RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ZNF843Q8N446 348 aa12.23□□□□□ -0.45
PCDHA1-203ENST00000504120 LINC00482Q8N8I6 264 aa12.23□□□□□ -0.45
PCDHA1-203ENST00000504120 FAM110AQ9BQ89 295 aa12.23□□□□□ -0.45
PCDHA1-203ENST00000504120 TRIAP1O43715 76 aa12.22□□□□□ -0.45
PCDHA1-203ENST00000504120 PIK3CD-AS1Q5SR53 167 aa12.22□□□□□ -0.45
PCDHA1-203ENST00000504120 WNK1Q9H4A3 2382 aa12.22□□□□□ -0.45
PCDHA1-203ENST00000504120 C11orf21Q9P2W6 132 aa12.22□□□□□ -0.45
PCDHA1-203ENST00000504120 PRR9Q5T870 116 aa12.21□□□□□ -0.45
PCDHA1-203ENST00000504120 CACNA1AO00555 2505 aa12.21□□□□□ -0.46
PCDHA1-203ENST00000504120 PRB2P02812 416 aaPredicted RBP12.21□□□□□ -0.46
PCDHA1-203ENST00000504120 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.46
PCDHA1-203ENST00000504120 Q8N976 141 aa12.2□□□□□ -0.46
PCDHA1-203ENST00000504120 C9orf85Q96MD7 179 aa12.2□□□□□ -0.46
PCDHA1-203ENST00000504120 NDUFC2O95298 119 aa12.2□□□□□ -0.46
PCDHA1-203ENST00000504120 TRAV23DV6A0A075B6W5 121 aa12.2□□□□□ -0.46
PCDHA1-203ENST00000504120 RBX1P62877 108 aa12.19□□□□□ -0.46
PCDHA1-203ENST00000504120 LINC01006Q8NI28 216 aa12.19□□□□□ -0.46
PCDHA1-203ENST00000504120 POLR2KP53803 58 aaKnown RBP12.19□□□□□ -0.46
PCDHA1-203ENST00000504120 BBC3Q96PG8 261 aaPredicted RBP12.19□□□□□ -0.46
PCDHA1-203ENST00000504120 FAM19A1Q7Z5A9 133 aa12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 SYCNQ0VAF6 134 aa12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 DCANP1Q8TF63 244 aa12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 ATRXP46100 2492 aa12.18□□□□□ -0.46
PCDHA1-203ENST00000504120 CD164L2Q6UWJ8 174 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 PIEZO1Q92508 2521 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 MT-ATP8P03928 68 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 NDUFV3P56181 108 aaKnown RBP12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 PRR14LQ5THK1 2151 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 DSCAMO60469 2012 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 SLPIP03973 132 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 CNFNQ9BYD5 112 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 XAGE1AQ9HD64 81 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 RNF183Q96D59 192 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 KIR2DL5BQ8NHK3 375 aa12.17□□□□□ -0.46
PCDHA1-203ENST00000504120 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
PCDHA1-203ENST00000504120 C6orf99Q4VX62 202 aa12.16□□□□□ -0.46
PCDHA1-203ENST00000504120 LY6G6DO95868 133 aa12.15□□□□□ -0.46
PCDHA1-203ENST00000504120 DSCAML1Q8TD84 2053 aa12.15□□□□□ -0.46
PCDHA1-203ENST00000504120 TRAV10A0A0B4J240 114 aa12.15□□□□□ -0.46
PCDHA1-203ENST00000504120 Q6ZS46 218 aa12.15□□□□□ -0.47
PCDHA1-203ENST00000504120 C2orf91Q6ZV80 131 aa12.15□□□□□ -0.47
PCDHA1-203ENST00000504120 A0A087WZ39 114 aa12.14□□□□□ -0.47
PCDHA1-203ENST00000504120 UQCRQO14949 82 aa12.14□□□□□ -0.47
PCDHA1-203ENST00000504120 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
PCDHA1-203ENST00000504120 MRGPRG-AS1Q2M3A8 158 aa12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 A8MZ25 164 aa12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 SONP18583 2426 aaKnown RBP12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 LELP1Q5T871 98 aa12.13□□□□□ -0.47
PCDHA1-203ENST00000504120 LINC00959A0A1B0GUT2 108 aa12.12□□□□□ -0.47
PCDHA1-203ENST00000504120 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
PCDHA1-203ENST00000504120 UBE2D1P51668 147 aa12.12□□□□□ -0.47
PCDHA1-203ENST00000504120 FAM19A5Q7Z5A7 132 aaPredicted RBP12.12□□□□□ -0.47
PCDHA1-203ENST00000504120 IGKV4-1P06312 121 aa12.11□□□□□ -0.47
PCDHA1-203ENST00000504120 ENHOQ6UWT2 76 aa12.11□□□□□ -0.47
PCDHA1-203ENST00000504120 C20orf197Q8N268 126 aa12.11□□□□□ -0.47
PCDHA1-203ENST00000504120 MRPS12O15235 138 aaKnown RBP12.1□□□□□ -0.47
PCDHA1-203ENST00000504120 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
PCDHA1-203ENST00000504120 WFDC10AQ9H1F0 79 aa12.1□□□□□ -0.47
PCDHA1-203ENST00000504120 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
PCDHA1-203ENST00000504120 A0A096LNI7 61 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 KPRPQ5T749 579 aaPredicted RBP12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 NAV2Q8IVL1 2488 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 CDSNQ15517 529 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 M0R378 163 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 LST1O00453 97 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 NAV3Q8IVL0 2385 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 UBE2D3P61077 147 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 UBE2D2P62837 147 aa12.09□□□□□ -0.47
PCDHA1-203ENST00000504120 CCKP06307 115 aa12.08□□□□□ -0.48
PCDHA1-203ENST00000504120 COX17Q14061 63 aa12.08□□□□□ -0.48
PCDHA1-203ENST00000504120 SORL1Q92673 2214 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 SCXQ7RTU7 201 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 SRCAPQ6ZRS2 3230 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 IGLV4-69A0A075B6H9 119 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 MUC7Q8TAX7 377 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 SEC61GP60059 68 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 CRIP2P52943 208 aaPredicted RBP12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 DHRS4-AS1Q9P1J3 65 aa12.07□□□□□ -0.48
PCDHA1-203ENST00000504120 NCOR2Q9Y618 2525 aa12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 IGIPA6NJ69 53 aa12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 CDC42SE2Q9NRR3 84 aa12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 AVPP01185 164 aa12.06□□□□□ -0.48
PCDHA1-203ENST00000504120 PRM2P04554 102 aa12.05□□□□□ -0.48
PCDHA1-203ENST00000504120 Q6ZQY7 126 aa12.05□□□□□ -0.48
PCDHA1-203ENST00000504120 IGF2RP11717 2491 aa12.05□□□□□ -0.48
PCDHA1-203ENST00000504120 C3orf22Q8N5N4 141 aa12.05□□□□□ -0.48
PCDHA1-203ENST00000504120 Q8IZM0 81 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 C1orf158Q8N1D5 194 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 CLUHP3Q96NS8 147 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 SMIM11BQ8TCY0 68 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 IMUPQ9GZP8 106 aa12.04□□□□□ -0.48
PCDHA1-203ENST00000504120 FAM236DA0A1B0GTK5 79 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 FAM236CP0DP71 79 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 PLXNB1O43157 2135 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms