RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 GTSF1LQ9H1H1 148 aa4.24□□□□□ -1.73
COL4A5-207ENST00000504541 HHLA3Q9XRX5 114 aa4.24□□□□□ -1.73
COL4A5-207ENST00000504541 TRAV26-1A0A087WT03 109 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 IGLV9-49A0A0B4J1Y8 123 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 TRGV4A0A0C4DH28 118 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 SMKR1H3BMG3 65 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 H7C423 109 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 K7EQD1 137 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 SERF1AO75920 110 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 GAS8-AS1O95177 125 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 DEFB130BP0DP73 79 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 DEFB130AP0DP74 79 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 CRYBA4P53673 196 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 EMP1P54849 157 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 SMAGPQ0VAQ4 97 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 SPATA12Q7Z6I5 190 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 SLC25A29Q8N8R3 303 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 MRAPQ8TCY5 172 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 HSPB8Q9UJY1 196 aa4.23□□□□□ -1.73
COL4A5-207ENST00000504541 TRAV26-2A0A0B4J265 109 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 LOC389332A0A1B0GUA5 103 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 LOC105371267A0A1B0GV96 52 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 NUPR1O60356 82 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 UBE2D3P61077 147 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 UBE2D2P62837 147 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 C12orf74Q32Q52 190 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 C11orf45Q8TAV5 145 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 RPL39LQ96EH5 51 aaKnown RBP4.22□□□□□ -1.73
COL4A5-207ENST00000504541 HIST1H2BLQ99880 126 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 PYGO1Q9Y3Y4 419 aa4.22□□□□□ -1.73
COL4A5-207ENST00000504541 IGHV3-73A0A0B4J1V6 119 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 ATP5LO75964 103 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 LEPROTL1O95214 131 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 HBDP02042 147 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 LINC00694P0DN24 101 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 COTL1Q14019 142 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 MRPL23Q16540 153 aaKnown RBP4.21□□□□□ -1.74
COL4A5-207ENST00000504541 IQCJQ1A5X6 159 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 PDZD11Q5EBL8 140 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 RNASEKQ6P5S7 137 aaKnown RBP4.21□□□□□ -1.74
COL4A5-207ENST00000504541 ZNRF2Q8NHG8 242 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 TOMM6Q96B49 74 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 TMEM141Q96I45 108 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 TIMM21Q9BVV7 248 aa4.21□□□□□ -1.74
COL4A5-207ENST00000504541 CSDC2Q9Y534 153 aaKnown RBP4.21□□□□□ -1.74
COL4A5-207ENST00000504541 A0A0J9YWU9 116 aa4.2□□□□□ -1.74
COL4A5-207ENST00000504541 PRB2P02812 416 aaPredicted RBP4.2□□□□□ -1.74
COL4A5-207ENST00000504541 PKIAP61925 76 aa4.2□□□□□ -1.74
COL4A5-207ENST00000504541 C20orf203Q8NBC4 194 aa4.2□□□□□ -1.74
COL4A5-207ENST00000504541 TIMM17AQ99595 171 aa4.2□□□□□ -1.74
COL4A5-207ENST00000504541 CYSLTR1Q9Y271 337 aa4.2□□□□□ -1.74
COL4A5-207ENST00000504541 ANK2Q01484 3957 aa4.2□□□□□ -1.74
COL4A5-207ENST00000504541 A0A096LNJ9 63 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 TRAV10A0A0B4J240 114 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 IGHV1-24A0A0C4DH33 117 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 IGIPA6NJ69 53 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 F5H768 121 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.19□□□□□ -1.74
COL4A5-207ENST00000504541 DEFB4AO15263 64 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 P0DMU3 169 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 FAM231AP0DMU4 169 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 FAM231CP0DMU5 169 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 FABP4P15090 132 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 TCTAP57738 103 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 DEFA6Q01524 100 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 JOSD1Q15040 202 aaPredicted RBP4.19□□□□□ -1.74
COL4A5-207ENST00000504541 C2orf66Q6UXQ4 117 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 NEGR1Q7Z3B1 354 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 MRPL52Q86TS9 123 aaKnown RBP4.19□□□□□ -1.74
COL4A5-207ENST00000504541 FAM19A2Q8N3H0 131 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 MAPKAPK5-AS1Q8N8E1 139 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 ATP6V0E2Q8NHE4 81 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 VSIG2Q96IQ7 327 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 LITAFQ99732 161 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 MAP1LC3CQ9BXW4 147 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 CELA1Q9UNI1 258 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 NOTCH1P46531 2555 aa4.19□□□□□ -1.74
COL4A5-207ENST00000504541 PKD1L1Q8TDX9 2849 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 NBEAL1Q6ZS30 2694 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 TRBV25-1A0A075B6N4 114 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 DEFB131BA0A096LNP1 70 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 TRBV6-8A0A0A6YYG3 113 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 TRAV12-1A0A0B4J245 112 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 ZNF25P17030 456 aaPredicted RBP4.18□□□□□ -1.74
COL4A5-207ENST00000504541 MRPS36P82909 103 aaKnown RBP4.18□□□□□ -1.74
COL4A5-207ENST00000504541 PMCHL1Q16048 86 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 C15orf53Q8NAA6 179 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 OR10D4PQ8NGN7 298 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 IFI27L1Q96BM0 104 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 SCGB3A1Q96QR1 104 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 CHCHD7Q9BUK0 85 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 RETNQ9HD89 108 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 SPANXA1Q9NS26 97 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 Q9UF83 564 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 ICOSQ9Y6W8 199 aa4.18□□□□□ -1.74
COL4A5-207ENST00000504541 PCP4L1A6NKN8 68 aa4.17□□□□□ -1.74
COL4A5-207ENST00000504541 SYS1-DBNDD2H3BUS1 97 aa4.17□□□□□ -1.74
COL4A5-207ENST00000504541 CCL25O15444 150 aa4.17□□□□□ -1.74
COL4A5-207ENST00000504541 LGALS9CQ6DKI2 356 aa4.17□□□□□ -1.74
COL4A5-207ENST00000504541 NTM-AS1Q6ZSK4 140 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms