RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 C6orf223Q8N319 242 aa13.49□□□□□ -0.25
CTSD-206ENST00000497544 OR5A1Q8NGJ0 315 aa13.49□□□□□ -0.25
CTSD-206ENST00000497544 UBE2WQ96B02 151 aa13.49□□□□□ -0.25
CTSD-206ENST00000497544 CRPP02741 224 aa13.48□□□□□ -0.25
CTSD-206ENST00000497544 Q9HAA7 133 aa13.48□□□□□ -0.25
CTSD-206ENST00000497544 CYSLTR1Q9Y271 337 aa13.48□□□□□ -0.25
CTSD-206ENST00000497544 UBE2D4Q9Y2X8 147 aa13.48□□□□□ -0.25
CTSD-206ENST00000497544 LINC01546A6NGU7 62 aa13.47□□□□□ -0.25
CTSD-206ENST00000497544 Q0VG73 95 aa13.47□□□□□ -0.25
CTSD-206ENST00000497544 C2orf66Q6UXQ4 117 aa13.47□□□□□ -0.25
CTSD-206ENST00000497544 NFE4Q86UQ8 179 aa13.47□□□□□ -0.25
CTSD-206ENST00000497544 BAGE3Q86Y29 109 aa13.47□□□□□ -0.25
CTSD-206ENST00000497544 LINC00269Q8N2A0 174 aa13.47□□□□□ -0.25
CTSD-206ENST00000497544 TIMM21Q9BVV7 248 aa13.47□□□□□ -0.25
CTSD-206ENST00000497544 AP5S1Q9NUS5 200 aa13.47□□□□□ -0.25
CTSD-206ENST00000497544 UBR4Q5T4S7 5183 aa13.46□□□□□ -0.25
CTSD-206ENST00000497544 CSDC2Q9Y534 153 aaKnown RBP13.46□□□□□ -0.25
CTSD-206ENST00000497544 REG3AQ06141 175 aa13.45□□□□□ -0.26
CTSD-206ENST00000497544 CLPSL2Q6UWE3 100 aa13.45□□□□□ -0.26
CTSD-206ENST00000497544 ENHOQ6UWT2 76 aa13.45□□□□□ -0.26
CTSD-206ENST00000497544 SPANXA1Q9NS26 97 aa13.45□□□□□ -0.26
CTSD-206ENST00000497544 ZNF664Q8N3J9 261 aa13.44□□□□□ -0.26
CTSD-206ENST00000497544 RMI2Q96E14 147 aa13.44□□□□□ -0.26
CTSD-206ENST00000497544 URB1-AS1Q96HZ7 61 aa13.44□□□□□ -0.26
CTSD-206ENST00000497544 CDC42SE2Q9NRR3 84 aa13.44□□□□□ -0.26
CTSD-206ENST00000497544 IGKV3OR2-268A0A0C4DH90 116 aa13.43□□□□□ -0.26
CTSD-206ENST00000497544 PRR34Q9NV39 138 aa13.43□□□□□ -0.26
CTSD-206ENST00000497544 LINC01549A6NIU2 74 aa13.42□□□□□ -0.26
CTSD-206ENST00000497544 MIAQ16674 131 aa13.42□□□□□ -0.26
CTSD-206ENST00000497544 TOMM6Q96B49 74 aa13.42□□□□□ -0.26
CTSD-206ENST00000497544 CHCHD1Q96BP2 118 aaKnown RBP13.42□□□□□ -0.26
CTSD-206ENST00000497544 TM2D2Q9BX73 214 aa13.42□□□□□ -0.26
CTSD-206ENST00000497544 PYGO1Q9Y3Y4 419 aa13.42□□□□□ -0.26
CTSD-206ENST00000497544 IGKV2D-24A0A075B6R9 120 aa13.41□□□□□ -0.26
CTSD-206ENST00000497544 C1orf196B1AJZ1 125 aa13.4□□□□□ -0.26
CTSD-206ENST00000497544 PSCAO43653 123 aa13.4□□□□□ -0.26
CTSD-206ENST00000497544 C1orf43Q9BWL3 253 aa13.4□□□□□ -0.26
CTSD-206ENST00000497544 TRAV8-4A0A0B4J246 113 aa13.39□□□□□ -0.27
CTSD-206ENST00000497544 MRPS36P82909 103 aaKnown RBP13.39□□□□□ -0.27
CTSD-206ENST00000497544 RNASE13Q5GAN3 156 aaKnown RBP13.39□□□□□ -0.27
CTSD-206ENST00000497544 LINC00336Q6ZUF6 198 aa13.39□□□□□ -0.27
CTSD-206ENST00000497544 Q6ZUT4 128 aa13.39□□□□□ -0.27
CTSD-206ENST00000497544 SCGB3A1Q96QR1 104 aa13.39□□□□□ -0.27
CTSD-206ENST00000497544 OPRPNQ99935 248 aaPredicted RBP13.39□□□□□ -0.27
CTSD-206ENST00000497544 COX11Q9Y6N1 276 aa13.39□□□□□ -0.27
CTSD-206ENST00000497544 RTL8CO15255 209 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST1H2BKO60814 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HSBP1O75506 76 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST1H2BJP06899 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST1H2BOP23527 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST1H2BBP33778 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST1H2BDP58876 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST1H2BCP62807 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST2H2BEQ16778 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST1H2BHQ93079 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 TMEM141Q96I45 108 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST1H2BNQ99877 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 HIST1H2BMQ99879 126 aa13.38□□□□□ -0.27
CTSD-206ENST00000497544 IGIPA6NJ69 53 aa13.37□□□□□ -0.27
CTSD-206ENST00000497544 HBDP02042 147 aa13.37□□□□□ -0.27
CTSD-206ENST00000497544 PMCHL1Q16048 86 aa13.37□□□□□ -0.27
CTSD-206ENST00000497544 Q6ZN92 141 aa13.37□□□□□ -0.27
CTSD-206ENST00000497544 Q6ZRN7 208 aaPredicted RBP13.37□□□□□ -0.27
CTSD-206ENST00000497544 ERASQ7Z444 233 aa13.37□□□□□ -0.27
CTSD-206ENST00000497544 IGLV10-54A0A075B6I4 117 aa13.36□□□□□ -0.27
CTSD-206ENST00000497544 NPSP0C0P6 89 aa13.36□□□□□ -0.27
CTSD-206ENST00000497544 SS18Q15532 418 aa13.36□□□□□ -0.27
CTSD-206ENST00000497544 PAPPA-AS1Q5QFB9 102 aa13.36□□□□□ -0.27
CTSD-206ENST00000497544 TIMM17AQ99595 171 aa13.36□□□□□ -0.27
CTSD-206ENST00000497544 IGLV4-3A0A075B6K6 122 aa13.35□□□□□ -0.27
CTSD-206ENST00000497544 LINC00959A0A1B0GUT2 108 aa13.35□□□□□ -0.27
CTSD-206ENST00000497544 SERF1AO75920 110 aa13.35□□□□□ -0.27
CTSD-206ENST00000497544 FAM104AQ969W3 186 aa13.35□□□□□ -0.27
CTSD-206ENST00000497544 VCX2Q9H322 139 aa13.35□□□□□ -0.27
CTSD-206ENST00000497544 A0A096LNJ9 63 aa13.34□□□□□ -0.27
CTSD-206ENST00000497544 TRAV13-1A0A0B4J241 112 aa13.34□□□□□ -0.27
CTSD-206ENST00000497544 TEX43Q6ZNM6 134 aa13.34□□□□□ -0.27
CTSD-206ENST00000497544 CCL25O15444 150 aa13.33□□□□□ -0.28
CTSD-206ENST00000497544 DMBT1Q9UGM3 2413 aaPredicted RBP13.32□□□□□ -0.28
CTSD-206ENST00000497544 PRSS29PA6NIE9 313 aa13.32□□□□□ -0.28
CTSD-206ENST00000497544 IFITM10A6NMD0 228 aa13.32□□□□□ -0.28
CTSD-206ENST00000497544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.32□□□□□ -0.28
CTSD-206ENST00000497544 FAM19A2Q8N3H0 131 aa13.32□□□□□ -0.28
CTSD-206ENST00000497544 CHCHD10Q8WYQ3 142 aaPredicted RBP13.32□□□□□ -0.28
CTSD-206ENST00000497544 C2orf88Q9BSF0 95 aa13.32□□□□□ -0.28
CTSD-206ENST00000497544 LINC00310P59036 64 aa13.31□□□□□ -0.28
CTSD-206ENST00000497544 NUPR1O60356 82 aa13.3□□□□□ -0.28
CTSD-206ENST00000497544 ATP5LO75964 103 aa13.3□□□□□ -0.28
CTSD-206ENST00000497544 NDUFA6P56556 154 aa13.3□□□□□ -0.28
CTSD-206ENST00000497544 TNP2Q05952 138 aa13.3□□□□□ -0.28
CTSD-206ENST00000497544 PDZD11Q5EBL8 140 aa13.3□□□□□ -0.28
CTSD-206ENST00000497544 AMELXQ99217 191 aa13.3□□□□□ -0.28
CTSD-206ENST00000497544 GAGE12HA6NDE8 117 aa13.29□□□□□ -0.28
CTSD-206ENST00000497544 XCL1P47992 114 aa13.29□□□□□ -0.28
CTSD-206ENST00000497544 ZC2HC1BQ5TFG8 222 aa13.29□□□□□ -0.28
CTSD-206ENST00000497544 KRTAP26-1Q6PEX3 210 aa13.29□□□□□ -0.28
CTSD-206ENST00000497544 MAPKAPK5-AS1Q8N8E1 139 aa13.28□□□□□ -0.28
CTSD-206ENST00000497544 BAALCQ8WXS3 180 aa13.28□□□□□ -0.28
CTSD-206ENST00000497544 EREGO14944 169 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms