RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 FAM104AQ969W3 186 aa12.39□□□□□ -0.43
RGP1-202ENST00000496906 SCGB3A1Q96QR1 104 aa12.39□□□□□ -0.43
RGP1-202ENST00000496906 C5orf52A6NGY3 159 aa12.39□□□□□ -0.43
RGP1-202ENST00000496906 SNRPEP62304 92 aaKnown RBP12.39□□□□□ -0.43
RGP1-202ENST00000496906 Q6ZUT4 128 aa12.39□□□□□ -0.43
RGP1-202ENST00000496906 IGLV4-3A0A075B6K6 122 aa12.38□□□□□ -0.43
RGP1-202ENST00000496906 LY6G6CO95867 125 aa12.38□□□□□ -0.43
RGP1-202ENST00000496906 MRPS36P82909 103 aaKnown RBP12.38□□□□□ -0.43
RGP1-202ENST00000496906 HIST3H2BBQ8N257 126 aa12.38□□□□□ -0.43
RGP1-202ENST00000496906 OPRPNQ99935 248 aaPredicted RBP12.38□□□□□ -0.43
RGP1-202ENST00000496906 CDC42SE2Q9NRR3 84 aa12.38□□□□□ -0.43
RGP1-202ENST00000496906 LEPROTL1O95214 131 aa12.37□□□□□ -0.43
RGP1-202ENST00000496906 NPSP0C0P6 89 aa12.37□□□□□ -0.43
RGP1-202ENST00000496906 TMEM141Q96I45 108 aa12.37□□□□□ -0.43
RGP1-202ENST00000496906 ANGP03950 147 aaKnown RBP12.36□□□□□ -0.43
RGP1-202ENST00000496906 LINC00173Q6ZV60 143 aa12.36□□□□□ -0.43
RGP1-202ENST00000496906 ZNF664Q8N3J9 261 aa12.36□□□□□ -0.43
RGP1-202ENST00000496906 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.35□□□□□ -0.43
RGP1-202ENST00000496906 ATP5LO75964 103 aa12.35□□□□□ -0.43
RGP1-202ENST00000496906 RNASE13Q5GAN3 156 aaKnown RBP12.35□□□□□ -0.43
RGP1-202ENST00000496906 KLK12Q9UKR0 248 aa12.35□□□□□ -0.43
RGP1-202ENST00000496906 KMT2AQ03164 3969 aa12.35□□□□□ -0.43
RGP1-202ENST00000496906 K7EP13 123 aa12.35□□□□□ -0.43
RGP1-202ENST00000496906 FABP4P15090 132 aa12.35□□□□□ -0.43
RGP1-202ENST00000496906 PACRGQ96M98 296 aaPredicted RBP12.35□□□□□ -0.43
RGP1-202ENST00000496906 HSPB8Q9UJY1 196 aa12.35□□□□□ -0.43
RGP1-202ENST00000496906 LINC00269Q8N2A0 174 aa12.34□□□□□ -0.43
RGP1-202ENST00000496906 C10orf126Q8N4M7 172 aa12.34□□□□□ -0.43
RGP1-202ENST00000496906 KRTAP1-5Q9BYS1 174 aa12.34□□□□□ -0.43
RGP1-202ENST00000496906 TRAV9-2A0A087WT02 112 aa12.33□□□□□ -0.44
RGP1-202ENST00000496906 S100A2P29034 98 aa12.33□□□□□ -0.44
RGP1-202ENST00000496906 PAPPA-AS1Q5QFB9 102 aa12.33□□□□□ -0.44
RGP1-202ENST00000496906 Q6ZN92 141 aa12.33□□□□□ -0.44
RGP1-202ENST00000496906 BAALCQ8WXS3 180 aa12.33□□□□□ -0.44
RGP1-202ENST00000496906 IFI27L1Q96BM0 104 aa12.33□□□□□ -0.44
RGP1-202ENST00000496906 PRR34Q9NV39 138 aa12.33□□□□□ -0.44
RGP1-202ENST00000496906 DNAH6Q9C0G6 4158 aa12.33□□□□□ -0.44
RGP1-202ENST00000496906 NBDYA0A0U1RRE5 68 aa12.32□□□□□ -0.44
RGP1-202ENST00000496906 CLPSL2Q6UWE3 100 aa12.32□□□□□ -0.44
RGP1-202ENST00000496906 AMELXQ99217 191 aa12.32□□□□□ -0.44
RGP1-202ENST00000496906 HIST1H2BLQ99880 126 aa12.32□□□□□ -0.44
RGP1-202ENST00000496906 SACSQ9NZJ4 4579 aa12.32□□□□□ -0.44
RGP1-202ENST00000496906 IFITM10A6NMD0 228 aa12.31□□□□□ -0.44
RGP1-202ENST00000496906 IBA57-AS1B1ANH7 110 aa12.31□□□□□ -0.44
RGP1-202ENST00000496906 REG3AQ06141 175 aa12.31□□□□□ -0.44
RGP1-202ENST00000496906 TTC32Q5I0X7 151 aa12.31□□□□□ -0.44
RGP1-202ENST00000496906 ZC2HC1BQ5TFG8 222 aa12.31□□□□□ -0.44
RGP1-202ENST00000496906 TEX43Q6ZNM6 134 aa12.31□□□□□ -0.44
RGP1-202ENST00000496906 VCX2Q9H322 139 aa12.31□□□□□ -0.44
RGP1-202ENST00000496906 ENHOQ6UWT2 76 aa12.3□□□□□ -0.44
RGP1-202ENST00000496906 UBE2WQ96B02 151 aa12.3□□□□□ -0.44
RGP1-202ENST00000496906 CRPP02741 224 aa12.3□□□□□ -0.44
RGP1-202ENST00000496906 IGKV3OR2-268A0A0C4DH90 116 aa12.29□□□□□ -0.44
RGP1-202ENST00000496906 PMVKQ15126 192 aa12.29□□□□□ -0.44
RGP1-202ENST00000496906 LCE6AA0A183 80 aa12.28□□□□□ -0.44
RGP1-202ENST00000496906 C2orf88Q9BSF0 95 aa12.28□□□□□ -0.44
RGP1-202ENST00000496906 TRAV13-1A0A0B4J241 112 aa12.27□□□□□ -0.44
RGP1-202ENST00000496906 PRSS1P07477 247 aa12.27□□□□□ -0.44
RGP1-202ENST00000496906 MIAQ16674 131 aa12.27□□□□□ -0.44
RGP1-202ENST00000496906 MAP1LC3CQ9BXW4 147 aa12.27□□□□□ -0.44
RGP1-202ENST00000496906 CST9LQ9H4G1 147 aa12.27□□□□□ -0.44
RGP1-202ENST00000496906 LINC00959A0A1B0GUT2 108 aa12.26□□□□□ -0.45
RGP1-202ENST00000496906 PRSS29PA6NIE9 313 aa12.26□□□□□ -0.45
RGP1-202ENST00000496906 Q6ZR54 194 aa12.26□□□□□ -0.45
RGP1-202ENST00000496906 TRAV8-3A0A0A6YYJ7 113 aa12.26□□□□□ -0.45
RGP1-202ENST00000496906 TRAV12-1A0A0B4J245 112 aa12.26□□□□□ -0.45
RGP1-202ENST00000496906 M0R2N4 97 aa12.26□□□□□ -0.45
RGP1-202ENST00000496906 UBE2D1P51668 147 aa12.26□□□□□ -0.45
RGP1-202ENST00000496906 H0Y8G0 127 aa12.25□□□□□ -0.45
RGP1-202ENST00000496906 Q9HAA7 133 aa12.25□□□□□ -0.45
RGP1-202ENST00000496906 KMT2CQ8NEZ4 4911 aaKnown RBP12.25□□□□□ -0.45
RGP1-202ENST00000496906 SYS1-DBNDD2H3BUS1 97 aa12.24□□□□□ -0.45
RGP1-202ENST00000496906 C3orf79P0CE67 100 aa12.24□□□□□ -0.45
RGP1-202ENST00000496906 HYDINQ4G0P3 5121 aa12.23□□□□□ -0.45
RGP1-202ENST00000496906 IGLV10-54A0A075B6I4 117 aa12.23□□□□□ -0.45
RGP1-202ENST00000496906 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
RGP1-202ENST00000496906 SS18Q15532 418 aa12.23□□□□□ -0.45
RGP1-202ENST00000496906 CCL25O15444 150 aa12.22□□□□□ -0.45
RGP1-202ENST00000496906 KRTDAPP60985 99 aa12.22□□□□□ -0.45
RGP1-202ENST00000496906 ODF1Q14990 250 aa12.22□□□□□ -0.45
RGP1-202ENST00000496906 FAM19A3Q7Z5A8 133 aa12.22□□□□□ -0.45
RGP1-202ENST00000496906 SPATA12Q7Z6I5 190 aa12.22□□□□□ -0.45
RGP1-202ENST00000496906 LINC00242Q5T6M2 205 aa12.22□□□□□ -0.45
RGP1-202ENST00000496906 CHCHD10Q8WYQ3 142 aaPredicted RBP12.22□□□□□ -0.45
RGP1-202ENST00000496906 C1orf43Q9BWL3 253 aa12.22□□□□□ -0.45
RGP1-202ENST00000496906 CHTOPQ9Y3Y2 248 aaKnown RBP12.22□□□□□ -0.45
RGP1-202ENST00000496906 IGLV4-69A0A075B6H9 119 aa12.21□□□□□ -0.46
RGP1-202ENST00000496906 IGKV2D-24A0A075B6R9 120 aa12.21□□□□□ -0.46
RGP1-202ENST00000496906 A0A0J9YXV3 536 aa12.21□□□□□ -0.46
RGP1-202ENST00000496906 PET117Q6UWS5 81 aa12.21□□□□□ -0.46
RGP1-202ENST00000496906 DNAH2Q9P225 4427 aa12.2□□□□□ -0.46
RGP1-202ENST00000496906 F8VRH5 84 aa12.2□□□□□ -0.46
RGP1-202ENST00000496906 XCL1P47992 114 aa12.2□□□□□ -0.46
RGP1-202ENST00000496906 KRTAP26-1Q6PEX3 210 aa12.2□□□□□ -0.46
RGP1-202ENST00000496906 OR10D4PQ8NGN7 298 aa12.2□□□□□ -0.46
RGP1-202ENST00000496906 RMI2Q96E14 147 aa12.2□□□□□ -0.46
RGP1-202ENST00000496906 MRPL35Q9NZE8 188 aaKnown RBP12.2□□□□□ -0.46
RGP1-202ENST00000496906 DNAH10Q8IVF4 4471 aa12.19□□□□□ -0.46
RGP1-202ENST00000496906 IGLC3P0DOY3 106 aa12.19□□□□□ -0.46
RGP1-202ENST00000496906 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms