RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 SRSF9Q13242 221 aaKnown RBP eCLIP7.28□□□□□ -1.24
TSPAN1-209ENST00000498443 ZNF479Q96JC4 524 aa7.28□□□□□ -1.24
TSPAN1-209ENST00000498443 TM2D3Q9BRN9 247 aa7.28□□□□□ -1.24
TSPAN1-209ENST00000498443 JPT2Q9H910 190 aa7.28□□□□□ -1.24
TSPAN1-209ENST00000498443 SPANXA1Q9NS26 97 aa7.28□□□□□ -1.24
TSPAN1-209ENST00000498443 RYR1P21817 5038 aa7.28□□□□□ -1.24
TSPAN1-209ENST00000498443 IGLV4-69A0A075B6H9 119 aa7.27□□□□□ -1.25
TSPAN1-209ENST00000498443 IGLL5B9A064 214 aa7.27□□□□□ -1.25
TSPAN1-209ENST00000498443 J3QR89 54 aa7.27□□□□□ -1.25
TSPAN1-209ENST00000498443 TSHBP01222 138 aa7.27□□□□□ -1.25
TSPAN1-209ENST00000498443 TMEM170BQ5T4T1 132 aa7.27□□□□□ -1.25
TSPAN1-209ENST00000498443 NEGR1Q7Z3B1 354 aa7.27□□□□□ -1.25
TSPAN1-209ENST00000498443 LINC01587Q99440 93 aa7.27□□□□□ -1.25
TSPAN1-209ENST00000498443 OVOL2Q9BRP0 275 aa7.27□□□□□ -1.25
TSPAN1-209ENST00000498443 F8W1H4 67 aa7.26□□□□□ -1.25
TSPAN1-209ENST00000498443 LEPROTO15243 131 aa7.26□□□□□ -1.25
TSPAN1-209ENST00000498443 CIDEAO60543 219 aa7.26□□□□□ -1.25
TSPAN1-209ENST00000498443 RRN3P1Q2M238 152 aa7.26□□□□□ -1.25
TSPAN1-209ENST00000498443 DEFB135Q30KP9 77 aa7.26□□□□□ -1.25
TSPAN1-209ENST00000498443 RNASE8Q8TDE3 154 aaKnown RBP7.26□□□□□ -1.25
TSPAN1-209ENST00000498443 PHLDA1Q8WV24 401 aaPredicted RBP7.26□□□□□ -1.25
TSPAN1-209ENST00000498443 TTTY13Q9BZ97 58 aa7.26□□□□□ -1.25
TSPAN1-209ENST00000498443 J3QQQ9 107 aa7.25□□□□□ -1.25
TSPAN1-209ENST00000498443 DEFB4AO15263 64 aa7.25□□□□□ -1.25
TSPAN1-209ENST00000498443 RBX1P62877 108 aa7.25□□□□□ -1.25
TSPAN1-209ENST00000498443 MORN3Q6PF18 240 aaPredicted RBP7.25□□□□□ -1.25
TSPAN1-209ENST00000498443 STHQ8IWL8 128 aa7.25□□□□□ -1.25
TSPAN1-209ENST00000498443 RS1O15537 224 aa7.24□□□□□ -1.25
TSPAN1-209ENST00000498443 LY6G6CO95867 125 aa7.24□□□□□ -1.25
TSPAN1-209ENST00000498443 IGHV3-53P01767 116 aa7.24□□□□□ -1.25
TSPAN1-209ENST00000498443 PRM2P04554 102 aa7.24□□□□□ -1.25
TSPAN1-209ENST00000498443 RPL39P62891 51 aaKnown RBP7.24□□□□□ -1.25
TSPAN1-209ENST00000498443 COTL1Q14019 142 aa7.24□□□□□ -1.25
TSPAN1-209ENST00000498443 VPS25Q9BRG1 176 aa7.24□□□□□ -1.25
TSPAN1-209ENST00000498443 IGLV4-3A0A075B6K6 122 aa7.23□□□□□ -1.25
TSPAN1-209ENST00000498443 A0A0J9YY99 117 aa7.23□□□□□ -1.25
TSPAN1-209ENST00000498443 TRBV10-1A0A0K0K1A3 114 aa7.23□□□□□ -1.25
TSPAN1-209ENST00000498443 TMEM223A0PJW6 202 aa7.23□□□□□ -1.25
TSPAN1-209ENST00000498443 TMEM238C9JI98 176 aa7.23□□□□□ -1.25
TSPAN1-209ENST00000498443 SLC25A29Q8N8R3 303 aa7.23□□□□□ -1.25
TSPAN1-209ENST00000498443 TIMM21Q9BVV7 248 aa7.23□□□□□ -1.25
TSPAN1-209ENST00000498443 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 P0DMU3 169 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 FAM231AP0DMU4 169 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 FAM231CP0DMU5 169 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 HTN1P15515 57 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 UBE2D1P51668 147 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 RPL24P83731 157 aaKnown RBP7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 RNF151Q2KHN1 245 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 CFAP126Q5VTH2 177 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 AMELXQ99217 191 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 SPATA25Q9BR10 227 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 C1QTNF4Q9BXJ3 329 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 MRPL16Q9NX20 251 aaKnown RBP7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 XCL2Q9UBD3 114 aa7.22□□□□□ -1.25
TSPAN1-209ENST00000498443 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.26
TSPAN1-209ENST00000498443 K7ERJ3 54 aa7.21□□□□□ -1.26
TSPAN1-209ENST00000498443 RBMY1A1P0DJD3 496 aaKnown RBP7.21□□□□□ -1.26
TSPAN1-209ENST00000498443 RBMY1CP0DJD4 496 aa7.21□□□□□ -1.26
TSPAN1-209ENST00000498443 MRPS36P82909 103 aaKnown RBP7.21□□□□□ -1.26
TSPAN1-209ENST00000498443 RBMY1FQ15415 496 aaKnown RBP7.21□□□□□ -1.26
TSPAN1-209ENST00000498443 C11orf72Q8NBR9 251 aa7.21□□□□□ -1.26
TSPAN1-209ENST00000498443 ZNRF2Q8NHG8 242 aa7.21□□□□□ -1.26
TSPAN1-209ENST00000498443 A0A0J9YWU9 116 aa7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 TINCRA0A1B0GVN0 87 aa7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 ZNF22P17026 224 aaPredicted RBP7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 RPL36AP83881 106 aaKnown RBP7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 GAGE13Q4V321 117 aa7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 DGAT2L7PQ6IED9 249 aa7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 CSNK1G2-AS1Q8NCQ2 148 aa7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 RPL36ALQ969Q0 106 aaKnown RBP7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 RNF183Q96D59 192 aa7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 NAA38Q9BRA0 125 aaKnown RBP7.2□□□□□ -1.26
TSPAN1-209ENST00000498443 KIAA1109Q2LD37 5005 aa7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 APOC4P55056 127 aa7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 DAZ2Q13117 558 aaKnown RBP7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 DAZ4Q86SG3 579 aaKnown RBP7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 TMEM263Q8WUH6 116 aaKnown RBP7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 COPS9Q8WXC6 57 aa7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 GEMIN7Q9H840 131 aaKnown RBP7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 DAZ3Q9NR90 486 aaKnown RBP7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 PGPEP1Q9NXJ5 209 aa7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 DNAH10Q8IVF4 4471 aa7.19□□□□□ -1.26
TSPAN1-209ENST00000498443 TRAV4A0A0B4J268 109 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 IGHV1-58A0A0C4DH39 117 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 A0A0J9YXV3 536 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 AZU1P20160 251 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 EMP1P54849 157 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 TIRAPP58753 221 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 KIR2DL5BQ8NHK3 375 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 IL17DQ8TAD2 202 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 C16orf74Q96GX8 76 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 PRO1854Q9UHT4 67 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 X6R8D5 127 aa7.18□□□□□ -1.26
TSPAN1-209ENST00000498443 IGHV3OR16-12A0A075B7B8 117 aa7.17□□□□□ -1.26
TSPAN1-209ENST00000498443 IGHV3-73A0A0B4J1V6 119 aa7.17□□□□□ -1.26
TSPAN1-209ENST00000498443 A0A0B4J2C4 111 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms