RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 TRAV12-3A0A0B4J271 114 aa7.59□□□□□ -1.19
RNF220-217ENST00000496262 TMEM238C9JI98 176 aa7.59□□□□□ -1.19
RNF220-217ENST00000496262 E9PLD3 99 aa7.59□□□□□ -1.19
RNF220-217ENST00000496262 RPL24P83731 157 aaKnown RBP7.59□□□□□ -1.19
RNF220-217ENST00000496262 SPANXN1Q5VSR9 72 aa7.59□□□□□ -1.19
RNF220-217ENST00000496262 C9orf47Q6ZRZ4 202 aa7.59□□□□□ -1.19
RNF220-217ENST00000496262 SMIM2Q9BVW6 85 aa7.59□□□□□ -1.19
RNF220-217ENST00000496262 TTTY13Q9BZ97 58 aa7.59□□□□□ -1.19
RNF220-217ENST00000496262 C11orf21Q9P2W6 132 aa7.59□□□□□ -1.19
RNF220-217ENST00000496262 HSPG2P98160 4391 aa7.59□□□□□ -1.2
RNF220-217ENST00000496262 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.58□□□□□ -1.2
RNF220-217ENST00000496262 H7C1H1 209 aa7.58□□□□□ -1.2
RNF220-217ENST00000496262 ORMDL2Q53FV1 153 aa7.58□□□□□ -1.2
RNF220-217ENST00000496262 ZNF479Q96JC4 524 aa7.58□□□□□ -1.2
RNF220-217ENST00000496262 H3BVH4 76 aa7.57□□□□□ -1.2
RNF220-217ENST00000496262 J3QR89 54 aa7.57□□□□□ -1.2
RNF220-217ENST00000496262 SCGB1A1P11684 91 aa7.57□□□□□ -1.2
RNF220-217ENST00000496262 HIST1H4GQ99525 98 aa7.57□□□□□ -1.2
RNF220-217ENST00000496262 Q9H8V8 135 aa7.57□□□□□ -1.2
RNF220-217ENST00000496262 LENEPQ9Y5L5 61 aa7.57□□□□□ -1.2
RNF220-217ENST00000496262 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
RNF220-217ENST00000496262 TRAV26-2A0A0B4J265 109 aa7.56□□□□□ -1.2
RNF220-217ENST00000496262 F8VRH5 84 aa7.56□□□□□ -1.2
RNF220-217ENST00000496262 F8W1H4 67 aa7.56□□□□□ -1.2
RNF220-217ENST00000496262 Q6ZTI0 123 aa7.56□□□□□ -1.2
RNF220-217ENST00000496262 MAPKAPK5-AS1Q8N8E1 139 aa7.56□□□□□ -1.2
RNF220-217ENST00000496262 KRTAP1-5Q9BYS1 174 aa7.56□□□□□ -1.2
RNF220-217ENST00000496262 CHTOPQ9Y3Y2 248 aaKnown RBP7.56□□□□□ -1.2
RNF220-217ENST00000496262 MYMXA0A1B0GTQ4 84 aa7.55□□□□□ -1.2
RNF220-217ENST00000496262 K7EMI3 77 aa7.55□□□□□ -1.2
RNF220-217ENST00000496262 M0R381 172 aa7.55□□□□□ -1.2
RNF220-217ENST00000496262 ASIPP42127 132 aa7.55□□□□□ -1.2
RNF220-217ENST00000496262 ESRGQ1W209 222 aa7.55□□□□□ -1.2
RNF220-217ENST00000496262 LINC00612Q8N6U2 182 aa7.55□□□□□ -1.2
RNF220-217ENST00000496262 TOMM6Q96B49 74 aa7.55□□□□□ -1.2
RNF220-217ENST00000496262 SCGB3A1Q96QR1 104 aa7.55□□□□□ -1.2
RNF220-217ENST00000496262 C20orf78Q9BR46 151 aa7.55□□□□□ -1.2
RNF220-217ENST00000496262 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
RNF220-217ENST00000496262 LRP1BQ9NZR2 4599 aa7.54□□□□□ -1.2
RNF220-217ENST00000496262 TRGV2A0A075B6R0 118 aa7.54□□□□□ -1.2
RNF220-217ENST00000496262 A0A1B0GWB2 263 aa7.54□□□□□ -1.2
RNF220-217ENST00000496262 TTC32Q5I0X7 151 aa7.54□□□□□ -1.2
RNF220-217ENST00000496262 PRR9Q5T870 116 aa7.54□□□□□ -1.2
RNF220-217ENST00000496262 DPH3P1Q9H4G8 78 aa7.54□□□□□ -1.2
RNF220-217ENST00000496262 MUC4Q99102 2169 aa7.53□□□□□ -1.2
RNF220-217ENST00000496262 TRGV1A0A0A0MS02 117 aa7.53□□□□□ -1.2
RNF220-217ENST00000496262 TRAV21A0A0B4J279 112 aa7.53□□□□□ -1.2
RNF220-217ENST00000496262 CDK2AP2O75956 126 aa7.53□□□□□ -1.2
RNF220-217ENST00000496262 MGPP08493 103 aa7.53□□□□□ -1.2
RNF220-217ENST00000496262 RNASE4P34096 147 aaKnown RBP7.53□□□□□ -1.2
RNF220-217ENST00000496262 LINC00477Q96M19 166 aa7.53□□□□□ -1.2
RNF220-217ENST00000496262 ODF3Q96PU9 254 aa7.53□□□□□ -1.2
RNF220-217ENST00000496262 TMEM238LA0A1B0GVL6 79 aa7.52□□□□□ -1.21
RNF220-217ENST00000496262 A6NJY4 79 aa7.52□□□□□ -1.21
RNF220-217ENST00000496262 PPP1R17O96001 155 aa7.52□□□□□ -1.21
RNF220-217ENST00000496262 S100A4P26447 101 aaKnown RBP7.52□□□□□ -1.21
RNF220-217ENST00000496262 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
RNF220-217ENST00000496262 GAGE13Q4V321 117 aa7.52□□□□□ -1.21
RNF220-217ENST00000496262 NEXN-AS1Q8NBZ9 246 aa7.52□□□□□ -1.21
RNF220-217ENST00000496262 RASL10AQ92737 203 aa7.52□□□□□ -1.21
RNF220-217ENST00000496262 SIGMAR1Q99720 223 aa7.52□□□□□ -1.21
RNF220-217ENST00000496262 IGHV3-53P01767 116 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 KRTAP10-2P60368 255 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 HERVK_113P61574 105 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 DAZ2Q13117 558 aaKnown RBP7.51□□□□□ -1.21
RNF220-217ENST00000496262 WFDC2Q14508 124 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 LYRM7Q5U5X0 104 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 C11orf72Q8NBR9 251 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 BAALCQ8WXS3 180 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 VSIG2Q96IQ7 327 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 PRADC1Q9BSG0 188 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 UPK3BQ9BT76 320 aa7.51□□□□□ -1.21
RNF220-217ENST00000496262 APOBP04114 4563 aaKnown RBP7.51□□□□□ -1.21
RNF220-217ENST00000496262 A0A096LPF7 62 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 GAGE12HA6NDE8 117 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 LINC01549A6NIU2 74 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 KLLNB2CW77 178 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 H3BNG1 76 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 C2orf66Q6UXQ4 117 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 Q6ZQT7 251 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 ZFAND2AQ8N6M9 145 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 RPL39LQ96EH5 51 aaKnown RBP7.5□□□□□ -1.21
RNF220-217ENST00000496262 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
RNF220-217ENST00000496262 PRO0461Q9UI25 63 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 PHLDA3Q9Y5J5 127 aa7.5□□□□□ -1.21
RNF220-217ENST00000496262 ZNF815PA8K554 130 aa7.49□□□□□ -1.21
RNF220-217ENST00000496262 H3BMG7 143 aa7.49□□□□□ -1.21
RNF220-217ENST00000496262 NXPH4O95158 308 aa7.49□□□□□ -1.21
RNF220-217ENST00000496262 LINC00315P59091 139 aa7.49□□□□□ -1.21
RNF220-217ENST00000496262 RPL32P62910 135 aaKnown RBP7.49□□□□□ -1.21
RNF220-217ENST00000496262 ANXA2RQ3ZCQ2 193 aa7.49□□□□□ -1.21
RNF220-217ENST00000496262 PAPPA-AS1Q5QFB9 102 aa7.49□□□□□ -1.21
RNF220-217ENST00000496262 ATP6V0E2Q8NHE4 81 aa7.49□□□□□ -1.21
RNF220-217ENST00000496262 GTSF1LQ9H1H1 148 aa7.49□□□□□ -1.21
RNF220-217ENST00000496262 TRBV7-9A0A0J9YWB2 115 aa7.48□□□□□ -1.21
RNF220-217ENST00000496262 PAX4O43316 350 aa7.48□□□□□ -1.21
RNF220-217ENST00000496262 CIDEAO60543 219 aa7.48□□□□□ -1.21
RNF220-217ENST00000496262 FUSP35637 526 aaKnown RBP eCLIP7.48□□□□□ -1.21
RNF220-217ENST00000496262 SCGB1D4Q6XE38 83 aa7.48□□□□□ -1.21
RNF220-217ENST00000496262 C14orf178Q8N769 122 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms