RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 OPRPNQ99935 248 aaPredicted RBP3□□□□□ -1.93
RFC1-208ENST00000504849 AGPAT4-IT1Q9H0P7 198 aa3□□□□□ -1.93
RFC1-208ENST00000504849 PRORYQ9H606 182 aa3□□□□□ -1.93
RFC1-208ENST00000504849 DHRS4-AS1Q9P1J3 65 aa3□□□□□ -1.93
RFC1-208ENST00000504849 PRO1854Q9UHT4 67 aa3□□□□□ -1.93
RFC1-208ENST00000504849 PHLDA3Q9Y5J5 127 aa3□□□□□ -1.93
RFC1-208ENST00000504849 SMAD5-AS1Q9Y6J3 95 aa3□□□□□ -1.93
RFC1-208ENST00000504849 S4R3C0 116 aa3□□□□□ -1.93
RFC1-208ENST00000504849 SVILO95425 2214 aa3□□□□□ -1.93
RFC1-208ENST00000504849 ATRQ13535 2644 aa3□□□□□ -1.93
RFC1-208ENST00000504849 CELSR1Q9NYQ6 3014 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 HCFC1P51610 2035 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 CELSR2Q9HCU4 2923 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 TRAV26-2A0A0B4J265 109 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 A0A0J9YY99 117 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 E7EQL1 145 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 LEPROTO15243 131 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 SLC25A20O43772 301 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 IGHV3-23P01764 117 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 COX6CP09669 75 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 IFITM1P13164 125 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 COX6B1P14854 86 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 INSL3P51460 131 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 EBI3Q14213 229 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 Q1RN00 199 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 KLK9Q2XQG4 91 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 C15orf32Q32M92 178 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 PLEKHB2Q96CS7 222 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 KLK9Q9UKQ9 250 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 FREM1Q5H8C1 2179 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 ADGRG4Q8IZF6 3080 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 PCNX2A6NKB5 2137 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 PI4KAP42356 2102 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 HIVEP1P15822 2718 aa2.99□□□□□ -1.93
RFC1-208ENST00000504849 A0A0J9YX75 114 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 FAM223BA6NKX1 122 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 C9JAW5 83 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 H3BMM0 161 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 CRLF1O75462 422 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 TCL1BO95988 128 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 IGHV1-69P01742 117 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 IGHV3-30P01768 117 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 CD7P09564 240 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 CFC1BP0CG36 223 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 CFC1P0CG37 223 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 IGHV3-30-5P0DP03 117 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 NDPQ00604 133 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 EGFEM1PQ0D2K5 195 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 RHOHQ15669 191 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 TMEM170BQ5T4T1 132 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 FAM19A1Q7Z5A9 133 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 VMO1Q7Z5L0 202 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 MRPL55Q7Z7F7 128 aaKnown RBP2.98□□□□□ -1.93
RFC1-208ENST00000504849 FAM223AQ8IWN6 122 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 RNF182Q8N6D2 247 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 Q8N6K4 173 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 POM121L12Q8N7R1 296 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 SLC25A29Q8N8R3 303 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 KIR2DL5BQ8NHK3 375 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 UBE2WQ96B02 151 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 SPANXCQ9NY87 97 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 TP53TG1Q9Y2A0 90 aa2.98□□□□□ -1.93
RFC1-208ENST00000504849 CSMD1Q96PZ7 3565 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 ANKHD1Q8IWZ3 2542 aaKnown RBP2.97□□□□□ -1.93
RFC1-208ENST00000504849 TRBV10-2A0A0K0K1G8 114 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 SDHAF1A6NFY7 115 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 H3BT86 120 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 J3QQQ9 107 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 M0R2P5 195 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 PRB4P10163 310 aaPredicted RBP2.97□□□□□ -1.93
RFC1-208ENST00000504849 UBE2E1P51965 193 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 APOC4P55056 127 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 CXCL6P80162 114 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 KIAA0087Q14695 138 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 CRYBG3Q68DQ2 2970 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 CLEC19AQ6UXS0 136 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 ZFP2Q6ZN57 461 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 Q8N377 158 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 C14orf178Q8N769 122 aaPredicted RBP2.97□□□□□ -1.93
RFC1-208ENST00000504849 Q8N9W7 124 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 DEFB124Q8NES8 71 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 ITLN2Q8WWU7 325 aaPredicted RBP2.97□□□□□ -1.93
RFC1-208ENST00000504849 COPS9Q8WXC6 57 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 UBE2E2Q96LR5 201 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 CARD19Q96LW7 228 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 LINC01600Q96MT4 127 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 SS18L2Q9UHA2 77 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 RAI1Q7Z5J4 1906 aaPredicted RBP2.97□□□□□ -1.93
RFC1-208ENST00000504849 CNTRLQ7Z7A1 2325 aa2.97□□□□□ -1.93
RFC1-208ENST00000504849 SPTBN1Q01082 2364 aaKnown RBP2.96□□□□□ -1.94
RFC1-208ENST00000504849 MED13LQ71F56 2210 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 PKD1L1Q8TDX9 2849 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 IGLV4-69A0A075B6H9 119 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 TRAV2A0A0B4J234 112 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 IGHV3-66A0A0C4DH42 116 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 TRBV6-5A0A0K0K1A5 114 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 TRBV30A0A0K0K1B3 111 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 FAM240AA0A1B0GVK7 77 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms