS1Q9Y6Z4 181 aa6.26□□□□□ -1.41
NEDD9-210ENST00000505589 FAM104BQ5XKR9 115 aa6.25□□□□□ -1.41
NEDD9-210ENST00000505589 SMIM15Q7Z3B0 74 aa6.25□□□□□ -1.41
NEDD9-210ENST00000505589 UBE2L6O14933 153 aa6.24□□□□□ -1.41
NEDD9-210ENST00000505589 GAS8-AS1O95177 125 aa6.24□□□□□ -1.41
NEDD9-210ENST00000505589 MAJINQ3KP22 176 aa6.24□□□□□ -1.41
NEDD9-210ENST00000505589 CLPSL2Q6UWE3 100 aa6.24□□□□□ -1.41
NEDD9-210ENST00000505589 A0A0U1RQV1 116 aa6.23□□□□□ -1.41
NEDD9-210ENST00000505589 PRR3P79522 188 aaKnown RBP6.23□□□□□ -1.41
NEDD9-210ENST00000505589 COX6A2Q02221 97 aa6.23□□□□□ -1.41
NEDD9-210ENST00000505589 KIAA1644Q3SXP7 199 aa6.23□□□□□ -1.41
NEDD9-210ENST00000505589 MRPL51Q4U2R6 128 aaKnown RBP6.23□□□□□ -1.41
NEDD9-210ENST00000505589 XP32Q5T750 250 aa6.23□□□□□ -1.41
NEDD9-210ENST00000505589 Q6ZRP5 223 aa6.23□□□□□ -1.41
NEDD9-210ENST00000505589 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
NEDD9-210ENST00000505589 AMN1Q8IY45 258 aa6.23□□□□□ -1.41
NEDD9-210ENST00000505589 STPG4Q8N801 248 aa6.23□□□□□ -1.41
NEDD9-210ENST00000505589 ALKBH7Q9BT30 221 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-210ENST00000505589 S100A6P06703 90 aa6.22□□□□□ -1.41
NEDD9-210ENST00000505589 CHTF8P0CG12 524 aa6.22□□□□□ -1.41
NEDD9-210ENST00000505589 RAB4AP20338 218 aa6.22□□□□□ -1.41
NEDD9-210ENST00000505589 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
NEDD9-210ENST00000505589 D6R8Y8 96 aa6.21□□□□□ -1.42
NEDD9-210ENST00000505589 PPBPP02775 128 aa6.21□□□□□ -1.42
NEDD9-210ENST00000505589 SLPIP03973 132 aa6.21□□□□□ -1.42
NEDD9-210ENST00000505589 COA6Q5JTJ3 125 aaKnown RBP6.21□□□□□ -1.42
NEDD9-210ENST00000505589 ORMDL3Q8N138 153 aa6.21□□□□□ -1.42
NEDD9-210ENST00000505589 C20orf203Q8NBC4 194 aa6.21□□□□□ -1.42
NEDD9-210ENST00000505589 MRAP2Q96G30 205 aa6.21□□□□□ -1.42
NEDD9-210ENST00000505589 IGKV2-24A0A0C4DH68 120 aa6.2□□□□□ -1.42
NEDD9-210ENST00000505589 NCR2O95944 276 aa6.2□□□□□ -1.42
NEDD9-210ENST00000505589 MGPP08493 103 aa6.2□□□□□ -1.42
NEDD9-210ENST00000505589 CKS2P33552 79 aa6.2□□□□□ -1.42
NEDD9-210ENST00000505589 NDUFA6P56556 154 aa6.2□□□□□ -1.42
NEDD9-210ENST00000505589 SRSF9Q13242 221 aaKnown RBP eCLIP6.2□□□□□ -1.42
NEDD9-210ENST00000505589 ZNF664Q8N3J9 261 aa6.2□□□□□ -1.42
NEDD9-210ENST00000505589 C18orf32Q8TCD1 76 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms