RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 TPRP12270 2363 aaKnown RBP0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 ANKHD1Q8IWZ3 2542 aaKnown RBP0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 ERCC6L2Q5T890 1561 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 NRKQ7Z2Y5 1582 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 TRBV7-3A0A075B6L6 115 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 F8VRH5 84 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 CFDP00746 253 aaPredicted RBP0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 TNFP01375 233 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 GNG11P61952 73 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 PPP3R1P63098 170 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 WHAMMP3Q1A5X7 153 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 SBF2Q86WG5 1849 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 ZMYM4Q5VZL5 1548 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 FAM135AQ9P2D6 1515 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 KDM3BQ7LBC6 1761 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 POLQO75417 2590 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 ZFYVE26Q68DK2 2539 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 KIF21AQ7Z4S6 1674 aa0.21□□□□□ -2.38
UBE2D3-218ENST00000505009 PSME4Q14997 1843 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 FAT4Q6V0I7 4981 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 PIEZO1Q92508 2521 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 IGF2RP11717 2491 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 MAPKBP1O60336 1514 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 NAP1L6A6NFF2 107 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 LINC00587B1AMM8 73 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 G3V318 75 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 DCDP81605 110 aaKnown RBP0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 AMELXQ99217 191 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 NDUFA4L2Q9NRX3 87 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 IER3IP1Q9Y5U9 82 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 ROBO1Q9Y6N7 1651 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 AHCTF1Q8WYP5 2266 aa0.2□□□□□ -2.38
UBE2D3-218ENST00000505009 MAST4O15021 2626 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 F8P00451 2351 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 RYR3Q15413 4870 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 SHANK2Q9UPX8 1470 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 FXYD6-FXYD2A0A087WZ82 144 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 IGLC7A0M8Q6 106 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 OOSP1A8MZH6 123 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 CHKB-CPT1BH3BT56 60 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 M0R3E3 92 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 CORTO00230 105 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 SFT2D2O95562 160 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 MGPP08493 103 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 COX6CP09669 75 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 TRAPPC2P0DI81 140 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 TRAPPC2BP0DI82 140 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 KRTDAPP60985 99 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 Q6JHZ5 121 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 TSLPQ969D9 159 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 C12orf57Q99622 126 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 C2orf88Q9BSF0 95 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 BSNQ9UPA5 3926 aa0.19□□□□□ -2.38
UBE2D3-218ENST00000505009 FAM208BQ5VWN6 2430 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 RIMS1Q86UR5 1692 aaKnown RBP0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 PLXNB2O15031 1838 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 SHROOM2Q13796 1616 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 NHSL1Q5SYE7 1610 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 RAPGEF6Q8TEU7 1601 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 BIVM-ERCC5R4GMW8 1640 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 C20orf202A1L168 122 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 HMGN4O00479 90 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 UBA52P62987 128 aaKnown RBP0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 PIGYQ3MUY2 71 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 Q8IZM0 81 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 TCEAL7Q9BRU2 100 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 TP53AIP1Q9HCN2 124 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 NXT2Q9NPJ8 142 aaKnown RBP0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 MANBALQ9NQG1 85 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 LINC01558Q9Y6Z2 57 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 U3KQA8 63 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 C10orf71Q711Q0 1435 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 KDM5AP29375 1690 aaKnown RBP0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 MYOM1P52179 1685 aa0.18□□□□□ -2.38
UBE2D3-218ENST00000505009 ZNF236Q9UL36 1845 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 CELSR2Q9HCU4 2923 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 LRP6O75581 1613 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 ASXL3Q9C0F0 2248 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 TRBV6-1A0A0K0K1D8 114 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 CRYM-AS1A6NIL9 109 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 H3BQ15 152 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 Q0VG73 95 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 FDCSPQ8NFU4 85 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 FAM167A-AS1Q96KT0 104 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 VAMP8Q9BV40 100 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 SCAPERQ9BY12 1400 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 PRO1933Q9H354 126 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 DPH3P1Q9H4G8 78 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 PRO1854Q9UHT4 67 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 ARL2-SNX15V9GYD0 113 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 SPTBN4Q9H254 2564 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 TET3O43151 1660 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 ARHGAP5Q13017 1502 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 SYNE1Q8NF91 8797 aaKnown RBP0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 SPTBN2O15020 2390 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 CACNA1CQ13936 2221 aa0.17□□□□□ -2.38
UBE2D3-218ENST00000505009 LAMC1P11047 1609 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 TOP2BQ02880 1626 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms