RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 Q9HAA7 133 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 PRR34Q9NV39 138 aa7.97□□□□□ -1.13
PDLIM5-208ENST00000504489 SMAGPQ0VAQ4 97 aa7.96□□□□□ -1.14
PDLIM5-208ENST00000504489 LINC00269Q8N2A0 174 aa7.96□□□□□ -1.14
PDLIM5-208ENST00000504489 TMEM18Q96B42 140 aa7.96□□□□□ -1.14
PDLIM5-208ENST00000504489 RMI2Q96E14 147 aa7.96□□□□□ -1.14
PDLIM5-208ENST00000504489 TM2D2Q9BX73 214 aa7.96□□□□□ -1.14
PDLIM5-208ENST00000504489 CRPP02741 224 aa7.95□□□□□ -1.14
PDLIM5-208ENST00000504489 MIAQ16674 131 aa7.95□□□□□ -1.14
PDLIM5-208ENST00000504489 RNASEKQ6P5S7 137 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-208ENST00000504489 TIMM21Q9BVV7 248 aa7.95□□□□□ -1.14
PDLIM5-208ENST00000504489 CSDC2Q9Y534 153 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-208ENST00000504489 COX11Q9Y6N1 276 aa7.95□□□□□ -1.14
PDLIM5-208ENST00000504489 IFI27P40305 119 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-208ENST00000504489 REG3AQ06141 175 aa7.94□□□□□ -1.14
PDLIM5-208ENST00000504489 TMEM101Q96IK0 257 aa7.94□□□□□ -1.14
PDLIM5-208ENST00000504489 UBE2D4Q9Y2X8 147 aa7.94□□□□□ -1.14
PDLIM5-208ENST00000504489 FAT2Q9NYQ8 4349 aa7.94□□□□□ -1.14
PDLIM5-208ENST00000504489 TRAV8-4A0A0B4J246 113 aa7.93□□□□□ -1.14
PDLIM5-208ENST00000504489 COLCA2A8K830 154 aa7.93□□□□□ -1.14
PDLIM5-208ENST00000504489 ORMDL2Q53FV1 153 aa7.93□□□□□ -1.14
PDLIM5-208ENST00000504489 OR5A1Q8NGJ0 315 aa7.93□□□□□ -1.14
PDLIM5-208ENST00000504489 PRSS3P2Q8NHM4 247 aa7.93□□□□□ -1.14
PDLIM5-208ENST00000504489 IGKV2D-24A0A075B6R9 120 aa7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 A0A1B0GVY2 172 aa7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 LINC01546A6NGU7 62 aa7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 PSCAO43653 123 aa7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 S100A1P23297 94 aa7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 RPL39P62891 51 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 DGAT2L7PQ6IED9 249 aa7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 CLPSL2Q6UWE3 100 aa7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 C1orf43Q9BWL3 253 aa7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 CDC42SE2Q9NRR3 84 aa7.92□□□□□ -1.14
PDLIM5-208ENST00000504489 SCO1O75880 301 aa7.91□□□□□ -1.14
PDLIM5-208ENST00000504489 G0S2P27469 103 aa7.91□□□□□ -1.14
PDLIM5-208ENST00000504489 ZNF664Q8N3J9 261 aa7.91□□□□□ -1.14
PDLIM5-208ENST00000504489 C18orf32Q8TCD1 76 aa7.91□□□□□ -1.14
PDLIM5-208ENST00000504489 SPANXA1Q9NS26 97 aa7.91□□□□□ -1.14
PDLIM5-208ENST00000504489 A0A087WTM6 91 aa7.9□□□□□ -1.14
PDLIM5-208ENST00000504489 LRCOL1A6NCL2 159 aa7.9□□□□□ -1.14
PDLIM5-208ENST00000504489 MRPS36P82909 103 aaKnown RBP7.9□□□□□ -1.14
PDLIM5-208ENST00000504489 KRTAP26-1Q6PEX3 210 aa7.9□□□□□ -1.14
PDLIM5-208ENST00000504489 MAPKAPK5-AS1Q8N8E1 139 aa7.9□□□□□ -1.14
PDLIM5-208ENST00000504489 KRTAP9-9Q9BYP9 154 aa7.9□□□□□ -1.14
PDLIM5-208ENST00000504489 KRTAP9-4Q9BYQ2 154 aa7.9□□□□□ -1.14
PDLIM5-208ENST00000504489 CYSLTR1Q9Y271 337 aa7.9□□□□□ -1.14
PDLIM5-208ENST00000504489 PYGO1Q9Y3Y4 419 aa7.9□□□□□ -1.14
PDLIM5-208ENST00000504489 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
PDLIM5-208ENST00000504489 TRGC2P03986 189 aa7.89□□□□□ -1.15
PDLIM5-208ENST00000504489 C2orf66Q6UXQ4 117 aa7.89□□□□□ -1.15
PDLIM5-208ENST00000504489 FA2HQ7L5A8 372 aa7.89□□□□□ -1.15
PDLIM5-208ENST00000504489 FAM104AQ969W3 186 aa7.89□□□□□ -1.15
PDLIM5-208ENST00000504489 PKD1P98161 4303 aa7.89□□□□□ -1.15
PDLIM5-208ENST00000504489 IGLV10-54A0A075B6I4 117 aa7.88□□□□□ -1.15
PDLIM5-208ENST00000504489 CCL25O15444 150 aa7.88□□□□□ -1.15
PDLIM5-208ENST00000504489 LINC00614P0C842 121 aa7.88□□□□□ -1.15
PDLIM5-208ENST00000504489 Q6ZUT4 128 aa7.88□□□□□ -1.15
PDLIM5-208ENST00000504489 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-208ENST00000504489 IGKV3OR2-268A0A0C4DH90 116 aa7.87□□□□□ -1.15
PDLIM5-208ENST00000504489 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
PDLIM5-208ENST00000504489 LINC01549A6NIU2 74 aa7.87□□□□□ -1.15
PDLIM5-208ENST00000504489 NPSP0C0P6 89 aa7.87□□□□□ -1.15
PDLIM5-208ENST00000504489 RAB5BP61020 215 aa7.87□□□□□ -1.15
PDLIM5-208ENST00000504489 BAALCQ8WXS3 180 aa7.87□□□□□ -1.15
PDLIM5-208ENST00000504489 TOMM6Q96B49 74 aa7.87□□□□□ -1.15
PDLIM5-208ENST00000504489 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
PDLIM5-208ENST00000504489 AP5S1Q9NUS5 200 aa7.87□□□□□ -1.15
PDLIM5-208ENST00000504489 IGLV4-3A0A075B6K6 122 aa7.86□□□□□ -1.15
PDLIM5-208ENST00000504489 IGIPA6NJ69 53 aa7.86□□□□□ -1.15
PDLIM5-208ENST00000504489 SS18Q15532 418 aa7.86□□□□□ -1.15
PDLIM5-208ENST00000504489 RNASE13Q5GAN3 156 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-208ENST00000504489 CHCHD10Q8WYQ3 142 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-208ENST00000504489 OPRPNQ99935 248 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-208ENST00000504489 C1orf196B1AJZ1 125 aa7.85□□□□□ -1.15
PDLIM5-208ENST00000504489 WFDC2Q14508 124 aa7.85□□□□□ -1.15
PDLIM5-208ENST00000504489 ERASQ7Z444 233 aa7.85□□□□□ -1.15
PDLIM5-208ENST00000504489 TMEM141Q96I45 108 aa7.85□□□□□ -1.15
PDLIM5-208ENST00000504489 TIMM17AQ99595 171 aa7.85□□□□□ -1.15
PDLIM5-208ENST00000504489 GAGE12HA6NDE8 117 aa7.84□□□□□ -1.15
PDLIM5-208ENST00000504489 SPATA12Q7Z6I5 190 aa7.84□□□□□ -1.15
PDLIM5-208ENST00000504489 Q8N814 137 aa7.84□□□□□ -1.15
PDLIM5-208ENST00000504489 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-208ENST00000504489 DNAH11Q96DT5 4516 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 PKHD1P08F94 4074 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 TRAV13-1A0A0B4J241 112 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 LECT2O14960 151 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 KRTAP10-2P60368 255 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 FOXI1Q12951 378 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 C14orf177Q52M58 125 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 PAPPA-AS1Q5QFB9 102 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 CD164L2Q6UWJ8 174 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 Q6ZN92 141 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 SCGB3A1Q96QR1 104 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 AMELXQ99217 191 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 HECTD4Q9Y4D8 3996 aa7.83□□□□□ -1.16
PDLIM5-208ENST00000504489 A0A096LNJ9 63 aa7.82□□□□□ -1.16
PDLIM5-208ENST00000504489 IFITM10A6NMD0 228 aa7.82□□□□□ -1.16
PDLIM5-208ENST00000504489 USP17L23D6RBM5 183 aa7.82□□□□□ -1.16
PDLIM5-208ENST00000504489 H3BS24 57 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms