RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 SPINK13Q1W4C9 94 aa10.59□□□□□ -0.71
NEAT1-201ENST00000499732 MUSTN1Q8IVN3 82 aa10.59□□□□□ -0.71
NEAT1-201ENST00000499732 WNK1Q9H4A3 2382 aa10.59□□□□□ -0.71
NEAT1-201ENST00000499732 A0A0J9YXV3 536 aa10.58□□□□□ -0.72
NEAT1-201ENST00000499732 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
NEAT1-201ENST00000499732 A0A1W2PRX2 142 aa10.58□□□□□ -0.72
NEAT1-201ENST00000499732 IGKV3-20P01619 116 aa10.58□□□□□ -0.72
NEAT1-201ENST00000499732 MRPS36P82909 103 aaKnown RBP10.58□□□□□ -0.72
NEAT1-201ENST00000499732 CCL24O00175 119 aa10.58□□□□□ -0.72
NEAT1-201ENST00000499732 ATXN8Q156A1 80 aa10.58□□□□□ -0.72
NEAT1-201ENST00000499732 GEMIN7Q9H840 131 aaKnown RBP10.58□□□□□ -0.72
NEAT1-201ENST00000499732 TENM1Q9UKZ4 2725 aa10.57□□□□□ -0.72
NEAT1-201ENST00000499732 C9JAW5 83 aa10.57□□□□□ -0.72
NEAT1-201ENST00000499732 TIMM21Q9BVV7 248 aa10.57□□□□□ -0.72
NEAT1-201ENST00000499732 SORL1Q92673 2214 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 TRBV30A0A0K0K1B3 111 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 ADARB2-AS1A8MUL3 147 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 IGHV3-30-3P0DP02 117 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 KRTAP10-3P60369 221 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 SPANXDQ9BXN6 97 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 IGHV3-64A0A075B6Q5 118 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 PIK3CD-AS1Q5SR53 167 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
NEAT1-201ENST00000499732 MGAM2Q2M2H8 2515 aa10.55□□□□□ -0.72
NEAT1-201ENST00000499732 IGHV1-58A0A0C4DH39 117 aa10.55□□□□□ -0.72
NEAT1-201ENST00000499732 Q1RN00 199 aa10.55□□□□□ -0.72
NEAT1-201ENST00000499732 SHISA2Q6UWI4 295 aa10.55□□□□□ -0.72
NEAT1-201ENST00000499732 LITAFQ99732 161 aa10.55□□□□□ -0.72
NEAT1-201ENST00000499732 DYNLRB2Q8TF09 96 aa10.54□□□□□ -0.72
NEAT1-201ENST00000499732 A8MTW9 85 aa10.54□□□□□ -0.72
NEAT1-201ENST00000499732 DEFB114Q30KQ6 69 aa10.54□□□□□ -0.72
NEAT1-201ENST00000499732 LINC01620Q4KN68 170 aa10.54□□□□□ -0.72
NEAT1-201ENST00000499732 FAM104AQ969W3 186 aa10.54□□□□□ -0.72
NEAT1-201ENST00000499732 SPANXA1Q9NS26 97 aa10.54□□□□□ -0.72
NEAT1-201ENST00000499732 TINCRA0A1B0GVN0 87 aa10.53□□□□□ -0.72
NEAT1-201ENST00000499732 RPL13AP40429 203 aaKnown RBP10.53□□□□□ -0.72
NEAT1-201ENST00000499732 RNF183Q96D59 192 aa10.53□□□□□ -0.72
NEAT1-201ENST00000499732 TRBV10-2A0A0K0K1G8 114 aa10.52□□□□□ -0.73
NEAT1-201ENST00000499732 SPXQ9BT56 116 aa10.52□□□□□ -0.73
NEAT1-201ENST00000499732 TNFRSF18Q9Y5U5 241 aa10.52□□□□□ -0.73
NEAT1-201ENST00000499732 H7C2G1 150 aa10.51□□□□□ -0.73
NEAT1-201ENST00000499732 RBMY1A1P0DJD3 496 aaKnown RBP10.51□□□□□ -0.73
NEAT1-201ENST00000499732 RBMY1CP0DJD4 496 aa10.51□□□□□ -0.73
NEAT1-201ENST00000499732 RBMY1FQ15415 496 aaKnown RBP10.51□□□□□ -0.73
NEAT1-201ENST00000499732 TRIAP1O43715 76 aa10.51□□□□□ -0.73
NEAT1-201ENST00000499732 MIAQ16674 131 aa10.51□□□□□ -0.73
NEAT1-201ENST00000499732 ZFAND6Q6FIF0 208 aa10.51□□□□□ -0.73
NEAT1-201ENST00000499732 VSIG2Q96IQ7 327 aa10.51□□□□□ -0.73
NEAT1-201ENST00000499732 CITED1Q99966 193 aa10.51□□□□□ -0.73
NEAT1-201ENST00000499732 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
NEAT1-201ENST00000499732 NACAE9PAV3 2078 aa10.5□□□□□ -0.73
NEAT1-201ENST00000499732 TIMM17BO60830 172 aa10.5□□□□□ -0.73
NEAT1-201ENST00000499732 DEFB131AP59861 70 aa10.5□□□□□ -0.73
NEAT1-201ENST00000499732 ZNF415Q09FC8 603 aa10.5□□□□□ -0.73
NEAT1-201ENST00000499732 UBE2D4Q9Y2X8 147 aa10.5□□□□□ -0.73
NEAT1-201ENST00000499732 TRAV26-1A0A087WT03 109 aa10.49□□□□□ -0.73
NEAT1-201ENST00000499732 NTN5Q8WTR8 489 aaPredicted RBP10.49□□□□□ -0.73
NEAT1-201ENST00000499732 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
NEAT1-201ENST00000499732 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
NEAT1-201ENST00000499732 ICOSQ9Y6W8 199 aa10.49□□□□□ -0.73
NEAT1-201ENST00000499732 TRAV8-3A0A0A6YYJ7 113 aa10.49□□□□□ -0.73
NEAT1-201ENST00000499732 KNCNA6PVL3 124 aa10.49□□□□□ -0.73
NEAT1-201ENST00000499732 MAP6D1Q9H9H5 199 aa10.49□□□□□ -0.73
NEAT1-201ENST00000499732 TRAV25A0A0B4J276 109 aa10.48□□□□□ -0.73
NEAT1-201ENST00000499732 H3BT86 120 aa10.48□□□□□ -0.73
NEAT1-201ENST00000499732 COX6CP09669 75 aa10.48□□□□□ -0.73
NEAT1-201ENST00000499732 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
NEAT1-201ENST00000499732 H3BMM0 161 aa10.47□□□□□ -0.73
NEAT1-201ENST00000499732 PF4P02776 101 aa10.47□□□□□ -0.73
NEAT1-201ENST00000499732 IFITM1P13164 125 aa10.47□□□□□ -0.73
NEAT1-201ENST00000499732 UBE2WQ96B02 151 aa10.47□□□□□ -0.73
NEAT1-201ENST00000499732 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
NEAT1-201ENST00000499732 MEGF8Q7Z7M0 2845 aa10.47□□□□□ -0.73
NEAT1-201ENST00000499732 RBMY1BA6NDE4 496 aaKnown RBP10.46□□□□□ -0.74
NEAT1-201ENST00000499732 RBMY1EA6NEQ0 496 aaKnown RBP10.46□□□□□ -0.74
NEAT1-201ENST00000499732 WIPF1O43516 503 aa10.46□□□□□ -0.74
NEAT1-201ENST00000499732 SNCGO76070 127 aa10.46□□□□□ -0.74
NEAT1-201ENST00000499732 PRSS2P07478 247 aa10.46□□□□□ -0.74
NEAT1-201ENST00000499732 RBMY1DP0C7P1 496 aaKnown RBP10.46□□□□□ -0.74
NEAT1-201ENST00000499732 ADAMTSL4-AS1Q5T5F5 129 aa10.46□□□□□ -0.74
NEAT1-201ENST00000499732 CEMP1Q6PRD7 247 aaPredicted RBP10.46□□□□□ -0.74
NEAT1-201ENST00000499732 Q6Q795 121 aa10.46□□□□□ -0.74
NEAT1-201ENST00000499732 ANAPC13Q9BS18 74 aa10.46□□□□□ -0.74
NEAT1-201ENST00000499732 IGLV5-45A0A087WSX0 123 aa10.45□□□□□ -0.74
NEAT1-201ENST00000499732 TRAV8-4A0A0B4J246 113 aa10.45□□□□□ -0.74
NEAT1-201ENST00000499732 LINC00482Q8N8I6 264 aa10.45□□□□□ -0.74
NEAT1-201ENST00000499732 IGHV3-53P01767 116 aa10.44□□□□□ -0.74
NEAT1-201ENST00000499732 TIRAPP58753 221 aa10.44□□□□□ -0.74
NEAT1-201ENST00000499732 ODF3L2Q3SX64 289 aa10.44□□□□□ -0.74
NEAT1-201ENST00000499732 NDUFA1O15239 70 aa10.44□□□□□ -0.74
NEAT1-201ENST00000499732 HTN1P15515 57 aa10.44□□□□□ -0.74
NEAT1-201ENST00000499732 RNASE13Q5GAN3 156 aaKnown RBP10.44□□□□□ -0.74
NEAT1-201ENST00000499732 C2orf82Q6UX34 121 aa10.44□□□□□ -0.74
NEAT1-201ENST00000499732 TEX49A0A1B0GTD5 131 aa10.43□□□□□ -0.74
NEAT1-201ENST00000499732 LST1O00453 97 aa10.43□□□□□ -0.74
NEAT1-201ENST00000499732 GAGE2BQ13066 116 aa10.43□□□□□ -0.74
NEAT1-201ENST00000499732 GAGE2EQ4V326 116 aa10.43□□□□□ -0.74
NEAT1-201ENST00000499732 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
NEAT1-201ENST00000499732 GAGE2DQ9UEU5 116 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms