RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.01□□□□□ -1.45
U2AF1-212ENST00000496462 IGKV2-29A2NJV5 120 aaPredicted RBP6.01□□□□□ -1.45
U2AF1-212ENST00000496462 TRAV13-1A0A0B4J241 112 aa6.01□□□□□ -1.45
U2AF1-212ENST00000496462 C20orf203Q8NBC4 194 aa6.01□□□□□ -1.45
U2AF1-212ENST00000496462 TIMM21Q9BVV7 248 aa6.01□□□□□ -1.45
U2AF1-212ENST00000496462 ERASQ7Z444 233 aa6□□□□□ -1.45
U2AF1-212ENST00000496462 RNF185Q96GF1 192 aa6□□□□□ -1.45
U2AF1-212ENST00000496462 NACAE9PAV3 2078 aa6□□□□□ -1.45
U2AF1-212ENST00000496462 NBDYA0A0U1RRE5 68 aa6□□□□□ -1.45
U2AF1-212ENST00000496462 REG3AQ06141 175 aa6□□□□□ -1.45
U2AF1-212ENST00000496462 LINC00476Q8WZB0 136 aa6□□□□□ -1.45
U2AF1-212ENST00000496462 NPSP0C0P6 89 aa6□□□□□ -1.45
U2AF1-212ENST00000496462 POLR2KP53803 58 aaKnown RBP6□□□□□ -1.45
U2AF1-212ENST00000496462 RBX1P62877 108 aa6□□□□□ -1.45
U2AF1-212ENST00000496462 C6orf223Q8N319 242 aa5.99□□□□□ -1.45
U2AF1-212ENST00000496462 ZNF664Q8N3J9 261 aa5.99□□□□□ -1.45
U2AF1-212ENST00000496462 UPK3BQ9BT76 320 aa5.99□□□□□ -1.45
U2AF1-212ENST00000496462 LINC00588Q9Y4M8 146 aa5.99□□□□□ -1.45
U2AF1-212ENST00000496462 HERVK_113P63121 156 aa5.99□□□□□ -1.45
U2AF1-212ENST00000496462 C18orf32Q8TCD1 76 aa5.99□□□□□ -1.45
U2AF1-212ENST00000496462 A0A1B0GUV1 79 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 IFI27L1Q96BM0 104 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 TIMM17AQ99595 171 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 MUC4Q99102 2169 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 PMVKQ15126 192 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 Q6ZSN1 163 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 LINC00336Q6ZUF6 198 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 Q8N976 141 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 DEFB104AQ8WTQ1 72 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 COX7A2LO14548 114 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 CKS1BP61024 79 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 LINC00269Q8N2A0 174 aa5.98□□□□□ -1.45
U2AF1-212ENST00000496462 LCE6AA0A183 80 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 COLCA2A8K830 154 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 KRTDAPP60985 99 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 CLPSL2Q6UWE3 100 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 DNAH10OSP0CZ25 163 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 LINC00315P59091 139 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 TMEM170BQ5T4T1 132 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 UFSP1Q6NVU6 142 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 WFDC10BQ8IUB3 73 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 NRACQ8N912 160 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 CBY1Q9Y3M2 126 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 S100A12P80511 92 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 TOMM7Q9P0U1 55 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 PYGO1Q9Y3Y4 419 aa5.97□□□□□ -1.45
U2AF1-212ENST00000496462 CHTOPQ9Y3Y2 248 aaKnown RBP5.96□□□□□ -1.45
U2AF1-212ENST00000496462 DNAH9Q9NYC9 4486 aa5.96□□□□□ -1.46
U2AF1-212ENST00000496462 TSHBP01222 138 aa5.96□□□□□ -1.46
U2AF1-212ENST00000496462 XCL1P47992 114 aa5.96□□□□□ -1.46
U2AF1-212ENST00000496462 C6orf226Q5I0X4 101 aa5.96□□□□□ -1.46
U2AF1-212ENST00000496462 MRPL52Q86TS9 123 aaKnown RBP5.96□□□□□ -1.46
U2AF1-212ENST00000496462 DNAH3Q8TD57 4116 aa5.96□□□□□ -1.46
U2AF1-212ENST00000496462 SFTA2Q6UW10 78 aa5.96□□□□□ -1.46
U2AF1-212ENST00000496462 CSDC2Q9Y534 153 aaKnown RBP5.96□□□□□ -1.46
U2AF1-212ENST00000496462 MRPS36P82909 103 aaKnown RBP5.95□□□□□ -1.46
U2AF1-212ENST00000496462 IGHV1-58A0A0C4DH39 117 aa5.95□□□□□ -1.46
U2AF1-212ENST00000496462 IBA57-AS1B1ANH7 110 aa5.95□□□□□ -1.46
U2AF1-212ENST00000496462 SERF1AO75920 110 aa5.95□□□□□ -1.46
U2AF1-212ENST00000496462 CIRBPQ14011 172 aaKnown RBP5.95□□□□□ -1.46
U2AF1-212ENST00000496462 CDPF1Q6NVV7 123 aa5.95□□□□□ -1.46
U2AF1-212ENST00000496462 COPS9Q8WXC6 57 aa5.95□□□□□ -1.46
U2AF1-212ENST00000496462 TOMM6Q96B49 74 aa5.95□□□□□ -1.46
U2AF1-212ENST00000496462 IGLV10-54A0A075B6I4 117 aa5.94□□□□□ -1.46
U2AF1-212ENST00000496462 GAGE12HA6NDE8 117 aa5.94□□□□□ -1.46
U2AF1-212ENST00000496462 SCGB1D1O95968 90 aa5.94□□□□□ -1.46
U2AF1-212ENST00000496462 MPV17L2Q567V2 206 aa5.94□□□□□ -1.46
U2AF1-212ENST00000496462 CHCHD10Q8WYQ3 142 aaPredicted RBP5.94□□□□□ -1.46
U2AF1-212ENST00000496462 LGALS3P17931 250 aaKnown RBP5.94□□□□□ -1.46
U2AF1-212ENST00000496462 PLNP26678 52 aa5.93□□□□□ -1.46
U2AF1-212ENST00000496462 PET117Q6UWS5 81 aa5.93□□□□□ -1.46
U2AF1-212ENST00000496462 hDV102S1A0JD36 115 aa5.93□□□□□ -1.46
U2AF1-212ENST00000496462 DPM2O94777 84 aa5.93□□□□□ -1.46
U2AF1-212ENST00000496462 SNRPEP62304 92 aaKnown RBP5.93□□□□□ -1.46
U2AF1-212ENST00000496462 PDZD11Q5EBL8 140 aa5.93□□□□□ -1.46
U2AF1-212ENST00000496462 CXCL5P42830 114 aa5.93□□□□□ -1.46
U2AF1-212ENST00000496462 CD164L2Q6UWJ8 174 aa5.93□□□□□ -1.46
U2AF1-212ENST00000496462 PLEKHB2Q96CS7 222 aa5.93□□□□□ -1.46
U2AF1-212ENST00000496462 ESDP10768 282 aa5.92□□□□□ -1.46
U2AF1-212ENST00000496462 MIEN1Q9BRT3 115 aa5.92□□□□□ -1.46
U2AF1-212ENST00000496462 RPL39P62891 51 aaKnown RBP5.92□□□□□ -1.46
U2AF1-212ENST00000496462 MEIG1Q5JSS6 88 aa5.92□□□□□ -1.46
U2AF1-212ENST00000496462 CAMK2N2Q96S95 79 aa5.92□□□□□ -1.46
U2AF1-212ENST00000496462 PMCHL1Q16048 86 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 FAM19A2Q8N3H0 131 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 CHAC1Q9BUX1 264 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 F8WDY8 70 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 NDUFA1O15239 70 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST1H2BKO60814 126 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST1H2BJP06899 126 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST1H2BOP23527 126 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST1H2BBP33778 126 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST1H2BDP58876 126 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST1H2BCP62807 126 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST2H2BEQ16778 126 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.91□□□□□ -1.46
U2AF1-212ENST00000496462 Q6ZUT4 128 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST1H2BHQ93079 126 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST1H2BNQ99877 126 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 HIST1H2BMQ99879 126 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms