RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 LINC00612Q8N6U2 182 aa11.97□□□□□ -0.49
LMNA-216ENST00000496738 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
LMNA-216ENST00000496738 LYRM9A8MSI8 78 aa11.97□□□□□ -0.49
LMNA-216ENST00000496738 CCDC179H3BU77 68 aa11.96□□□□□ -0.49
LMNA-216ENST00000496738 FOXI1Q12951 378 aa11.96□□□□□ -0.49
LMNA-216ENST00000496738 SLC25A29Q8N8R3 303 aa11.96□□□□□ -0.49
LMNA-216ENST00000496738 NEXN-AS1Q8NBZ9 246 aa11.96□□□□□ -0.49
LMNA-216ENST00000496738 C18orf15Q96N68 181 aa11.96□□□□□ -0.49
LMNA-216ENST00000496738 LINC01545Q5VT33 79 aa11.96□□□□□ -0.5
LMNA-216ENST00000496738 A0A096LNJ9 63 aa11.95□□□□□ -0.5
LMNA-216ENST00000496738 TRBV6-5A0A0K0K1A5 114 aa11.95□□□□□ -0.5
LMNA-216ENST00000496738 MAP1LC3CQ9BXW4 147 aa11.95□□□□□ -0.5
LMNA-216ENST00000496738 PRO0461Q9UI25 63 aa11.95□□□□□ -0.5
LMNA-216ENST00000496738 K7EQD1 137 aa11.95□□□□□ -0.5
LMNA-216ENST00000496738 POLR2KP53803 58 aaKnown RBP11.95□□□□□ -0.5
LMNA-216ENST00000496738 DAD1P61803 113 aa11.95□□□□□ -0.5
LMNA-216ENST00000496738 FHL2Q14192 279 aa11.95□□□□□ -0.5
LMNA-216ENST00000496738 ATP6V0E2Q8NHE4 81 aa11.95□□□□□ -0.5
LMNA-216ENST00000496738 EDA2RQ9HAV5 297 aa11.95□□□□□ -0.5
LMNA-216ENST00000496738 SPART-AS1P0CW21 52 aa11.94□□□□□ -0.5
LMNA-216ENST00000496738 DNHD1Q96M86 4753 aa11.94□□□□□ -0.5
LMNA-216ENST00000496738 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
LMNA-216ENST00000496738 PRSS29PA6NIE9 313 aa11.94□□□□□ -0.5
LMNA-216ENST00000496738 KRTAP21-3Q3LHN1 58 aa11.94□□□□□ -0.5
LMNA-216ENST00000496738 IGHV3-38A0A0C4DH36 116 aa11.93□□□□□ -0.5
LMNA-216ENST00000496738 LINC01546A6NGU7 62 aa11.93□□□□□ -0.5
LMNA-216ENST00000496738 APOMO95445 188 aa11.93□□□□□ -0.5
LMNA-216ENST00000496738 HBDP02042 147 aa11.93□□□□□ -0.5
LMNA-216ENST00000496738 LAGE3Q14657 143 aa11.93□□□□□ -0.5
LMNA-216ENST00000496738 PHLDA1Q8WV24 401 aaPredicted RBP11.93□□□□□ -0.5
LMNA-216ENST00000496738 E9PLD3 99 aa11.92□□□□□ -0.5
LMNA-216ENST00000496738 VCYO14598 125 aa11.92□□□□□ -0.5
LMNA-216ENST00000496738 GAGE13Q4V321 117 aa11.92□□□□□ -0.5
LMNA-216ENST00000496738 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
LMNA-216ENST00000496738 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
LMNA-216ENST00000496738 H3BMG7 143 aa11.91□□□□□ -0.5
LMNA-216ENST00000496738 HTN3P15516 51 aa11.91□□□□□ -0.5
LMNA-216ENST00000496738 TRBV27A0A0K0K1C4 114 aa11.91□□□□□ -0.5
LMNA-216ENST00000496738 NDUFV3P56181 108 aaKnown RBP11.91□□□□□ -0.5
LMNA-216ENST00000496738 KIR2DL4Q99706 377 aa11.91□□□□□ -0.5
LMNA-216ENST00000496738 TM2D3Q9BRN9 247 aa11.9□□□□□ -0.5
LMNA-216ENST00000496738 FCER1GP30273 86 aa11.9□□□□□ -0.5
LMNA-216ENST00000496738 HHLA3Q9XRX5 114 aa11.9□□□□□ -0.5
LMNA-216ENST00000496738 TRBV6-4A0A1B0GX49 114 aa11.89□□□□□ -0.51
LMNA-216ENST00000496738 I3L3M4 83 aa11.89□□□□□ -0.51
LMNA-216ENST00000496738 TSHBP01222 138 aa11.89□□□□□ -0.51
LMNA-216ENST00000496738 TENM3Q9P273 2699 aa11.89□□□□□ -0.51
LMNA-216ENST00000496738 DNAJC30Q96LL9 226 aa11.89□□□□□ -0.51
LMNA-216ENST00000496738 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
LMNA-216ENST00000496738 TRBV7-3A0A075B6L6 115 aa11.88□□□□□ -0.51
LMNA-216ENST00000496738 RPL36AP83881 106 aaKnown RBP11.88□□□□□ -0.51
LMNA-216ENST00000496738 RHOHQ15669 191 aa11.88□□□□□ -0.51
LMNA-216ENST00000496738 ORMDL2Q53FV1 153 aa11.88□□□□□ -0.51
LMNA-216ENST00000496738 RPL36ALQ969Q0 106 aaKnown RBP11.88□□□□□ -0.51
LMNA-216ENST00000496738 A0A1B0GWB2 263 aa11.88□□□□□ -0.51
LMNA-216ENST00000496738 ATP5G1P05496 136 aa11.88□□□□□ -0.51
LMNA-216ENST00000496738 C12orf74Q32Q52 190 aa11.88□□□□□ -0.51
LMNA-216ENST00000496738 C11orf68Q9H3H3 251 aaKnown RBP11.88□□□□□ -0.51
LMNA-216ENST00000496738 A0A0J9YY99 117 aa11.87□□□□□ -0.51
LMNA-216ENST00000496738 TRBV10-1A0A0K0K1A3 114 aa11.87□□□□□ -0.51
LMNA-216ENST00000496738 F5H768 121 aa11.87□□□□□ -0.51
LMNA-216ENST00000496738 PRADC1Q9BSG0 188 aa11.87□□□□□ -0.51
LMNA-216ENST00000496738 C2orf66Q6UXQ4 117 aa11.86□□□□□ -0.51
LMNA-216ENST00000496738 GYPEP15421 78 aa11.85□□□□□ -0.51
LMNA-216ENST00000496738 FXYD2P54710 66 aa11.85□□□□□ -0.51
LMNA-216ENST00000496738 UBE2D3P61077 147 aa11.85□□□□□ -0.51
LMNA-216ENST00000496738 UBE2D2P62837 147 aa11.85□□□□□ -0.51
LMNA-216ENST00000496738 RPL39P62891 51 aaKnown RBP11.85□□□□□ -0.51
LMNA-216ENST00000496738 IFI27L1Q96BM0 104 aa11.85□□□□□ -0.51
LMNA-216ENST00000496738 PRO0255Q9UI72 69 aa11.85□□□□□ -0.51
LMNA-216ENST00000496738 NANOS2P60321 138 aaKnown RBP11.85□□□□□ -0.51
LMNA-216ENST00000496738 NFE4Q86UQ8 179 aa11.85□□□□□ -0.51
LMNA-216ENST00000496738 K7EMI3 77 aa11.84□□□□□ -0.51
LMNA-216ENST00000496738 Q6ZTC4 211 aa11.84□□□□□ -0.51
LMNA-216ENST00000496738 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
LMNA-216ENST00000496738 IGLL5B9A064 214 aa11.84□□□□□ -0.51
LMNA-216ENST00000496738 PAX4O43316 350 aa11.84□□□□□ -0.51
LMNA-216ENST00000496738 TRBV20-1A0A075B6N2 111 aa11.83□□□□□ -0.52
LMNA-216ENST00000496738 A0A096LPF7 62 aa11.83□□□□□ -0.52
LMNA-216ENST00000496738 K7ERJ3 54 aa11.83□□□□□ -0.52
LMNA-216ENST00000496738 TOMM6Q96B49 74 aa11.83□□□□□ -0.52
LMNA-216ENST00000496738 IFITM1P13164 125 aa11.82□□□□□ -0.52
LMNA-216ENST00000496738 C11orf45Q8TAV5 145 aa11.82□□□□□ -0.52
LMNA-216ENST00000496738 VSIG2Q96IQ7 327 aa11.82□□□□□ -0.52
LMNA-216ENST00000496738 GCSHP23434 173 aa11.81□□□□□ -0.52
LMNA-216ENST00000496738 MEIG1Q5JSS6 88 aa11.81□□□□□ -0.52
LMNA-216ENST00000496738 SCGB3A1Q96QR1 104 aa11.81□□□□□ -0.52
LMNA-216ENST00000496738 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
LMNA-216ENST00000496738 GAGE2EQ4V326 116 aa11.81□□□□□ -0.52
LMNA-216ENST00000496738 DAZ4Q86SG3 579 aaKnown RBP11.81□□□□□ -0.52
LMNA-216ENST00000496738 B9D2Q9BPU9 175 aa11.81□□□□□ -0.52
LMNA-216ENST00000496738 DAZ3Q9NR90 486 aaKnown RBP11.81□□□□□ -0.52
LMNA-216ENST00000496738 GAGE2DQ9UEU5 116 aa11.81□□□□□ -0.52
LMNA-216ENST00000496738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
LMNA-216ENST00000496738 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
LMNA-216ENST00000496738 CHCHD7Q9BUK0 85 aa11.8□□□□□ -0.52
LMNA-216ENST00000496738 HIGD1BQ9P298 99 aa11.8□□□□□ -0.52
LMNA-216ENST00000496738 NTM-AS1Q6ZSK4 140 aa11.8□□□□□ -0.52
LMNA-216ENST00000496738 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
LMNA-216ENST00000496738 LINC00694P0DN24 101 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms