RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 OR5A1Q8NGJ0 315 aa13.21□□□□□ -0.3
LINC01550-201ENST00000499006 TMEM101Q96IK0 257 aa13.21□□□□□ -0.3
LINC01550-201ENST00000499006 CDC42SE2Q9NRR3 84 aa13.21□□□□□ -0.3
LINC01550-201ENST00000499006 LCE6AA0A183 80 aa13.2□□□□□ -0.3
LINC01550-201ENST00000499006 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
LINC01550-201ENST00000499006 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
LINC01550-201ENST00000499006 TIMM17AQ99595 171 aa13.2□□□□□ -0.3
LINC01550-201ENST00000499006 KRTAP1-5Q9BYS1 174 aa13.2□□□□□ -0.3
LINC01550-201ENST00000499006 HYDINQ4G0P3 5121 aa13.19□□□□□ -0.3
LINC01550-201ENST00000499006 NBDYA0A0U1RRE5 68 aa13.19□□□□□ -0.3
LINC01550-201ENST00000499006 NPSP0C0P6 89 aa13.19□□□□□ -0.3
LINC01550-201ENST00000499006 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
LINC01550-201ENST00000499006 ZNF664Q8N3J9 261 aa13.19□□□□□ -0.3
LINC01550-201ENST00000499006 SCGB3A1Q96QR1 104 aa13.19□□□□□ -0.3
LINC01550-201ENST00000499006 OPRPNQ99935 248 aaPredicted RBP13.19□□□□□ -0.3
LINC01550-201ENST00000499006 KLK12Q9UKR0 248 aa13.19□□□□□ -0.3
LINC01550-201ENST00000499006 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
LINC01550-201ENST00000499006 TRAV9-2A0A087WT02 112 aa13.18□□□□□ -0.3
LINC01550-201ENST00000499006 Q6ZUT4 128 aa13.18□□□□□ -0.3
LINC01550-201ENST00000499006 C10orf126Q8N4M7 172 aa13.18□□□□□ -0.3
LINC01550-201ENST00000499006 PRR34Q9NV39 138 aa13.18□□□□□ -0.3
LINC01550-201ENST00000499006 IBA57-AS1B1ANH7 110 aa13.17□□□□□ -0.3
LINC01550-201ENST00000499006 LINC00269Q8N2A0 174 aa13.17□□□□□ -0.3
LINC01550-201ENST00000499006 TMEM141Q96I45 108 aa13.17□□□□□ -0.3
LINC01550-201ENST00000499006 S100A6P06703 90 aa13.16□□□□□ -0.3
LINC01550-201ENST00000499006 TTC32Q5I0X7 151 aa13.16□□□□□ -0.3
LINC01550-201ENST00000499006 RNASE13Q5GAN3 156 aaKnown RBP13.16□□□□□ -0.3
LINC01550-201ENST00000499006 ENHOQ6UWT2 76 aa13.16□□□□□ -0.3
LINC01550-201ENST00000499006 Q6ZR54 194 aa13.16□□□□□ -0.3
LINC01550-201ENST00000499006 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.15□□□□□ -0.3
LINC01550-201ENST00000499006 REG3AQ06141 175 aa13.15□□□□□ -0.3
LINC01550-201ENST00000499006 AMELXQ99217 191 aa13.15□□□□□ -0.3
LINC01550-201ENST00000499006 KMT2CQ8NEZ4 4911 aaKnown RBP13.14□□□□□ -0.31
LINC01550-201ENST00000499006 ATP5LO75964 103 aa13.14□□□□□ -0.31
LINC01550-201ENST00000499006 LEPROTL1O95214 131 aa13.14□□□□□ -0.31
LINC01550-201ENST00000499006 LINC00173Q6ZV60 143 aa13.14□□□□□ -0.31
LINC01550-201ENST00000499006 C5orf52A6NGY3 159 aa13.13□□□□□ -0.31
LINC01550-201ENST00000499006 M0R2N4 97 aa13.13□□□□□ -0.31
LINC01550-201ENST00000499006 CLPSL2Q6UWE3 100 aa13.13□□□□□ -0.31
LINC01550-201ENST00000499006 HIST3H2BBQ8N257 126 aa13.13□□□□□ -0.31
LINC01550-201ENST00000499006 SNRPEP62304 92 aaKnown RBP13.12□□□□□ -0.31
LINC01550-201ENST00000499006 PAPPA-AS1Q5QFB9 102 aa13.12□□□□□ -0.31
LINC01550-201ENST00000499006 BAALCQ8WXS3 180 aa13.12□□□□□ -0.31
LINC01550-201ENST00000499006 UBE2WQ96B02 151 aa13.12□□□□□ -0.31
LINC01550-201ENST00000499006 PACRGQ96M98 296 aaPredicted RBP13.12□□□□□ -0.31
LINC01550-201ENST00000499006 TMA7Q9Y2S6 64 aaKnown RBP13.12□□□□□ -0.31
LINC01550-201ENST00000499006 FABP4P15090 132 aa13.11□□□□□ -0.31
LINC01550-201ENST00000499006 ZC2HC1BQ5TFG8 222 aa13.11□□□□□ -0.31
LINC01550-201ENST00000499006 Q6ZN92 141 aa13.11□□□□□ -0.31
LINC01550-201ENST00000499006 TEX43Q6ZNM6 134 aa13.11□□□□□ -0.31
LINC01550-201ENST00000499006 IFI27L1Q96BM0 104 aa13.11□□□□□ -0.31
LINC01550-201ENST00000499006 VCX2Q9H322 139 aa13.11□□□□□ -0.31
LINC01550-201ENST00000499006 CRPP02741 224 aa13.1□□□□□ -0.31
LINC01550-201ENST00000499006 MIAQ16674 131 aa13.1□□□□□ -0.31
LINC01550-201ENST00000499006 HSPB8Q9UJY1 196 aa13.1□□□□□ -0.31
LINC01550-201ENST00000499006 TRAV8-3A0A0A6YYJ7 113 aa13.1□□□□□ -0.31
LINC01550-201ENST00000499006 LINC00959A0A1B0GUT2 108 aa13.1□□□□□ -0.31
LINC01550-201ENST00000499006 DNAH10Q8IVF4 4471 aa13.09□□□□□ -0.31
LINC01550-201ENST00000499006 IGKV3OR2-268A0A0C4DH90 116 aa13.09□□□□□ -0.31
LINC01550-201ENST00000499006 TRAV8-4A0A0B4J246 113 aa13.08□□□□□ -0.32
LINC01550-201ENST00000499006 IFITM10A6NMD0 228 aa13.08□□□□□ -0.32
LINC01550-201ENST00000499006 PMVKQ15126 192 aa13.08□□□□□ -0.32
LINC01550-201ENST00000499006 CST9LQ9H4G1 147 aa13.08□□□□□ -0.32
LINC01550-201ENST00000499006 Q9HAA7 133 aa13.08□□□□□ -0.32
LINC01550-201ENST00000499006 C2orf88Q9BSF0 95 aa13.07□□□□□ -0.32
LINC01550-201ENST00000499006 DNAH2Q9P225 4427 aa13.07□□□□□ -0.32
LINC01550-201ENST00000499006 TRAV13-1A0A0B4J241 112 aa13.06□□□□□ -0.32
LINC01550-201ENST00000499006 CCL25O15444 150 aa13.06□□□□□ -0.32
LINC01550-201ENST00000499006 UBE2D1P51668 147 aa13.06□□□□□ -0.32
LINC01550-201ENST00000499006 HIST1H2BLQ99880 126 aa13.06□□□□□ -0.32
LINC01550-201ENST00000499006 PRSS29PA6NIE9 313 aa13.05□□□□□ -0.32
LINC01550-201ENST00000499006 PRSS1P07477 247 aa13.05□□□□□ -0.32
LINC01550-201ENST00000499006 S100A2P29034 98 aa13.05□□□□□ -0.32
LINC01550-201ENST00000499006 KRTAP26-1Q6PEX3 210 aa13.05□□□□□ -0.32
LINC01550-201ENST00000499006 FRAS1Q86XX4 4008 aa13.04□□□□□ -0.32
LINC01550-201ENST00000499006 IGLV10-54A0A075B6I4 117 aa13.04□□□□□ -0.32
LINC01550-201ENST00000499006 TRAV12-1A0A0B4J245 112 aa13.04□□□□□ -0.32
LINC01550-201ENST00000499006 SS18Q15532 418 aa13.04□□□□□ -0.32
LINC01550-201ENST00000499006 FAM19A3Q7Z5A8 133 aa13.04□□□□□ -0.32
LINC01550-201ENST00000499006 RYR2Q92736 4967 aa13.04□□□□□ -0.32
LINC01550-201ENST00000499006 Q6ZRN7 208 aaPredicted RBP13.04□□□□□ -0.32
LINC01550-201ENST00000499006 C6orf223Q8N319 242 aa13.04□□□□□ -0.32
LINC01550-201ENST00000499006 CHCHD10Q8WYQ3 142 aaPredicted RBP13.04□□□□□ -0.32
LINC01550-201ENST00000499006 C1orf43Q9BWL3 253 aa13.04□□□□□ -0.32
LINC01550-201ENST00000499006 IGKV2D-24A0A075B6R9 120 aa13.03□□□□□ -0.32
LINC01550-201ENST00000499006 LINC00242Q5T6M2 205 aa13.03□□□□□ -0.32
LINC01550-201ENST00000499006 NFE4Q86UQ8 179 aa13.03□□□□□ -0.32
LINC01550-201ENST00000499006 RMI2Q96E14 147 aa13.03□□□□□ -0.32
LINC01550-201ENST00000499006 MAP1LC3CQ9BXW4 147 aa13.03□□□□□ -0.32
LINC01550-201ENST00000499006 C3orf79P0CE67 100 aa13.01□□□□□ -0.33
LINC01550-201ENST00000499006 C1orf134Q5TEV5 83 aa13.01□□□□□ -0.33
LINC01550-201ENST00000499006 COX11Q9Y6N1 276 aa13.01□□□□□ -0.33
LINC01550-201ENST00000499006 A0A0J9YXV3 536 aa13□□□□□ -0.33
LINC01550-201ENST00000499006 SYS1-DBNDD2H3BUS1 97 aa13□□□□□ -0.33
LINC01550-201ENST00000499006 XCL1P47992 114 aa13□□□□□ -0.33
LINC01550-201ENST00000499006 CD164L2Q6UWJ8 174 aa13□□□□□ -0.33
LINC01550-201ENST00000499006 SPATA12Q7Z6I5 190 aa13□□□□□ -0.33
LINC01550-201ENST00000499006 IGLV4-69A0A075B6H9 119 aa12.99□□□□□ -0.33
LINC01550-201ENST00000499006 H0Y8G0 127 aa12.99□□□□□ -0.33
LINC01550-201ENST00000499006 COX6A2Q02221 97 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms