RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ZNF843Q8N446 348 aa12.23□□□□□ -0.45
PCDHA1-203ENST00000504120 LINC00482Q8N8I6 264 aa12.23□□□□□ -0.45
PCDHA1-203ENST00000504120 FAM110AQ9BQ89 295 aa12.23□□□□□ -0.45
PCDHA1-203ENST00000504120 TRIAP1O43715 76 aa12.22□□□□□ -0.45
PCDHA1-203ENST00000504120 PIK3CD-AS1Q5SR53 167 aa12.22□□□□□ -0.45
PCDHA1-203ENST00000504120 WNK1Q9H4A3 2382 aa12.22□□□□□ -0.45
PCDHA1-203ENST00000504120 C11orf21Q9P2W6 132 aa12.22□□□□□ -0.45
PCDHA1-203ENST00000504120 PRR9Q5T870 116 aa12.21□□□□□ -0.45
PCDHA1-203ENST00000504120 CACNA1AO00555 2505 aa12.21□□□□□ -0.46
PCDHA1-203ENST00000504120 PRB2P02812 416 aaPredicted RBP12.21□□□□□ -0.46
PCDHA1-203ENST00000504120 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.46
PCDHA1-203ENST00000504120 Q8N976 141 aa12.2□□□□□ -0.46
PCDHA1-203ENST00000504120 C9orf85Q96MD7 179 aa12.2□□□□□ -0.46
PCDHA1-203ENST00000504120 NDUFC2O95298 119 aa12.2□□□□□ -0.46
PCDHA1-203ENST00000504120 TRAV23DV6A0A075B6W5 121 aa12.2□□□□□ -0.46
PCDHA1-203ENST00000504120 RBX1P62877 108 aa12.19□□□□□ -0.46
PCDHA1-203ENST00000504120 LINC01006Q8NI28 216 aa12.19□□□□□ -0.46
PCDHA1-203ENST00000504120 POLR2KP53803 58 aaKnown RBP12.19□□□□□ -0.46
PCDHA1-203ENST00000504120 BBC3Q96PG8 261 aaPredicted RBP12.19□□□□□ -0.46
PCDHA1-203ENST00000504120 FAM19A1Q7Z5A9 133 aa12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 SYCNQ0VAF6 134 aa12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 DCANP1Q8TF63 244 aa12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 ATRXP46100 2492 aa12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 CD164L2Q6UWJ8 174 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 PIEZO1Q92508 2521 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 MT-ATP8P03928 68 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 NDUFV3P56181 108 aaKnown RBP12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 PRR14LQ5THK1 2151 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 DSCAMO60469 2012 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 SLPIP03973 132 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 CNFNQ9BYD5 112 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 XAGE1AQ9HD64 81 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 RNF183Q96D59 192 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 KIR2DL5BQ8NHK3 375 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
PCDHA1-203ENST00000504120 C6orf99Q4VX62 202 aa12.16□□□□□ -0.46
PCDHA1-203ENST00000504120 LY6G6DO95868 133 aa12.15□□□□□ -0.46
PCDHA1-203ENST00000504120 DSCAML1Q8TD84 2053 aa12.15□□□□□ -0.46
PCDHA1-203ENST00000504120 TRAV10A0A0B4J240 114 aa12.15□□□□□ -0.46
PCDHA1-203ENST00000504120 Q6ZS46 218 aa12.15□□□□□ -0.47
PCDHA1-203ENST00000504120 C2orf91Q6ZV80 131 aa12.15□□□□□ -0.47
PCDHA1-203ENST00000504120 A0A087WZ39 114 aa12.14□□□□□ -0.47
PCDHA1-203ENST00000504120 UQCRQO14949 82 aa12.14□□□□□ -0.47
PCDHA1-203ENST00000504120 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
PCDHA1-203ENST00000504120 MRGPRG-AS1Q2M3A8 158 aa12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 A8MZ25 164 aa12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 SONP18583 2426 aaKnown RBP12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 LELP1Q5T871 98 aa12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 LINC00959A0A1B0GUT2 108 aa12.12□□□□□ -0.47
PCDHA1-203ENST00000504120 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
PCDHA1-203ENST00000504120 UBE2D1P51668 147 aa12.12□□□□□ -0.47
PCDHA1-203ENST00000504120 FAM19A5Q7Z5A7 132 aaPredicted RBP12.12□□□□□ -0.47
PCDHA1-203ENST00000504120 IGKV4-1P06312 121 aa12.11□□□□□ -0.47
PCDHA1-203ENST00000504120 ENHOQ6UWT2 76 aa12.11□□□□□ -0.47
PCDHA1-203ENST00000504120 C20orf197Q8N268 126 aa12.11□□□□□ -0.47
PCDHA1-203ENST00000504120 MRPS12O15235 138 aaKnown RBP12.1□□□□□ -0.47
PCDHA1-203ENST00000504120 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
PCDHA1-203ENST00000504120 WFDC10AQ9H1F0 79 aa12.1□□□□□ -0.47
PCDHA1-203ENST00000504120 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
PCDHA1-203ENST00000504120 A0A096LNI7 61 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 KPRPQ5T749 579 aaPredicted RBP12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 NAV2Q8IVL1 2488 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 CDSNQ15517 529 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 M0R378 163 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 LST1O00453 97 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 NAV3Q8IVL0 2385 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 UBE2D3P61077 147 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 UBE2D2P62837 147 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 CCKP06307 115 aa12.08□□□□□ -0.48
PCDHA1-203ENST00000504120 COX17Q14061 63 aa12.08□□□□□ -0.48
PCDHA1-203ENST00000504120 SORL1Q92673 2214 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 SCXQ7RTU7 201 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 SRCAPQ6ZRS2 3230 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 IGLV4-69A0A075B6H9 119 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 MUC7Q8TAX7 377 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 SEC61GP60059 68 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 CRIP2P52943 208 aaPredicted RBP12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 DHRS4-AS1Q9P1J3 65 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 NCOR2Q9Y618 2525 aa12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 IGIPA6NJ69 53 aa12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 CDC42SE2Q9NRR3 84 aa12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 AVPP01185 164 aa12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 PRM2P04554 102 aa12.05□□□□□ -0.48
PCDHA1-203ENST00000504120 Q6ZQY7 126 aa12.05□□□□□ -0.48
PCDHA1-203ENST00000504120 IGF2RP11717 2491 aa12.05□□□□□ -0.48
PCDHA1-203ENST00000504120 C3orf22Q8N5N4 141 aa12.05□□□□□ -0.48
PCDHA1-203ENST00000504120 Q8IZM0 81 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 C1orf158Q8N1D5 194 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 CLUHP3Q96NS8 147 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 SMIM11BQ8TCY0 68 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 IMUPQ9GZP8 106 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 FAM236DA0A1B0GTK5 79 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 FAM236CP0DP71 79 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 PLXNB1O43157 2135 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms