RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 C16orf90A8MZG2 172 aa6.61□□□□□ -1.35
NR1I3-220ENST00000505005 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
NR1I3-220ENST00000505005 GAGE6Q13070 117 aa6.61□□□□□ -1.35
NR1I3-220ENST00000505005 MRPL51Q4U2R6 128 aaKnown RBP6.61□□□□□ -1.35
NR1I3-220ENST00000505005 CFAP161Q6P656 301 aa6.61□□□□□ -1.35
NR1I3-220ENST00000505005 NTM-AS1Q6ZSK4 140 aa6.61□□□□□ -1.35
NR1I3-220ENST00000505005 RNF185Q96GF1 192 aa6.61□□□□□ -1.35
NR1I3-220ENST00000505005 CSDC2Q9Y534 153 aaKnown RBP6.61□□□□□ -1.35
NR1I3-220ENST00000505005 TRAV26-2A0A0B4J265 109 aa6.6□□□□□ -1.35
NR1I3-220ENST00000505005 REG3AQ06141 175 aa6.6□□□□□ -1.35
NR1I3-220ENST00000505005 MPV17L2Q567V2 206 aa6.6□□□□□ -1.35
NR1I3-220ENST00000505005 SPATA12Q7Z6I5 190 aa6.6□□□□□ -1.35
NR1I3-220ENST00000505005 PKIGQ9Y2B9 76 aa6.6□□□□□ -1.35
NR1I3-220ENST00000505005 PRSS47A8MTI9 375 aa6.59□□□□□ -1.35
NR1I3-220ENST00000505005 TNFRSF6BO95407 300 aa6.59□□□□□ -1.35
NR1I3-220ENST00000505005 RNASEKQ6P5S7 137 aaKnown RBP6.59□□□□□ -1.35
NR1I3-220ENST00000505005 MRPL52Q86TS9 123 aaKnown RBP6.59□□□□□ -1.35
NR1I3-220ENST00000505005 LINC00269Q8N2A0 174 aa6.59□□□□□ -1.35
NR1I3-220ENST00000505005 OR5A1Q8NGJ0 315 aa6.59□□□□□ -1.35
NR1I3-220ENST00000505005 C18orf32Q8TCD1 76 aa6.59□□□□□ -1.35
NR1I3-220ENST00000505005 RPL39LQ96EH5 51 aaKnown RBP6.59□□□□□ -1.35
NR1I3-220ENST00000505005 FGF6P10767 208 aa6.58□□□□□ -1.36
NR1I3-220ENST00000505005 NDUFA6P56556 154 aa6.58□□□□□ -1.36
NR1I3-220ENST00000505005 Q8N814 137 aa6.58□□□□□ -1.36
NR1I3-220ENST00000505005 CHCHD1Q96BP2 118 aaKnown RBP6.58□□□□□ -1.36
NR1I3-220ENST00000505005 PRELID3AQ96N28 172 aa6.58□□□□□ -1.36
NR1I3-220ENST00000505005 TIMM21Q9BVV7 248 aa6.58□□□□□ -1.36
NR1I3-220ENST00000505005 MAP1LC3AQ9H492 121 aa6.58□□□□□ -1.36
NR1I3-220ENST00000505005 IGLV5-52A0A0A0MRZ9 124 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 D6R8Y8 96 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 CDK2AP2O75956 126 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 NPSP0C0P6 89 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 SNRPEP62304 92 aaKnown RBP6.57□□□□□ -1.36
NR1I3-220ENST00000505005 SS18Q15532 418 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 ORMDL2Q53FV1 153 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 PAPPA-AS1Q5QFB9 102 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 ENHOQ6UWT2 76 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 BAGE3Q86Y29 109 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 NRACQ8N912 160 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 SMIM2Q9BVW6 85 aa6.57□□□□□ -1.36
NR1I3-220ENST00000505005 NXT2Q9NPJ8 142 aaKnown RBP6.57□□□□□ -1.36
NR1I3-220ENST00000505005 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
NR1I3-220ENST00000505005 LOC105371267A0A1B0GV96 52 aa6.56□□□□□ -1.36
NR1I3-220ENST00000505005 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
NR1I3-220ENST00000505005 LINC01546A6NGU7 62 aa6.56□□□□□ -1.36
NR1I3-220ENST00000505005 GCSHP23434 173 aa6.56□□□□□ -1.36
NR1I3-220ENST00000505005 KIAA1644Q3SXP7 199 aa6.56□□□□□ -1.36
NR1I3-220ENST00000505005 C20orf203Q8NBC4 194 aa6.56□□□□□ -1.36
NR1I3-220ENST00000505005 AP5S1Q9NUS5 200 aa6.56□□□□□ -1.36
NR1I3-220ENST00000505005 SERF1AO75920 110 aa6.55□□□□□ -1.36
NR1I3-220ENST00000505005 TSHBP01222 138 aa6.55□□□□□ -1.36
NR1I3-220ENST00000505005 S100A2P29034 98 aa6.55□□□□□ -1.36
NR1I3-220ENST00000505005 ZNF664Q8N3J9 261 aa6.55□□□□□ -1.36
NR1I3-220ENST00000505005 SPANXA1Q9NS26 97 aa6.55□□□□□ -1.36
NR1I3-220ENST00000505005 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
NR1I3-220ENST00000505005 LINC00614P0C842 121 aa6.54□□□□□ -1.36
NR1I3-220ENST00000505005 IFI27P40305 119 aaPredicted RBP6.54□□□□□ -1.36
NR1I3-220ENST00000505005 Q8N8P6 123 aa6.54□□□□□ -1.36
NR1I3-220ENST00000505005 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
NR1I3-220ENST00000505005 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.53□□□□□ -1.36
NR1I3-220ENST00000505005 IGKV2-29A2NJV5 120 aaPredicted RBP6.53□□□□□ -1.36
NR1I3-220ENST00000505005 SMKR1H3BMG3 65 aa6.53□□□□□ -1.36
NR1I3-220ENST00000505005 HSBP1O75506 76 aa6.53□□□□□ -1.36
NR1I3-220ENST00000505005 APOMO95445 188 aa6.53□□□□□ -1.36
NR1I3-220ENST00000505005 LINC00310P59036 64 aa6.53□□□□□ -1.36
NR1I3-220ENST00000505005 MRPS36P82909 103 aaKnown RBP6.53□□□□□ -1.36
NR1I3-220ENST00000505005 BAALCQ8WXS3 180 aa6.53□□□□□ -1.36
NR1I3-220ENST00000505005 HIST1H2BLQ99880 126 aa6.53□□□□□ -1.36
NR1I3-220ENST00000505005 PYGO1Q9Y3Y4 419 aa6.53□□□□□ -1.36
NR1I3-220ENST00000505005 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
NR1I3-220ENST00000505005 IGLV4-60A0A075B6I1 120 aa6.52□□□□□ -1.37
NR1I3-220ENST00000505005 NPYP01303 97 aa6.52□□□□□ -1.37
NR1I3-220ENST00000505005 SEC11AP67812 179 aa6.52□□□□□ -1.37
NR1I3-220ENST00000505005 Q6ZN92 141 aa6.52□□□□□ -1.37
NR1I3-220ENST00000505005 FA2HQ7L5A8 372 aa6.52□□□□□ -1.37
NR1I3-220ENST00000505005 Q8N3U1 123 aa6.52□□□□□ -1.37
NR1I3-220ENST00000505005 PRSS3P2Q8NHM4 247 aa6.52□□□□□ -1.37
NR1I3-220ENST00000505005 CYSLTR1Q9Y271 337 aa6.52□□□□□ -1.37
NR1I3-220ENST00000505005 IFITM10A6NMD0 228 aa6.51□□□□□ -1.37
NR1I3-220ENST00000505005 F8WDY8 70 aa6.51□□□□□ -1.37
NR1I3-220ENST00000505005 CD164L2Q6UWJ8 174 aa6.51□□□□□ -1.37
NR1I3-220ENST00000505005 C2orf88Q9BSF0 95 aa6.51□□□□□ -1.37
NR1I3-220ENST00000505005 UBE2D4Q9Y2X8 147 aa6.51□□□□□ -1.37
NR1I3-220ENST00000505005 DNAH17Q9UFH2 4485 aa6.51□□□□□ -1.37
NR1I3-220ENST00000505005 IGHV1-58A0A0C4DH39 117 aa6.5□□□□□ -1.37
NR1I3-220ENST00000505005 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
NR1I3-220ENST00000505005 USP17L23D6RBM5 183 aa6.5□□□□□ -1.37
NR1I3-220ENST00000505005 SMIM6P0DI80 62 aa6.5□□□□□ -1.37
NR1I3-220ENST00000505005 FABP4P15090 132 aa6.5□□□□□ -1.37
NR1I3-220ENST00000505005 AKR1D1P51857 326 aa6.5□□□□□ -1.37
NR1I3-220ENST00000505005 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
NR1I3-220ENST00000505005 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
NR1I3-220ENST00000505005 URB1-AS1Q96HZ7 61 aa6.5□□□□□ -1.37
NR1I3-220ENST00000505005 IGLV10-54A0A075B6I4 117 aa6.49□□□□□ -1.37
NR1I3-220ENST00000505005 GAS8-AS1O95177 125 aa6.49□□□□□ -1.37
NR1I3-220ENST00000505005 MALP21145 153 aa6.49□□□□□ -1.37
NR1I3-220ENST00000505005 CLPSL2Q6UWE3 100 aa6.49□□□□□ -1.37
NR1I3-220ENST00000505005 HSPB8Q9UJY1 196 aa6.49□□□□□ -1.37
NR1I3-220ENST00000505005 HECTD4Q9Y4D8 3996 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms