RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PSORS1C2Q9UIG4 136 aa4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 LPAP08519 4548 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 hCG_2014768A0A024R1R8 64 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 A0A1W2PNN7 141 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 ZNF561-AS1K7EIQ3 104 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 APCSP02743 223 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 TRGC1P0CF51 173 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 IGLC6P0CF74 106 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 FGF6P10767 208 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 NTF3P20783 257 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 PHF5AQ7RTV0 110 aaKnown RBP4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 C9orf62Q8N4C0 152 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 CDIP1Q9H305 208 aa4.2□□□□□ -1.74
NPIPB3-203ENST00000504841 LOC107984640A0A0U1RRK4 108 aa4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 PDE6DO43924 150 aa4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 IFNA1P01562 189 aa4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 RPL35P42766 123 aaKnown RBP4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 CAMPP49913 170 aa4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 RPS20P60866 119 aaKnown RBP4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 BLOC1S1P78537 153 aa4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 RPL18AQ02543 176 aaKnown RBP4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 C9orf116Q5BN46 136 aaPredicted RBP4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 CENPWQ5EE01 88 aa4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 OR5A1Q8NGJ0 315 aa4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 DIRC1Q969H9 104 aa4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 RPL39LQ96EH5 51 aaKnown RBP4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 BTF3L4Q96K17 158 aa4.19□□□□□ -1.74
NPIPB3-203ENST00000504841 IGLV4-69A0A075B6H9 119 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 LINC00959A0A1B0GUT2 108 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 MALP21145 153 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 UBE2D1P51668 147 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 CCL20P78556 96 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 MEF2BQ02080 365 aaPredicted RBP4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 LYZL1Q6UWQ5 148 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 GATD1Q8NB37 220 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 C11orf52Q96A22 123 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 SMIM12Q96EX1 92 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 TMEM101Q96IK0 257 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 CAMK2N2Q96S95 79 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 GNG13Q9P2W3 67 aa4.18□□□□□ -1.74
NPIPB3-203ENST00000504841 A0A087WZ39 114 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 A0A1B0GVG6 124 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 XKRY2A2RUG3 117 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 F2Z2F3 143 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 APOMO95445 188 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 NCR2O95944 276 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 IGLV7-43P04211 117 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 SS18Q15532 418 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 TWIST1Q15672 202 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 ISOC2Q96AB3 205 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 BIN3Q9NQY0 253 aa4.17□□□□□ -1.74
NPIPB3-203ENST00000504841 RAB19A4D1S5 217 aa4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 C19orf71A6NCJ1 209 aa4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 SDHAF1A6NFY7 115 aa4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 H0Y9J4 135 aa4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 H7C423 109 aa4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 ZNF25P17030 456 aaPredicted RBP4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 PMCHP20382 165 aa4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 CD164L2Q6UWJ8 174 aa4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 NUP35Q8NFH5 326 aa4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 OPRPNQ99935 248 aaPredicted RBP4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 MED9Q9NWA0 146 aa4.16□□□□□ -1.74
NPIPB3-203ENST00000504841 IGLV1-50A0A075B6I6 118 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 TMEM250H0YL14 139 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 COX7A2LO14548 114 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 TSPAN13O95857 204 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 CTRLP40313 264 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 GNG4P50150 75 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 RNASE13Q5GAN3 156 aaKnown RBP4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 ALKAL2Q6UX46 152 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 FAM19A5Q7Z5A7 132 aaPredicted RBP4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 KRTAP11-1Q8IUC1 163 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 MRAP2Q96G30 205 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 TMEM242Q9NWH2 141 aa4.15□□□□□ -1.75
NPIPB3-203ENST00000504841 FAM168BA1KXE4 195 aa4.14□□□□□ -1.75
NPIPB3-203ENST00000504841 I3L3M4 83 aa4.14□□□□□ -1.75
NPIPB3-203ENST00000504841 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
NPIPB3-203ENST00000504841 FOXA3P55318 350 aaPredicted RBP4.14□□□□□ -1.75
NPIPB3-203ENST00000504841 SPAG11BQ08648 103 aa4.14□□□□□ -1.75
NPIPB3-203ENST00000504841 SMIM15Q7Z3B0 74 aa4.14□□□□□ -1.75
NPIPB3-203ENST00000504841 C5orf38Q86SI9 138 aa4.14□□□□□ -1.75
NPIPB3-203ENST00000504841 TRAV13-1A0A0B4J241 112 aa4.13□□□□□ -1.75
NPIPB3-203ENST00000504841 TSHBP01222 138 aa4.13□□□□□ -1.75
NPIPB3-203ENST00000504841 RPL13AP40429 203 aaKnown RBP4.13□□□□□ -1.75
NPIPB3-203ENST00000504841 UBE2BP63146 152 aa4.13□□□□□ -1.75
NPIPB3-203ENST00000504841 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
NPIPB3-203ENST00000504841 SMDT1Q9H4I9 107 aa4.13□□□□□ -1.75
NPIPB3-203ENST00000504841 CDC42SE2Q9NRR3 84 aa4.13□□□□□ -1.75
NPIPB3-203ENST00000504841 TRBV20OR9-2A0A075B6H5 130 aa4.12□□□□□ -1.75
NPIPB3-203ENST00000504841 C7orf77A4D0Y5 90 aa4.12□□□□□ -1.75
NPIPB3-203ENST00000504841 ESDP10768 282 aa4.12□□□□□ -1.75
NPIPB3-203ENST00000504841 GAGE2EQ4V326 116 aa4.12□□□□□ -1.75
NPIPB3-203ENST00000504841 TEX261Q6UWH6 196 aa4.12□□□□□ -1.75
NPIPB3-203ENST00000504841 NUDT10Q8NFP7 164 aa4.12□□□□□ -1.75
NPIPB3-203ENST00000504841 OCC1Q8TAD7 63 aa4.12□□□□□ -1.75
NPIPB3-203ENST00000504841 TSKUQ8WUA8 353 aa4.12□□□□□ -1.75
NPIPB3-203ENST00000504841 NUDT11Q96G61 164 aa4.12□□□□□ -1.75
NPIPB3-203ENST00000504841 C2orf48Q96LS8 159 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms