RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 GAGE5Q13069 117 aa17.68■□□□□ 0.42
DDX41-202ENST00000503078 GAGE6Q13070 117 aa17.68■□□□□ 0.42
DDX41-202ENST00000503078 CIRBPQ14011 172 aaKnown RBP17.68■□□□□ 0.42
DDX41-202ENST00000503078 ZNF462Q96JM2 2506 aa17.68■□□□□ 0.42
DDX41-202ENST00000503078 A0A096LNT2 108 aa17.67■□□□□ 0.42
DDX41-202ENST00000503078 PEMTQ9UBM1 199 aa17.67■□□□□ 0.42
DDX41-202ENST00000503078 TTC32Q5I0X7 151 aa17.66■□□□□ 0.42
DDX41-202ENST00000503078 MAPK1IP1LQ8NDC0 245 aa17.66■□□□□ 0.42
DDX41-202ENST00000503078 CREBBPQ92793 2442 aa17.66■□□□□ 0.42
DDX41-202ENST00000503078 INSP01308 110 aa17.66■□□□□ 0.42
DDX41-202ENST00000503078 COX6A2Q02221 97 aa17.66■□□□□ 0.42
DDX41-202ENST00000503078 CITED2Q99967 270 aaPredicted RBP17.66■□□□□ 0.42
DDX41-202ENST00000503078 DEFB121Q5J5C9 76 aa17.65■□□□□ 0.42
DDX41-202ENST00000503078 IGHV3OR16-12A0A075B7B8 117 aa17.65■□□□□ 0.42
DDX41-202ENST00000503078 IGLV5-39A0A0G2JS06 123 aa17.64■□□□□ 0.41
DDX41-202ENST00000503078 HERVK_113P63121 156 aa17.64■□□□□ 0.41
DDX41-202ENST00000503078 LINC00308Q8TCZ7 52 aa17.64■□□□□ 0.41
DDX41-202ENST00000503078 MRPL23Q16540 153 aaKnown RBP17.64■□□□□ 0.41
DDX41-202ENST00000503078 Q9H8V8 135 aa17.64■□□□□ 0.41
DDX41-202ENST00000503078 FAM240AA0A1B0GVK7 77 aa17.63■□□□□ 0.41
DDX41-202ENST00000503078 FSHBP01225 129 aa17.62■□□□□ 0.41
DDX41-202ENST00000503078 LINC00242Q5T6M2 205 aa17.62■□□□□ 0.41
DDX41-202ENST00000503078 DYNLRB2Q8TF09 96 aa17.61■□□□□ 0.41
DDX41-202ENST00000503078 UBR5O95071 2799 aaPredicted RBP17.61■□□□□ 0.41
DDX41-202ENST00000503078 ZNF843Q8N446 348 aa17.6■□□□□ 0.41
DDX41-202ENST00000503078 FAM208BQ5VWN6 2430 aa17.6■□□□□ 0.41
DDX41-202ENST00000503078 LRRK2Q5S007 2527 aa17.59■□□□□ 0.41
DDX41-202ENST00000503078 FBN2P35556 2912 aa17.59■□□□□ 0.41
DDX41-202ENST00000503078 FAM19A3Q7Z5A8 133 aa17.59■□□□□ 0.41
DDX41-202ENST00000503078 ZNF625Q96I27 306 aaPredicted RBP17.59■□□□□ 0.41
DDX41-202ENST00000503078 CSMD2Q7Z408 3487 aa17.58■□□□□ 0.4
DDX41-202ENST00000503078 B5MCH6 92 aa17.58■□□□□ 0.4
DDX41-202ENST00000503078 DEFB114Q30KQ6 69 aa17.58■□□□□ 0.4
DDX41-202ENST00000503078 C4orf3Q8WVX3 66 aa17.58■□□□□ 0.4
DDX41-202ENST00000503078 LINC00694P0DN24 101 aa17.57■□□□□ 0.4
DDX41-202ENST00000503078 COPS9Q8WXC6 57 aa17.57■□□□□ 0.4
DDX41-202ENST00000503078 SMIM1B2RUZ4 78 aa17.57■□□□□ 0.4
DDX41-202ENST00000503078 XCL2Q9UBD3 114 aa17.57■□□□□ 0.4
DDX41-202ENST00000503078 SS18L2Q9UHA2 77 aa17.57■□□□□ 0.4
DDX41-202ENST00000503078 ANKRD17O75179 2603 aaKnown RBP17.56■□□□□ 0.4
DDX41-202ENST00000503078 A0A0U1RRA0 63 aa17.56■□□□□ 0.4
DDX41-202ENST00000503078 COX7A2LO14548 114 aa17.56■□□□□ 0.4
DDX41-202ENST00000503078 Q8N2B8 174 aa17.56■□□□□ 0.4
DDX41-202ENST00000503078 GAGE12JA6NER3 117 aa17.55■□□□□ 0.4
DDX41-202ENST00000503078 GAGE7O76087 117 aa17.55■□□□□ 0.4
DDX41-202ENST00000503078 GAGE12FP0CL80 117 aa17.55■□□□□ 0.4
DDX41-202ENST00000503078 GAGE12GP0CL81 117 aa17.55■□□□□ 0.4
DDX41-202ENST00000503078 GAGE12IP0CL82 117 aa17.55■□□□□ 0.4
DDX41-202ENST00000503078 GAGE4Q13068 117 aa17.55■□□□□ 0.4
DDX41-202ENST00000503078 KHDC1LQ5JSQ8 128 aa17.55■□□□□ 0.4
DDX41-202ENST00000503078 CSDC2Q9Y534 153 aaKnown RBP17.55■□□□□ 0.4
DDX41-202ENST00000503078 NDUFA7O95182 113 aa17.54■□□□□ 0.4
DDX41-202ENST00000503078 SOSTDC1Q6X4U4 206 aa17.54■□□□□ 0.4
DDX41-202ENST00000503078 USP9YO00507 2555 aaPredicted RBP17.54■□□□□ 0.4
DDX41-202ENST00000503078 TRGV1A0A0A0MS02 117 aa17.53■□□□□ 0.4
DDX41-202ENST00000503078 SHISA2Q6UWI4 295 aa17.53■□□□□ 0.4
DDX41-202ENST00000503078 TRAV13-1A0A0B4J241 112 aa17.53■□□□□ 0.4
DDX41-202ENST00000503078 IL17DQ8TAD2 202 aa17.53■□□□□ 0.4
DDX41-202ENST00000503078 POLQO75417 2590 aa17.53■□□□□ 0.4
DDX41-202ENST00000503078 CCDC179H3BU77 68 aa17.52■□□□□ 0.4
DDX41-202ENST00000503078 RPL36AP83881 106 aaKnown RBP17.52■□□□□ 0.4
DDX41-202ENST00000503078 RPL36ALQ969Q0 106 aaKnown RBP17.52■□□□□ 0.4
DDX41-202ENST00000503078 CENPEQ02224 2701 aa17.52■□□□□ 0.4
DDX41-202ENST00000503078 IGHV4-31P0DP07 118 aa17.52■□□□□ 0.39
DDX41-202ENST00000503078 PRIMA1Q86XR5 153 aa17.52■□□□□ 0.39
DDX41-202ENST00000503078 MEIG1Q5JSS6 88 aa17.51■□□□□ 0.39
DDX41-202ENST00000503078 NTM-AS1Q6ZSK4 140 aa17.51■□□□□ 0.39
DDX41-202ENST00000503078 C1orf158Q8N1D5 194 aa17.51■□□□□ 0.39
DDX41-202ENST00000503078 TRBV10-1A0A0K0K1A3 114 aa17.51■□□□□ 0.39
DDX41-202ENST00000503078 K7EQD1 137 aa17.5■□□□□ 0.39
DDX41-202ENST00000503078 DAZ2Q13117 558 aaKnown RBP17.5■□□□□ 0.39
DDX41-202ENST00000503078 DAZ4Q86SG3 579 aaKnown RBP17.5■□□□□ 0.39
DDX41-202ENST00000503078 DAZ3Q9NR90 486 aaKnown RBP17.5■□□□□ 0.39
DDX41-202ENST00000503078 ODF3L2Q3SX64 289 aa17.5■□□□□ 0.39
DDX41-202ENST00000503078 F5H768 121 aa17.48■□□□□ 0.39
DDX41-202ENST00000503078 STHQ8IWL8 128 aa17.48■□□□□ 0.39
DDX41-202ENST00000503078 CDC42SE2Q9NRR3 84 aa17.48■□□□□ 0.39
DDX41-202ENST00000503078 ZANQ9Y493 2812 aa17.48■□□□□ 0.39
DDX41-202ENST00000503078 ACYP1P07311 99 aa17.47■□□□□ 0.39
DDX41-202ENST00000503078 HERV-K104P63124 156 aa17.47■□□□□ 0.39
DDX41-202ENST00000503078 EPG5Q9HCE0 2579 aa17.47■□□□□ 0.39
DDX41-202ENST00000503078 TRBV7-7A0A0K0K1E9 115 aa17.47■□□□□ 0.39
DDX41-202ENST00000503078 KRTAP10-9P60411 292 aa17.47■□□□□ 0.39
DDX41-202ENST00000503078 SVIPQ8NHG7 77 aa17.47■□□□□ 0.39
DDX41-202ENST00000503078 PTPN13Q12923 2485 aa17.47■□□□□ 0.39
DDX41-202ENST00000503078 HIST2H2BDQ6DRA6 164 aa17.46■□□□□ 0.39
DDX41-202ENST00000503078 TRACP01848 142 aa17.45■□□□□ 0.38
DDX41-202ENST00000503078 Q6ZTI0 123 aa17.45■□□□□ 0.38
DDX41-202ENST00000503078 MXRA5Q9NR99 2828 aa17.45■□□□□ 0.38
DDX41-202ENST00000503078 PPDPFQ9H3Y8 114 aa17.44■□□□□ 0.38
DDX41-202ENST00000503078 TRAV25A0A0B4J276 109 aa17.42■□□□□ 0.38
DDX41-202ENST00000503078 CR1P17927 2039 aa17.42■□□□□ 0.38
DDX41-202ENST00000503078 Q96MF0 132 aa17.41■□□□□ 0.38
DDX41-202ENST00000503078 UBE2L6O14933 153 aa17.39■□□□□ 0.38
DDX41-202ENST00000503078 BAALC-AS2P0C853 105 aa17.39■□□□□ 0.38
DDX41-202ENST00000503078 ABCA12Q86UK0 2595 aa17.39■□□□□ 0.37
DDX41-202ENST00000503078 DEFB113Q30KQ7 82 aa17.39■□□□□ 0.37
DDX41-202ENST00000503078 TMEM243Q9BU79 118 aa17.38■□□□□ 0.37
DDX41-202ENST00000503078 NAV2Q8IVL1 2488 aa17.38■□□□□ 0.37
DDX41-202ENST00000503078 FAM218AQ96MZ4 157 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms