RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 TRAV8-4A0A0B4J246 113 aa11.08□□□□□ -0.64
PRKCB-210ENST00000498739 PRSS47A8MTI9 375 aa11.08□□□□□ -0.64
PRKCB-210ENST00000498739 RAB5AP20339 215 aa11.08□□□□□ -0.64
PRKCB-210ENST00000498739 DGAT2L7PQ6IED9 249 aa11.08□□□□□ -0.64
PRKCB-210ENST00000498739 SMAGPQ0VAQ4 97 aa11.07□□□□□ -0.64
PRKCB-210ENST00000498739 CDPF1Q6NVV7 123 aa11.07□□□□□ -0.64
PRKCB-210ENST00000498739 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
PRKCB-210ENST00000498739 MT-ND6P03923 174 aa11.06□□□□□ -0.64
PRKCB-210ENST00000498739 KRTAP26-1Q6PEX3 210 aa11.06□□□□□ -0.64
PRKCB-210ENST00000498739 MRPL18Q9H0U6 180 aaKnown RBP11.06□□□□□ -0.64
PRKCB-210ENST00000498739 PKHD1P08F94 4074 aa11.06□□□□□ -0.64
PRKCB-210ENST00000498739 IGLV5-52A0A0A0MRZ9 124 aa11.05□□□□□ -0.64
PRKCB-210ENST00000498739 RPL39P62891 51 aaKnown RBP11.05□□□□□ -0.64
PRKCB-210ENST00000498739 ZNF664Q8N3J9 261 aa11.05□□□□□ -0.64
PRKCB-210ENST00000498739 Q8N8P6 123 aa11.05□□□□□ -0.64
PRKCB-210ENST00000498739 NTN5Q8WTR8 489 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-210ENST00000498739 CDC42SE2Q9NRR3 84 aa11.05□□□□□ -0.64
PRKCB-210ENST00000498739 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-210ENST00000498739 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
PRKCB-210ENST00000498739 CSDC2Q9Y534 153 aaKnown RBP11.04□□□□□ -0.64
PRKCB-210ENST00000498739 USP17L23D6RBM5 183 aa11.03□□□□□ -0.64
PRKCB-210ENST00000498739 TIMM21Q9BVV7 248 aa11.03□□□□□ -0.64
PRKCB-210ENST00000498739 GAGE12HA6NDE8 117 aa11.02□□□□□ -0.65
PRKCB-210ENST00000498739 IFI27P40305 119 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-210ENST00000498739 RNASE13Q5GAN3 156 aaKnown RBP11.02□□□□□ -0.65
PRKCB-210ENST00000498739 Q6ZUT4 128 aa11.02□□□□□ -0.65
PRKCB-210ENST00000498739 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-210ENST00000498739 ALKBH7Q9BT30 221 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-210ENST00000498739 NXT2Q9NPJ8 142 aaKnown RBP11.02□□□□□ -0.65
PRKCB-210ENST00000498739 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
PRKCB-210ENST00000498739 LINC00959A0A1B0GUT2 108 aa11.01□□□□□ -0.65
PRKCB-210ENST00000498739 C14orf177Q52M58 125 aa11.01□□□□□ -0.65
PRKCB-210ENST00000498739 SPANXA1Q9NS26 97 aa11.01□□□□□ -0.65
PRKCB-210ENST00000498739 GCSHP23434 173 aa11□□□□□ -0.65
PRKCB-210ENST00000498739 SS18Q15532 418 aa11□□□□□ -0.65
PRKCB-210ENST00000498739 ORMDL2Q53FV1 153 aa11□□□□□ -0.65
PRKCB-210ENST00000498739 CBLN2Q8IUK8 224 aa11□□□□□ -0.65
PRKCB-210ENST00000498739 DNAH5Q8TE73 4624 aa11□□□□□ -0.65
PRKCB-210ENST00000498739 K7EMI3 77 aa10.99□□□□□ -0.65
PRKCB-210ENST00000498739 CCL25O15444 150 aa10.99□□□□□ -0.65
PRKCB-210ENST00000498739 XCL1P47992 114 aa10.99□□□□□ -0.65
PRKCB-210ENST00000498739 PRSS3P2Q8NHM4 247 aa10.99□□□□□ -0.65
PRKCB-210ENST00000498739 YPEL4Q96NS1 127 aa10.99□□□□□ -0.65
PRKCB-210ENST00000498739 SMCO4Q9NRQ5 59 aa10.99□□□□□ -0.65
PRKCB-210ENST00000498739 C2orf66Q6UXQ4 117 aa10.98□□□□□ -0.65
PRKCB-210ENST00000498739 OPRPNQ99935 248 aaPredicted RBP10.98□□□□□ -0.65
PRKCB-210ENST00000498739 CYSLTR1Q9Y271 337 aa10.98□□□□□ -0.65
PRKCB-210ENST00000498739 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
PRKCB-210ENST00000498739 PRSS1P07477 247 aa10.97□□□□□ -0.65
PRKCB-210ENST00000498739 KRTAP10-1P60331 282 aa10.97□□□□□ -0.65
PRKCB-210ENST00000498739 LRP1BQ9NZR2 4599 aa10.96□□□□□ -0.65
PRKCB-210ENST00000498739 MRPS36P82909 103 aaKnown RBP10.96□□□□□ -0.65
PRKCB-210ENST00000498739 FOXI1Q12951 378 aa10.96□□□□□ -0.65
PRKCB-210ENST00000498739 FAM104AQ969W3 186 aa10.96□□□□□ -0.65
PRKCB-210ENST00000498739 PYGO1Q9Y3Y4 419 aa10.96□□□□□ -0.65
PRKCB-210ENST00000498739 C1orf196B1AJZ1 125 aa10.95□□□□□ -0.66
PRKCB-210ENST00000498739 IGLV4-3A0A075B6K6 122 aa10.94□□□□□ -0.66
PRKCB-210ENST00000498739 hDV102S1A0JD36 115 aa10.94□□□□□ -0.66
PRKCB-210ENST00000498739 CD164L2Q6UWJ8 174 aa10.94□□□□□ -0.66
PRKCB-210ENST00000498739 FA2HQ7L5A8 372 aa10.94□□□□□ -0.66
PRKCB-210ENST00000498739 IFITM10A6NMD0 228 aa10.93□□□□□ -0.66
PRKCB-210ENST00000498739 CDK2AP2O75956 126 aa10.93□□□□□ -0.66
PRKCB-210ENST00000498739 G0S2P27469 103 aa10.93□□□□□ -0.66
PRKCB-210ENST00000498739 LINC01620Q4KN68 170 aa10.93□□□□□ -0.66
PRKCB-210ENST00000498739 CFAP161Q6P656 301 aa10.93□□□□□ -0.66
PRKCB-210ENST00000498739 C15orf56Q8N910 161 aa10.93□□□□□ -0.66
PRKCB-210ENST00000498739 TMEM141Q96I45 108 aa10.93□□□□□ -0.66
PRKCB-210ENST00000498739 KIAA1109Q2LD37 5005 aa10.92□□□□□ -0.66
PRKCB-210ENST00000498739 C18orf32Q8TCD1 76 aa10.92□□□□□ -0.66
PRKCB-210ENST00000498739 LINC01546A6NGU7 62 aa10.91□□□□□ -0.66
PRKCB-210ENST00000498739 HIGD2BQ4VC39 106 aa10.91□□□□□ -0.66
PRKCB-210ENST00000498739 Q6ZN92 141 aa10.91□□□□□ -0.66
PRKCB-210ENST00000498739 TOMM6Q96B49 74 aa10.91□□□□□ -0.66
PRKCB-210ENST00000498739 AP5S1Q9NUS5 200 aa10.91□□□□□ -0.66
PRKCB-210ENST00000498739 TEX43Q6ZNM6 134 aa10.9□□□□□ -0.66
PRKCB-210ENST00000498739 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
PRKCB-210ENST00000498739 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
PRKCB-210ENST00000498739 COX7A2LO14548 114 aa10.89□□□□□ -0.67
PRKCB-210ENST00000498739 MALP21145 153 aa10.89□□□□□ -0.67
PRKCB-210ENST00000498739 GVQW2A0A096LPI5 108 aaPredicted RBP10.88□□□□□ -0.67
PRKCB-210ENST00000498739 NPSP0C0P6 89 aa10.88□□□□□ -0.67
PRKCB-210ENST00000498739 ZC2HC1BQ5TFG8 222 aa10.88□□□□□ -0.67
PRKCB-210ENST00000498739 C5orf38Q86SI9 138 aa10.88□□□□□ -0.67
PRKCB-210ENST00000498739 SCGB3A1Q96QR1 104 aa10.88□□□□□ -0.67
PRKCB-210ENST00000498739 TIMM17AQ99595 171 aa10.88□□□□□ -0.67
PRKCB-210ENST00000498739 C2orf88Q9BSF0 95 aa10.88□□□□□ -0.67
PRKCB-210ENST00000498739 VCX2Q9H322 139 aa10.88□□□□□ -0.67
PRKCB-210ENST00000498739 LINC00614P0C842 121 aa10.87□□□□□ -0.67
PRKCB-210ENST00000498739 CNBPP62633 177 aaKnown RBP10.87□□□□□ -0.67
PRKCB-210ENST00000498739 ERASQ7Z444 233 aa10.87□□□□□ -0.67
PRKCB-210ENST00000498739 URB1-AS1Q96HZ7 61 aa10.87□□□□□ -0.67
PRKCB-210ENST00000498739 APOBP04114 4563 aaKnown RBP10.87□□□□□ -0.67
PRKCB-210ENST00000498739 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.86□□□□□ -0.67
PRKCB-210ENST00000498739 LINC01549A6NIU2 74 aa10.86□□□□□ -0.67
PRKCB-210ENST00000498739 XGP55808 180 aa10.86□□□□□ -0.67
PRKCB-210ENST00000498739 RAB5BP61020 215 aa10.86□□□□□ -0.67
PRKCB-210ENST00000498739 PAPPA-AS1Q5QFB9 102 aa10.86□□□□□ -0.67
PRKCB-210ENST00000498739 LINC00173Q6ZV60 143 aa10.86□□□□□ -0.67
PRKCB-210ENST00000498739 C9orf163Q8N9P6 203 aa10.86□□□□□ -0.67
PRKCB-210ENST00000498739 AMELXQ99217 191 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms