RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 BTF3L4Q96K17 158 aa5.67□□□□□ -1.5
PDGFC-204ENST00000504672 AP1S3Q96PC3 154 aa5.67□□□□□ -1.5
PDGFC-204ENST00000504672 TRBV10-1A0A0K0K1A3 114 aa5.66□□□□□ -1.5
PDGFC-204ENST00000504672 CRPP02741 224 aa5.66□□□□□ -1.5
PDGFC-204ENST00000504672 SLPIP03973 132 aa5.66□□□□□ -1.5
PDGFC-204ENST00000504672 S100A1P23297 94 aa5.66□□□□□ -1.5
PDGFC-204ENST00000504672 RAB4BP61018 213 aa5.66□□□□□ -1.5
PDGFC-204ENST00000504672 RIGQ13278 110 aa5.66□□□□□ -1.5
PDGFC-204ENST00000504672 CIRBPQ14011 172 aaKnown RBP5.66□□□□□ -1.5
PDGFC-204ENST00000504672 CLPSL2Q6UWE3 100 aa5.66□□□□□ -1.5
PDGFC-204ENST00000504672 C7orf33Q8WU49 177 aa5.66□□□□□ -1.5
PDGFC-204ENST00000504672 PGLYRP4Q96LB8 373 aa5.66□□□□□ -1.5
PDGFC-204ENST00000504672 A0A087WWL8 130 aa5.65□□□□□ -1.5
PDGFC-204ENST00000504672 MUC21A0A0G2JKD1 596 aa5.65□□□□□ -1.5
PDGFC-204ENST00000504672 M0QY20 66 aa5.65□□□□□ -1.5
PDGFC-204ENST00000504672 M0R381 172 aa5.65□□□□□ -1.5
PDGFC-204ENST00000504672 ANGP03950 147 aaKnown RBP5.65□□□□□ -1.5
PDGFC-204ENST00000504672 S100A8P05109 93 aa5.65□□□□□ -1.5
PDGFC-204ENST00000504672 HBBP68871 147 aa5.65□□□□□ -1.5
PDGFC-204ENST00000504672 PRR3P79522 188 aaKnown RBP5.65□□□□□ -1.5
PDGFC-204ENST00000504672 COX19Q49B96 90 aa5.65□□□□□ -1.5
PDGFC-204ENST00000504672 FAM104BQ5XKR9 115 aa5.65□□□□□ -1.5
PDGFC-204ENST00000504672 RNF185Q96GF1 192 aa5.65□□□□□ -1.5
PDGFC-204ENST00000504672 IGHV3-64A0A075B6Q5 118 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 TRBV6-5A0A0K0K1A5 114 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 hDV102S1A0JD36 115 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 PRSS47A8MTI9 375 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 RPL32P62910 135 aaKnown RBP5.64□□□□□ -1.51
PDGFC-204ENST00000504672 TWIST1Q15672 202 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 MPV17L2Q567V2 206 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 KRTAP26-1Q6PEX3 210 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 REG3GQ6UW15 175 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 SPACA4Q8TDM5 124 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 GNB1LQ9BYB4 327 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 RPS10P5Q9NQ39 176 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 PLAC8Q9NZF1 115 aa5.64□□□□□ -1.51
PDGFC-204ENST00000504672 IGLV10-54A0A075B6I4 117 aa5.63□□□□□ -1.51
PDGFC-204ENST00000504672 ATP6V1G1O75348 118 aa5.63□□□□□ -1.51
PDGFC-204ENST00000504672 RAB4AP20338 218 aa5.63□□□□□ -1.51
PDGFC-204ENST00000504672 FAM74A4Q5TZK3 123 aa5.63□□□□□ -1.51
PDGFC-204ENST00000504672 TMEM136Q6ZRR5 245 aa5.63□□□□□ -1.51
PDGFC-204ENST00000504672 BORCS7Q96B45 105 aa5.63□□□□□ -1.51
PDGFC-204ENST00000504672 MRAP2Q96G30 205 aa5.63□□□□□ -1.51
PDGFC-204ENST00000504672 CHCHD7Q9BUK0 85 aa5.63□□□□□ -1.51
PDGFC-204ENST00000504672 SMCO4Q9NRQ5 59 aa5.63□□□□□ -1.51
PDGFC-204ENST00000504672 IGKV2-24A0A0C4DH68 120 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 MUC21A0A140T8X8 626 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 PPBPP02775 128 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 MT-ND6P03923 174 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 S100PP25815 95 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 CNBPP62633 177 aaKnown RBP5.62□□□□□ -1.51
PDGFC-204ENST00000504672 COX6A2Q02221 97 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 MAJINQ3KP22 176 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 LINC00269Q8N2A0 174 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 CHCHD5Q9BSY4 110 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 TPPP3Q9BW30 176 aa5.62□□□□□ -1.51
PDGFC-204ENST00000504672 TRBV6-8A0A0A6YYG3 113 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 COLCA2A8K830 154 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 H7C1H1 209 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 PPP1R17O96001 155 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 SMIM17P0DL12 118 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 POLR2KP53803 58 aaKnown RBP5.61□□□□□ -1.51
PDGFC-204ENST00000504672 UBE2D3P61077 147 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 UBE2D2P62837 147 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 SRSF9Q13242 221 aaKnown RBP eCLIP5.61□□□□□ -1.51
PDGFC-204ENST00000504672 MIAQ16674 131 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 MRPL51Q4U2R6 128 aaKnown RBP5.61□□□□□ -1.51
PDGFC-204ENST00000504672 SUMO4Q6EEV6 95 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 SMIM15Q7Z3B0 74 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 NRACQ8N912 160 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 NEXN-AS1Q8NBZ9 246 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 NIT2Q9NQR4 276 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 LAMTOR2Q9Y2Q5 125 aa5.61□□□□□ -1.51
PDGFC-204ENST00000504672 TRBV7-3A0A075B6L6 115 aa5.6□□□□□ -1.51
PDGFC-204ENST00000504672 GAGE6Q13070 117 aa5.6□□□□□ -1.51
PDGFC-204ENST00000504672 MRPL54Q6P161 138 aaKnown RBP5.6□□□□□ -1.51
PDGFC-204ENST00000504672 AMN1Q8IY45 258 aa5.6□□□□□ -1.51
PDGFC-204ENST00000504672 STPG4Q8N801 248 aa5.6□□□□□ -1.51
PDGFC-204ENST00000504672 PRSS3P2Q8NHM4 247 aa5.6□□□□□ -1.51
PDGFC-204ENST00000504672 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.59□□□□□ -1.51
PDGFC-204ENST00000504672 TGIF2-C20orf24A0A0A6YYL0 155 aa5.59□□□□□ -1.51
PDGFC-204ENST00000504672 TRBV27A0A0K0K1C4 114 aa5.59□□□□□ -1.51
PDGFC-204ENST00000504672 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
PDGFC-204ENST00000504672 CAMPP49913 170 aa5.59□□□□□ -1.51
PDGFC-204ENST00000504672 RBX1P62877 108 aa5.59□□□□□ -1.51
PDGFC-204ENST00000504672 RPL36AP83881 106 aaKnown RBP5.59□□□□□ -1.51
PDGFC-204ENST00000504672 CBLN2Q8IUK8 224 aa5.59□□□□□ -1.51
PDGFC-204ENST00000504672 RPL36ALQ969Q0 106 aaKnown RBP5.59□□□□□ -1.51
PDGFC-204ENST00000504672 C20orf78Q9BR46 151 aa5.59□□□□□ -1.51
PDGFC-204ENST00000504672 LINC01546A6NGU7 62 aa5.58□□□□□ -1.52
PDGFC-204ENST00000504672 ZNF56Q15929 161 aa5.58□□□□□ -1.52
PDGFC-204ENST00000504672 PRR34Q9NV39 138 aa5.58□□□□□ -1.52
PDGFC-204ENST00000504672 NCR2O95944 276 aa5.57□□□□□ -1.52
PDGFC-204ENST00000504672 RPS10P46783 165 aaKnown RBP5.57□□□□□ -1.52
PDGFC-204ENST00000504672 PRR4Q16378 134 aa5.57□□□□□ -1.52
PDGFC-204ENST00000504672 TMEM97Q5BJF2 176 aa5.57□□□□□ -1.52
PDGFC-204ENST00000504672 NTM-AS1Q6ZSK4 140 aa5.57□□□□□ -1.52
PDGFC-204ENST00000504672 ORMDL3Q8N138 153 aa5.57□□□□□ -1.52
PDGFC-204ENST00000504672 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms