RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 COX11Q9Y6N1 276 aa9.87□□□□□ -0.83
HDAC9-226ENST00000496026 G0S2P27469 103 aa9.86□□□□□ -0.83
HDAC9-226ENST00000496026 TNP2Q05952 138 aa9.86□□□□□ -0.83
HDAC9-226ENST00000496026 ZNF664Q8N3J9 261 aa9.86□□□□□ -0.83
HDAC9-226ENST00000496026 CDC42SE2Q9NRR3 84 aa9.86□□□□□ -0.83
HDAC9-226ENST00000496026 DNAH6Q9C0G6 4158 aa9.85□□□□□ -0.83
HDAC9-226ENST00000496026 KMT2AQ03164 3969 aa9.85□□□□□ -0.83
HDAC9-226ENST00000496026 RAB5BP61020 215 aa9.85□□□□□ -0.83
HDAC9-226ENST00000496026 C2orf66Q6UXQ4 117 aa9.85□□□□□ -0.83
HDAC9-226ENST00000496026 IGLV10-54A0A075B6I4 117 aa9.84□□□□□ -0.83
HDAC9-226ENST00000496026 TRAV8-4A0A0B4J246 113 aa9.84□□□□□ -0.83
HDAC9-226ENST00000496026 LINC01546A6NGU7 62 aa9.84□□□□□ -0.83
HDAC9-226ENST00000496026 LINC00614P0C842 121 aa9.84□□□□□ -0.83
HDAC9-226ENST00000496026 Q6ZUT4 128 aa9.84□□□□□ -0.83
HDAC9-226ENST00000496026 AP5S1Q9NUS5 200 aa9.84□□□□□ -0.83
HDAC9-226ENST00000496026 RNASE13Q5GAN3 156 aaKnown RBP9.83□□□□□ -0.84
HDAC9-226ENST00000496026 PYGO1Q9Y3Y4 419 aa9.83□□□□□ -0.84
HDAC9-226ENST00000496026 MRPS36P82909 103 aaKnown RBP9.82□□□□□ -0.84
HDAC9-226ENST00000496026 TOMM6Q96B49 74 aa9.82□□□□□ -0.84
HDAC9-226ENST00000496026 OPRPNQ99935 248 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-226ENST00000496026 RYR3Q15413 4870 aa9.82□□□□□ -0.84
HDAC9-226ENST00000496026 EREGO14944 169 aa9.81□□□□□ -0.84
HDAC9-226ENST00000496026 SS18Q15532 418 aa9.81□□□□□ -0.84
HDAC9-226ENST00000496026 BAGE3Q86Y29 109 aa9.81□□□□□ -0.84
HDAC9-226ENST00000496026 URB1-AS1Q96HZ7 61 aa9.81□□□□□ -0.84
HDAC9-226ENST00000496026 IGLV4-3A0A075B6K6 122 aa9.8□□□□□ -0.84
HDAC9-226ENST00000496026 LINC00959A0A1B0GUT2 108 aa9.8□□□□□ -0.84
HDAC9-226ENST00000496026 LINC01549A6NIU2 74 aa9.8□□□□□ -0.84
HDAC9-226ENST00000496026 Q6ZN92 141 aa9.8□□□□□ -0.84
HDAC9-226ENST00000496026 SCGB3A1Q96QR1 104 aa9.8□□□□□ -0.84
HDAC9-226ENST00000496026 A0A087WTM6 91 aa9.79□□□□□ -0.84
HDAC9-226ENST00000496026 TRAV13-1A0A0B4J241 112 aa9.79□□□□□ -0.84
HDAC9-226ENST00000496026 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
HDAC9-226ENST00000496026 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
HDAC9-226ENST00000496026 CHCHD10Q8WYQ3 142 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-226ENST00000496026 CHCHD1Q96BP2 118 aaKnown RBP9.79□□□□□ -0.84
HDAC9-226ENST00000496026 TMEM141Q96I45 108 aa9.79□□□□□ -0.84
HDAC9-226ENST00000496026 GAGE12HA6NDE8 117 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 IGIPA6NJ69 53 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 IFITM10A6NMD0 228 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 LECT2O14960 151 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 CCL25O15444 150 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 NPSP0C0P6 89 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 XCL1P47992 114 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 PMCHL1Q16048 86 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 PAPPA-AS1Q5QFB9 102 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 TEX43Q6ZNM6 134 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 ERASQ7Z444 233 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 FAM104AQ969W3 186 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 TIMM17AQ99595 171 aa9.78□□□□□ -0.84
HDAC9-226ENST00000496026 LRCOL1A6NCL2 159 aa9.77□□□□□ -0.85
HDAC9-226ENST00000496026 C1orf196B1AJZ1 125 aa9.77□□□□□ -0.85
HDAC9-226ENST00000496026 HBDP02042 147 aa9.77□□□□□ -0.85
HDAC9-226ENST00000496026 KRTAP26-1Q6PEX3 210 aa9.77□□□□□ -0.85
HDAC9-226ENST00000496026 C2orf88Q9BSF0 95 aa9.77□□□□□ -0.85
HDAC9-226ENST00000496026 VCX2Q9H322 139 aa9.77□□□□□ -0.85
HDAC9-226ENST00000496026 HSBP1O75506 76 aa9.76□□□□□ -0.85
HDAC9-226ENST00000496026 A0A1B0GVY2 172 aa9.75□□□□□ -0.85
HDAC9-226ENST00000496026 WFDC2Q14508 124 aa9.75□□□□□ -0.85
HDAC9-226ENST00000496026 A0A096LNJ9 63 aa9.74□□□□□ -0.85
HDAC9-226ENST00000496026 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-226ENST00000496026 SERF1AO75920 110 aa9.74□□□□□ -0.85
HDAC9-226ENST00000496026 ZC2HC1BQ5TFG8 222 aa9.74□□□□□ -0.85
HDAC9-226ENST00000496026 CD164L2Q6UWJ8 174 aa9.74□□□□□ -0.85
HDAC9-226ENST00000496026 Q8N814 137 aa9.74□□□□□ -0.85
HDAC9-226ENST00000496026 USP17L23D6RBM5 183 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 FOXI1Q12951 378 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 C14orf177Q52M58 125 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-226ENST00000496026 SPATA12Q7Z6I5 190 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 AMELXQ99217 191 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
HDAC9-226ENST00000496026 ATP5LO75964 103 aa9.72□□□□□ -0.85
HDAC9-226ENST00000496026 PDZD11Q5EBL8 140 aa9.72□□□□□ -0.85
HDAC9-226ENST00000496026 LINC00173Q6ZV60 143 aa9.72□□□□□ -0.85
HDAC9-226ENST00000496026 FAM19A2Q8N3H0 131 aa9.72□□□□□ -0.85
HDAC9-226ENST00000496026 UBE2D1P51668 147 aa9.71□□□□□ -0.86
HDAC9-226ENST00000496026 NDUFA6P56556 154 aa9.71□□□□□ -0.86
HDAC9-226ENST00000496026 KRTAP10-2P60368 255 aa9.71□□□□□ -0.86
HDAC9-226ENST00000496026 CFAP161Q6P656 301 aa9.71□□□□□ -0.86
HDAC9-226ENST00000496026 PGPEP1Q9NXJ5 209 aa9.71□□□□□ -0.86
HDAC9-226ENST00000496026 DNAH2Q9P225 4427 aa9.71□□□□□ -0.86
HDAC9-226ENST00000496026 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-226ENST00000496026 COX7A2LO14548 114 aa9.7□□□□□ -0.86
HDAC9-226ENST00000496026 MALP21145 153 aa9.7□□□□□ -0.86
HDAC9-226ENST00000496026 LINC00310P59036 64 aa9.7□□□□□ -0.86
HDAC9-226ENST00000496026 NUPR1O60356 82 aa9.69□□□□□ -0.86
HDAC9-226ENST00000496026 FUSP35637 526 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC9-226ENST00000496026 PMVKQ15126 192 aa9.69□□□□□ -0.86
HDAC9-226ENST00000496026 LINC00242Q5T6M2 205 aa9.69□□□□□ -0.86
HDAC9-226ENST00000496026 C5orf38Q86SI9 138 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms