RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 IMMP2LQ96T52 175 aa7.09□□□□□ -1.27
LSM6-204ENST00000504181 NUDT15Q9NV35 164 aa7.09□□□□□ -1.27
LSM6-204ENST00000504181 M0R2T5 61 aa7.08□□□□□ -1.28
LSM6-204ENST00000504181 SPAG11BQ08648 103 aa7.08□□□□□ -1.28
LSM6-204ENST00000504181 CTDSP1Q9GZU7 261 aa7.08□□□□□ -1.28
LSM6-204ENST00000504181 FAM74A7A6NL05 159 aa7.07□□□□□ -1.28
LSM6-204ENST00000504181 OR2D3Q8NGH3 330 aa7.07□□□□□ -1.28
LSM6-204ENST00000504181 TPPP3Q9BW30 176 aa7.07□□□□□ -1.28
LSM6-204ENST00000504181 MRPL35Q9NZE8 188 aaKnown RBP7.07□□□□□ -1.28
LSM6-204ENST00000504181 NUPR1O60356 82 aa7.06□□□□□ -1.28
LSM6-204ENST00000504181 NCR2O95944 276 aa7.06□□□□□ -1.28
LSM6-204ENST00000504181 FP248Q71RG6 208 aaPredicted RBP7.06□□□□□ -1.28
LSM6-204ENST00000504181 G3V3Q6 166 aa7.05□□□□□ -1.28
LSM6-204ENST00000504181 TLX1NBP0CAT3 122 aa7.05□□□□□ -1.28
LSM6-204ENST00000504181 RPL28P46779 137 aaKnown RBP7.05□□□□□ -1.28
LSM6-204ENST00000504181 DEFA1P59665 94 aa7.05□□□□□ -1.28
LSM6-204ENST00000504181 C10orf25Q5T742 122 aa7.05□□□□□ -1.28
LSM6-204ENST00000504181 C5orf38Q86SI9 138 aa7.05□□□□□ -1.28
LSM6-204ENST00000504181 ACTR3CQ9C0K3 210 aaPredicted RBP7.05□□□□□ -1.28
LSM6-204ENST00000504181 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
LSM6-204ENST00000504181 NOL3O60936 208 aaKnown RBP7.04□□□□□ -1.28
LSM6-204ENST00000504181 AKR1C3P42330 323 aa7.04□□□□□ -1.28
LSM6-204ENST00000504181 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
LSM6-204ENST00000504181 CDC42SE2Q9NRR3 84 aa7.04□□□□□ -1.28
LSM6-204ENST00000504181 PLA2G10O15496 165 aa7.03□□□□□ -1.28
LSM6-204ENST00000504181 LYRM1O43325 122 aa7.03□□□□□ -1.28
LSM6-204ENST00000504181 IL7P13232 177 aa7.03□□□□□ -1.28
LSM6-204ENST00000504181 ATP6V0CP27449 155 aa7.03□□□□□ -1.28
LSM6-204ENST00000504181 CTAG1AP78358 180 aa7.03□□□□□ -1.28
LSM6-204ENST00000504181 PPP1R1CQ8WVI7 109 aa7.03□□□□□ -1.28
LSM6-204ENST00000504181 NKX6-2Q9C056 277 aaPredicted RBP7.03□□□□□ -1.28
LSM6-204ENST00000504181 C6orf48Q9UBA6 75 aa7.03□□□□□ -1.28
LSM6-204ENST00000504181 FLGP20930 4061 aaPredicted RBP7.02□□□□□ -1.29
LSM6-204ENST00000504181 IGKV2D-26A0A0A0MRZ7 120 aa7.02□□□□□ -1.29
LSM6-204ENST00000504181 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
LSM6-204ENST00000504181 CCDC160A6NGH7 325 aa7.02□□□□□ -1.29
LSM6-204ENST00000504181 C1orf196B1AJZ1 125 aa7.02□□□□□ -1.29
LSM6-204ENST00000504181 NDUFA1O15239 70 aa7.02□□□□□ -1.29
LSM6-204ENST00000504181 MBP02144 154 aa7.02□□□□□ -1.29
LSM6-204ENST00000504181 GATD1Q8NB37 220 aa7.02□□□□□ -1.29
LSM6-204ENST00000504181 RPL39LQ96EH5 51 aaKnown RBP7.02□□□□□ -1.29
LSM6-204ENST00000504181 ALG5Q9Y673 324 aa7.02□□□□□ -1.29
LSM6-204ENST00000504181 TRGC1P0CF51 173 aa7.01□□□□□ -1.29
LSM6-204ENST00000504181 ZNF726P1Q15940 193 aa7.01□□□□□ -1.29
LSM6-204ENST00000504181 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
LSM6-204ENST00000504181 C9orf129Q5T035 196 aaKnown RBP7.01□□□□□ -1.29
LSM6-204ENST00000504181 UNQ6190/PRO20217Q6UXQ8 127 aa7.01□□□□□ -1.29
LSM6-204ENST00000504181 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
LSM6-204ENST00000504181 ORAOV1Q8WV07 137 aa7.01□□□□□ -1.29
LSM6-204ENST00000504181 PSMG3Q9BT73 122 aaPredicted RBP7.01□□□□□ -1.29
LSM6-204ENST00000504181 H3BS24 57 aa7□□□□□ -1.29
LSM6-204ENST00000504181 MPC2O95563 127 aa7□□□□□ -1.29
LSM6-204ENST00000504181 IGLC6P0CF74 106 aa7□□□□□ -1.29
LSM6-204ENST00000504181 CTRLP40313 264 aa7□□□□□ -1.29
LSM6-204ENST00000504181 RNASE13Q5GAN3 156 aaKnown RBP7□□□□□ -1.29
LSM6-204ENST00000504181 STOML3Q8TAV4 291 aa7□□□□□ -1.29
LSM6-204ENST00000504181 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
LSM6-204ENST00000504181 SDHAF1A6NFY7 115 aa6.99□□□□□ -1.29
LSM6-204ENST00000504181 INMT-MINDY4F8WBC2 141 aa6.99□□□□□ -1.29
LSM6-204ENST00000504181 BCE1O60756 84 aa6.99□□□□□ -1.29
LSM6-204ENST00000504181 TRAV13-1A0A0B4J241 112 aa6.98□□□□□ -1.29
LSM6-204ENST00000504181 PET100P0DJ07 73 aa6.98□□□□□ -1.29
LSM6-204ENST00000504181 PMCHP20382 165 aa6.98□□□□□ -1.29
LSM6-204ENST00000504181 SERF2P84101 59 aa6.98□□□□□ -1.29
LSM6-204ENST00000504181 TMEM241Q24JQ0 296 aa6.98□□□□□ -1.29
LSM6-204ENST00000504181 CST9LP1Q5W188 147 aa6.98□□□□□ -1.29
LSM6-204ENST00000504181 MZT2BQ6NZ67 158 aa6.98□□□□□ -1.29
LSM6-204ENST00000504181 MRPL52Q86TS9 123 aaKnown RBP6.98□□□□□ -1.29
LSM6-204ENST00000504181 MRAP2Q96G30 205 aa6.98□□□□□ -1.29
LSM6-204ENST00000504181 TNFSF18Q9UNG2 199 aa6.98□□□□□ -1.29
LSM6-204ENST00000504181 CTXND1A0A1B0GTU2 59 aa6.97□□□□□ -1.29
LSM6-204ENST00000504181 F8WDY8 70 aa6.97□□□□□ -1.29
LSM6-204ENST00000504181 H2BFSP57053 126 aa6.97□□□□□ -1.29
LSM6-204ENST00000504181 BAGE2Q86Y30 109 aa6.97□□□□□ -1.29
LSM6-204ENST00000504181 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
LSM6-204ENST00000504181 A0A1B0GVG6 124 aa6.96□□□□□ -1.3
LSM6-204ENST00000504181 I3L3M4 83 aa6.96□□□□□ -1.3
LSM6-204ENST00000504181 C3orf22Q8N5N4 141 aa6.96□□□□□ -1.3
LSM6-204ENST00000504181 UBE2D4Q9Y2X8 147 aa6.96□□□□□ -1.3
LSM6-204ENST00000504181 LYZL1Q6UWQ5 148 aa6.95□□□□□ -1.3
LSM6-204ENST00000504181 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
LSM6-204ENST00000504181 TMEM242Q9NWH2 141 aa6.95□□□□□ -1.3
LSM6-204ENST00000504181 KRTAP4-16G5E9R7 235 aaPredicted RBP6.94□□□□□ -1.3
LSM6-204ENST00000504181 LBHQ53QV2 105 aaPredicted RBP6.94□□□□□ -1.3
LSM6-204ENST00000504181 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
LSM6-204ENST00000504181 S100A9P06702 114 aaKnown RBP6.93□□□□□ -1.3
LSM6-204ENST00000504181 FHITP49789 147 aa6.93□□□□□ -1.3
LSM6-204ENST00000504181 DAND5Q8N907 189 aa6.93□□□□□ -1.3
LSM6-204ENST00000504181 MACF1Q9UPN3 7388 aaKnown RBP6.92□□□□□ -1.3
LSM6-204ENST00000504181 F2Z2F3 143 aa6.92□□□□□ -1.3
LSM6-204ENST00000504181 RPS20P60866 119 aaKnown RBP6.92□□□□□ -1.3
LSM6-204ENST00000504181 SPAG11AQ6PDA7 123 aa6.92□□□□□ -1.3
LSM6-204ENST00000504181 CCDC32Q9BV29 185 aa6.92□□□□□ -1.3
LSM6-204ENST00000504181 RNASE7Q9H1E1 156 aaKnown RBP6.92□□□□□ -1.3
LSM6-204ENST00000504181 IGLV8-61A0A075B6I0 122 aa6.91□□□□□ -1.3
LSM6-204ENST00000504181 FAM240BA0A1B0GVZ2 78 aa6.91□□□□□ -1.3
LSM6-204ENST00000504181 C7orf77A4D0Y5 90 aa6.91□□□□□ -1.3
LSM6-204ENST00000504181 UBE2AP49459 152 aa6.91□□□□□ -1.3
LSM6-204ENST00000504181 TWIST1Q15672 202 aa6.91□□□□□ -1.3
LSM6-204ENST00000504181 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms