RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 INO80EQ8NBZ0 244 aaPredicted RBP3.76□□□□□ -1.81
MSH5-219ENST00000497269 AQP10Q96PS8 301 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 TPPP3Q9BW30 176 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 MAP1LC3BQ9GZQ8 125 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 BORCS7-ASMTA0A0B4J1R7 106 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 KRTAP1-4P0C5Y4 121 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 AKR1C3P42330 323 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 RBX1P62877 108 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 Q0VG73 95 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 SPANXN1Q5VSR9 72 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 C2orf66Q6UXQ4 117 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 STOML3Q8TAV4 291 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 HIST1H2BAQ96A08 127 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 DERL1Q9BUN8 251 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 ZFP30Q9Y2G7 519 aa3.75□□□□□ -1.81
MSH5-219ENST00000497269 LINC00862A6NCI5 91 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 A8MU10 97 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 ARPC5O15511 151 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 LTAP01374 205 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 NKX2-5P52952 324 aaPredicted RBP3.74□□□□□ -1.81
MSH5-219ENST00000497269 RAB4BP61018 213 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 DNLZQ5SXM8 178 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 KRTAP26-1Q6PEX3 210 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 SDIM1Q6ZPB5 146 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 C9orf163Q8N9P6 203 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 LYPD6BQ8NI32 183 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 FMC1Q96HJ9 113 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 ZNF471Q9BX82 626 aaPredicted RBP3.74□□□□□ -1.81
MSH5-219ENST00000497269 CYTL1Q9NRR1 136 aa3.74□□□□□ -1.81
MSH5-219ENST00000497269 IGLV4-60A0A075B6I1 120 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 TRBV10-1A0A0K0K1A3 114 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 TRBV6-1A0A0K0K1D8 114 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 SEC11BP0C7V7 166 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 MT1HL1P0DM35 61 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 RAB14P61106 215 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 BAGE2Q86Y30 109 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 SLC7A5P1Q8MH63 180 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 C9orf62Q8N4C0 152 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 FAM213BQ8TBF2 198 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 SFT2D1Q8WV19 159 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 MED9Q9NWA0 146 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 PKHD1L1Q86WI1 4243 aa3.73□□□□□ -1.81
MSH5-219ENST00000497269 TRBV25-1A0A075B6N4 114 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 IGKV2-24A0A0C4DH68 120 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 RAB19A4D1S5 217 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 G3V3Q6 166 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 GIPP09681 153 aaPredicted RBP3.72□□□□□ -1.81
MSH5-219ENST00000497269 SMIM17P0DL12 118 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 CCL20P78556 96 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 REG3AQ06141 175 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 MIAQ16674 131 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 CLLU1Q5K131 121 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 C20orf203Q8NBC4 194 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 LINC00526Q96FQ7 95 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 DPH3P1Q9H4G8 78 aa3.72□□□□□ -1.81
MSH5-219ENST00000497269 IGHV1-24A0A0C4DH33 117 aa3.71□□□□□ -1.82
MSH5-219ENST00000497269 COX6A2Q02221 97 aa3.71□□□□□ -1.82
MSH5-219ENST00000497269 TEX261Q6UWH6 196 aa3.71□□□□□ -1.82
MSH5-219ENST00000497269 KCNRGQ8N5I3 272 aa3.71□□□□□ -1.82
MSH5-219ENST00000497269 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.71□□□□□ -1.82
MSH5-219ENST00000497269 OR2D3Q8NGH3 330 aa3.71□□□□□ -1.82
MSH5-219ENST00000497269 CHCHD7Q9BUK0 85 aa3.71□□□□□ -1.82
MSH5-219ENST00000497269 NKX6-2Q9C056 277 aaPredicted RBP3.71□□□□□ -1.82
MSH5-219ENST00000497269 KIF25-AS1Q9Y6Z4 181 aa3.71□□□□□ -1.82
MSH5-219ENST00000497269 IGHV3-64A0A075B6Q5 118 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 TRAV26-2A0A0B4J265 109 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 A0A0D9SG52 128 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 HMSDA8MTL9 139 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 M0QY20 66 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 SNAI2O43623 268 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 RPL35P42766 123 aaKnown RBP3.7□□□□□ -1.82
MSH5-219ENST00000497269 SULT1A2P50226 295 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 MAJINQ3KP22 176 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 TMEM243Q9BU79 118 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 GNG13Q9P2W3 67 aa3.7□□□□□ -1.82
MSH5-219ENST00000497269 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.69□□□□□ -1.82
MSH5-219ENST00000497269 IGKV2-29A2NJV5 120 aaPredicted RBP3.69□□□□□ -1.82
MSH5-219ENST00000497269 UBE2L6O14933 153 aa3.69□□□□□ -1.82
MSH5-219ENST00000497269 NTF3P20783 257 aa3.69□□□□□ -1.82
MSH5-219ENST00000497269 FOXA3P55318 350 aaPredicted RBP3.69□□□□□ -1.82
MSH5-219ENST00000497269 CENPWQ5EE01 88 aa3.69□□□□□ -1.82
MSH5-219ENST00000497269 LYZL1Q6UWQ5 148 aa3.69□□□□□ -1.82
MSH5-219ENST00000497269 FER1L6-AS1Q8NA97 138 aa3.69□□□□□ -1.82
MSH5-219ENST00000497269 MBD3L1Q8WWY6 194 aa3.69□□□□□ -1.82
MSH5-219ENST00000497269 AP1S3Q96PC3 154 aa3.69□□□□□ -1.82
MSH5-219ENST00000497269 S100A9P06702 114 aaKnown RBP3.68□□□□□ -1.82
MSH5-219ENST00000497269 OR5AL1P0C617 328 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 ZNF345Q14585 488 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 IQCJQ1A5X6 159 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 C9orf129Q5T035 196 aaKnown RBP3.68□□□□□ -1.82
MSH5-219ENST00000497269 RNASEKQ6P5S7 137 aaKnown RBP3.68□□□□□ -1.82
MSH5-219ENST00000497269 RASL11AQ6T310 242 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 Q6ZRU5 148 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 SLC51BQ86UW2 128 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 KRTAP11-1Q8IUC1 163 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 C15orf56Q8N910 161 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 SPACA4Q8TDM5 124 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 RPL39LQ96EH5 51 aaKnown RBP3.68□□□□□ -1.82
MSH5-219ENST00000497269 VAX2Q9UIW0 290 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms